RNA–Protein interactions for RNA: ENST00000397163.7

CAPN3-206, Transcript of calpain 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CAPN3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-206ENST00000397163 FAM216AQ8WUB2 273 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 DEFB127Q9H1M4 99 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 FZR1Q9UM11 496 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 KMT2EQ8IZD2 1858 aa7.55□□□□□ -1.2
CAPN3-206ENST00000397163 KNTC1P50748 2209 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 M0R2Z0 102 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 OR7C2O60412 319 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 TNFSF15O95150 251 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 AMY1AP04745 511 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 TCTAP57738 103 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 SMIM21Q3B7S5 101 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 COX19Q49B96 90 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 WDR82Q6UXN9 313 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 ZNF439Q8NDP4 499 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 CXXC4Q9H2H0 198 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 TMEM167BQ9NRX6 74 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 ZNF318Q5VUA4 2279 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 A0A087X0K7 114 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 SAA2-SAA4A0A096LPE2 208 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 C15orf65H3BRN8 121 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 DLL1O00548 723 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 TIMM8AO60220 97 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-206ENST00000397163 HLA-DQA1P01909 254 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 APCSP02743 223 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 SP1P08047 785 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 AREGP15514 252 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 MEOX1P50221 254 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 ARG2P78540 354 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 FOXE3Q13461 319 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 PRR7Q8TB68 274 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 OSTCQ9NRP0 149 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 TRAV9-2A0A087WT02 112 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 HSBP1O75506 76 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 UQCRFS1P47985 274 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 RHOGP84095 191 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 SLAQ13239 276 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 LRRC10Q5BKY1 277 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 IBA57Q5T440 356 aaKnown RBP7.54□□□□□ -1.2
CAPN3-206ENST00000397163 OR1N2Q8NGR9 330 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 SVIPQ8NHG7 77 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 PMCHL2Q9BQD1 86 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 SSBP3Q9BWW4 388 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-206ENST00000397163 FNDC4Q9H6D8 234 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-206ENST00000397163 ZNF331Q9NQX6 463 aaPredicted RBP7.54□□□□□ -1.2
CAPN3-206ENST00000397163 CDC42EP3Q9UKI2 254 aa7.54□□□□□ -1.2
CAPN3-206ENST00000397163 OR10J4P0C629 311 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 FABP6P51161 128 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 TRAT1Q6PIZ9 186 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 SMIM12Q96EX1 92 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 NABP2Q9BQ15 211 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 SSBP4Q9BWG4 385 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-206ENST00000397163 FAM181BA6NEQ2 426 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 AHRRA9YTQ3 701 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 CORTO00230 105 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 TOX4O94842 621 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 USF1P22415 310 aaPredicted RBP7.53□□□□□ -1.2
CAPN3-206ENST00000397163 CD24P25063 80 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 BVES-AS1Q5T3Y7 98 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 C19orf35Q6ZS72 473 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 CD177Q8N6Q3 437 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 LRRC29Q8WV35 223 aa7.53□□□□□ -1.2
CAPN3-206ENST00000397163 TECRQ9NZ01 308 aaKnown RBP7.53□□□□□ -1.2
CAPN3-206ENST00000397163 TRGV8A0A0C4DH27 118 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 C15orf61A6NNL5 157 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 ISLRO14498 428 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 PRDX2P32119 198 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 PRR20EP86478 221 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 PRR20CP86479 221 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 PRR20DP86480 221 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 PRR20BP86481 221 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 PRR20AP86496 221 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 LINC00173Q6ZV60 143 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 OR4S2Q8NH73 311 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 OR8B2Q96RD0 313 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 SLC25A10Q9UBX3 287 aaPredicted RBP7.52□□□□□ -1.21
CAPN3-206ENST00000397163 JPT1Q9UK76 154 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 LINC00869P0C866 280 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 MYOD1P15172 320 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 IGHV1-2P23083 117 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 HSPE1P61604 102 aaKnown RBP7.52□□□□□ -1.21
CAPN3-206ENST00000397163 RPL8P62917 257 aaKnown RBP7.52□□□□□ -1.21
CAPN3-206ENST00000397163 LEAP2Q969E1 77 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 DUSP13Q9UII6 198 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 PPIAL4DF5H284 164 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 AGFG2O95081 481 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 ZNF134P52741 427 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 OR1B1Q8NGR6 318 aa7.52□□□□□ -1.21
CAPN3-206ENST00000397163 HCFC1P51610 2035 aa7.51□□□□□ -1.21
CAPN3-206ENST00000397163 OR4C46A6NHA9 309 aa7.51□□□□□ -1.21
CAPN3-206ENST00000397163 GGTLC3B5MD39 225 aa7.51□□□□□ -1.21
CAPN3-206ENST00000397163 UBE2G1P62253 170 aa7.51□□□□□ -1.21
CAPN3-206ENST00000397163 MOB3BQ86TA1 216 aa7.51□□□□□ -1.21
CAPN3-206ENST00000397163 OR2T6Q8NHC8 308 aa7.51□□□□□ -1.21
CAPN3-206ENST00000397163 C18orf32Q8TCD1 76 aa7.51□□□□□ -1.21
CAPN3-206ENST00000397163 CHRDL1Q9BU40 450 aa7.51□□□□□ -1.21
CAPN3-206ENST00000397163 IFI27L2Q9H2X8 130 aa7.51□□□□□ -1.21
CAPN3-206ENST00000397163 IZUMO1RA6ND01 250 aa7.51□□□□□ -1.21
CAPN3-206ENST00000397163 KLRC4-KLRK1H3BQV0 150 aa7.51□□□□□ -1.21
CAPN3-206ENST00000397163 CER1O95813 267 aa7.51□□□□□ -1.21
CAPN3-206ENST00000397163 REG1AP05451 166 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms