RNA–Protein interactions for RNA: ENST00000397102.5

SEC13-206, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-206ENST00000397102 TOMM20LQ6UXN7 152 aa10.74□□□□□ -0.69
SEC13-206ENST00000397102 MISP3Q96FF7 219 aa10.74□□□□□ -0.69
SEC13-206ENST00000397102 GRAMD2BQ96HH9 432 aa10.74□□□□□ -0.69
SEC13-206ENST00000397102 DUSP21Q9H596 190 aa10.74□□□□□ -0.69
SEC13-206ENST00000397102 CLEC5AQ9NY25 188 aa10.74□□□□□ -0.69
SEC13-206ENST00000397102 NSG2Q9Y328 171 aa10.74□□□□□ -0.69
SEC13-206ENST00000397102 TPRKBQ9Y3C4 175 aa10.74□□□□□ -0.69
SEC13-206ENST00000397102 IGHV3-66A0A0C4DH42 116 aa10.73□□□□□ -0.69
SEC13-206ENST00000397102 K7EQG2 157 aa10.73□□□□□ -0.69
SEC13-206ENST00000397102 SNAPC5O75971 98 aa10.73□□□□□ -0.69
SEC13-206ENST00000397102 MT-CO2P00403 227 aa10.73□□□□□ -0.69
SEC13-206ENST00000397102 OGFRL1Q5TC84 451 aaPredicted RBP10.73□□□□□ -0.69
SEC13-206ENST00000397102 C1orf134Q5TEV5 83 aa10.73□□□□□ -0.69
SEC13-206ENST00000397102 BORCS5Q969J3 196 aa10.73□□□□□ -0.69
SEC13-206ENST00000397102 TMEM231Q9H6L2 316 aa10.73□□□□□ -0.69
SEC13-206ENST00000397102 FKBP11Q9NYL4 201 aa10.73□□□□□ -0.69
SEC13-206ENST00000397102 PRNDQ9UKY0 176 aa10.73□□□□□ -0.69
SEC13-206ENST00000397102 KNCNA6PVL3 124 aa10.72□□□□□ -0.69
SEC13-206ENST00000397102 C16orf90A8MZG2 172 aa10.72□□□□□ -0.69
SEC13-206ENST00000397102 F2RP25116 425 aa10.72□□□□□ -0.69
SEC13-206ENST00000397102 TMEM17Q86X19 198 aa10.72□□□□□ -0.69
SEC13-206ENST00000397102 HOGA1Q86XE5 327 aa10.72□□□□□ -0.69
SEC13-206ENST00000397102 ZFAND3Q9H8U3 227 aa10.72□□□□□ -0.69
SEC13-206ENST00000397102 NACAE9PAV3 2078 aa10.72□□□□□ -0.69
SEC13-206ENST00000397102 KRASP01116 189 aa10.71□□□□□ -0.69
SEC13-206ENST00000397102 IGHV3-48P01763 117 aa10.71□□□□□ -0.69
SEC13-206ENST00000397102 ZNF688P0C7X2 276 aa10.71□□□□□ -0.69
SEC13-206ENST00000397102 G6PCP35575 357 aa10.71□□□□□ -0.69
SEC13-206ENST00000397102 RNF212Q495C1 297 aa10.71□□□□□ -0.69
SEC13-206ENST00000397102 ACTL10Q5JWF8 245 aa10.71□□□□□ -0.69
SEC13-206ENST00000397102 ZNF600Q6ZNG1 722 aa10.71□□□□□ -0.69
SEC13-206ENST00000397102 TPRA1Q86W33 373 aa10.71□□□□□ -0.69
SEC13-206ENST00000397102 ZNF114Q8NC26 417 aa10.71□□□□□ -0.69
SEC13-206ENST00000397102 STXBP6Q8NFX7 210 aa10.71□□□□□ -0.69
SEC13-206ENST00000397102 FCAMRQ8WWV6 532 aa10.71□□□□□ -0.69
SEC13-206ENST00000397102 FAM210BQ96KR6 192 aa10.71□□□□□ -0.69
SEC13-206ENST00000397102 PUS1Q9Y606 427 aaKnown RBP eCLIP10.71□□□□□ -0.69
SEC13-206ENST00000397102 LRP1BQ9NZR2 4599 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 TRDV1A0A1B0GX56 115 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 A0A1W2PS18 150 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 SMIM30A4D0T7 59 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 DBX1A6NMT0 343 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 NOTOA8MTQ0 251 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 RLN1P04808 185 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 GNRHRP30968 328 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 LPAR6P43657 344 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 PRSS48Q7RTY5 328 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 Q8N1X5 172 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 PINX1Q96BK5 328 aaKnown RBP10.7□□□□□ -0.7
SEC13-206ENST00000397102 TSC22D3Q99576 134 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 VCXQ9H320 206 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 NDUFB11Q9NX14 153 aa10.7□□□□□ -0.7
SEC13-206ENST00000397102 NPBWR1P48145 328 aa10.69□□□□□ -0.7
SEC13-206ENST00000397102 C22orf42Q6IC83 251 aa10.69□□□□□ -0.7
SEC13-206ENST00000397102 TSPAN14Q8NG11 270 aa10.69□□□□□ -0.7
SEC13-206ENST00000397102 DCANP1Q8TF63 244 aa10.69□□□□□ -0.7
SEC13-206ENST00000397102 C1QTNF4Q9BXJ3 329 aa10.69□□□□□ -0.7
SEC13-206ENST00000397102 A0A1B0GU03 582 aa10.68□□□□□ -0.7
SEC13-206ENST00000397102 PGLYRP1O75594 196 aaPredicted RBP10.68□□□□□ -0.7
SEC13-206ENST00000397102 SPART-AS1P0CW21 52 aa10.68□□□□□ -0.7
SEC13-206ENST00000397102 NPPCP23582 126 aa10.68□□□□□ -0.7
SEC13-206ENST00000397102 HERV-K104P61576 105 aa10.68□□□□□ -0.7
SEC13-206ENST00000397102 TBCEQ15813 527 aaPredicted RBP10.68□□□□□ -0.7
SEC13-206ENST00000397102 ZNF367Q7RTV3 350 aa10.68□□□□□ -0.7
SEC13-206ENST00000397102 OR5AP2Q8NGF4 316 aa10.68□□□□□ -0.7
SEC13-206ENST00000397102 LGALS14Q8TCE9 139 aa10.68□□□□□ -0.7
SEC13-206ENST00000397102 MOB3AQ96BX8 217 aa10.68□□□□□ -0.7
SEC13-206ENST00000397102 RHBDL2Q9NX52 303 aa10.68□□□□□ -0.7
SEC13-206ENST00000397102 FGF9P31371 208 aaPredicted RBP10.67□□□□□ -0.7
SEC13-206ENST00000397102 P2RY1P47900 373 aa10.67□□□□□ -0.7
SEC13-206ENST00000397102 NUTF2P61970 127 aaKnown RBP10.67□□□□□ -0.7
SEC13-206ENST00000397102 PRCDQ00LT1 54 aa10.67□□□□□ -0.7
SEC13-206ENST00000397102 TNP2Q05952 138 aa10.67□□□□□ -0.7
SEC13-206ENST00000397102 KCTD21Q4G0X4 260 aa10.67□□□□□ -0.7
SEC13-206ENST00000397102 METTL26Q96S19 204 aa10.67□□□□□ -0.7
SEC13-206ENST00000397102 RAB40CQ96S21 281 aa10.67□□□□□ -0.7
SEC13-206ENST00000397102 DAPK2Q9UIK4 370 aa10.67□□□□□ -0.7
SEC13-206ENST00000397102 TRAV18A0A075B6X5 111 aa10.66□□□□□ -0.7
SEC13-206ENST00000397102 TMEM189A5PLL7 270 aa10.66□□□□□ -0.7
SEC13-206ENST00000397102 TMEM50AO95807 157 aa10.66□□□□□ -0.7
SEC13-206ENST00000397102 FCER2P06734 321 aa10.66□□□□□ -0.7
SEC13-206ENST00000397102 CRYBB3P26998 211 aa10.66□□□□□ -0.7
SEC13-206ENST00000397102 NEU1Q99519 415 aa10.66□□□□□ -0.7
SEC13-206ENST00000397102 XCL2Q9UBD3 114 aa10.66□□□□□ -0.7
SEC13-206ENST00000397102 CBX5P45973 191 aa10.65□□□□□ -0.7
SEC13-206ENST00000397102 ERHP84090 104 aaKnown RBP10.65□□□□□ -0.7
SEC13-206ENST00000397102 PSMG4Q5JS54 123 aa10.65□□□□□ -0.7
SEC13-206ENST00000397102 CMTM1Q8IZ96 169 aa10.65□□□□□ -0.7
SEC13-206ENST00000397102 OR4A16Q8NH70 328 aa10.65□□□□□ -0.7
SEC13-206ENST00000397102 NARS2Q96I59 477 aaKnown RBP10.65□□□□□ -0.7
SEC13-206ENST00000397102 RNF167Q9H6Y7 350 aa10.65□□□□□ -0.7
SEC13-206ENST00000397102 HERC1Q15751 4861 aa10.64□□□□□ -0.71
SEC13-206ENST00000397102 A0A0A6YYH2 397 aa10.64□□□□□ -0.71
SEC13-206ENST00000397102 TEX48A0A1B0GUV7 120 aa10.64□□□□□ -0.71
SEC13-206ENST00000397102 HELTA6NFD8 242 aa10.64□□□□□ -0.71
SEC13-206ENST00000397102 A6NJ64 397 aa10.64□□□□□ -0.71
SEC13-206ENST00000397102 EIF2B2P49770 351 aaKnown RBP10.64□□□□□ -0.71
SEC13-206ENST00000397102 FAM3BP58499 235 aaPredicted RBP10.64□□□□□ -0.71
SEC13-206ENST00000397102 DHRS2Q13268 280 aa10.64□□□□□ -0.71
SEC13-206ENST00000397102 SFXN4Q6P4A7 337 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms