RNA–Protein interactions for RNA: ENST00000396859.5

GAPDH-204, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-204ENST00000396859 SLC24A4Q8NFF2 622 aa10.56□□□□□ -0.72
GAPDH-204ENST00000396859 PINX1Q96BK5 328 aaKnown RBP10.56□□□□□ -0.72
GAPDH-204ENST00000396859 CIB3Q96Q77 187 aaPredicted RBP10.56□□□□□ -0.72
GAPDH-204ENST00000396859 MCRIP2Q9BUT9 160 aaKnown RBP10.56□□□□□ -0.72
GAPDH-204ENST00000396859 ANK2Q01484 3957 aa10.56□□□□□ -0.72
GAPDH-204ENST00000396859 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.55□□□□□ -0.72
GAPDH-204ENST00000396859 IGHV3-23P01764 117 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 RNASE2P10153 161 aaKnown RBP10.55□□□□□ -0.72
GAPDH-204ENST00000396859 NPY1RP25929 384 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 NKX2-1P43699 371 aaPredicted RBP10.55□□□□□ -0.72
GAPDH-204ENST00000396859 MFAP2P55001 183 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 RPP30P78346 268 aaKnown RBP10.55□□□□□ -0.72
GAPDH-204ENST00000396859 FHL3Q13643 280 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 RGS21Q2M5E4 152 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 RPEL1Q2QD12 228 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 CLEC19AQ6UXS0 136 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 GSG1LQ6UXU4 331 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 RCC1LQ96I51 464 aaKnown RBP10.55□□□□□ -0.72
GAPDH-204ENST00000396859 GPR61Q9BZJ8 451 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 GAR1Q9NY12 217 aaKnown RBP10.55□□□□□ -0.72
GAPDH-204ENST00000396859 GSKIPQ9P0R6 139 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 DMRT1Q9Y5R6 373 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 S4R3C0 116 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 U3KQ87 197 aa10.55□□□□□ -0.72
GAPDH-204ENST00000396859 RPS10-NUDT3A0A1W2PQS6 291 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 MFSD2BA6NFX1 497 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 MPTX1A8MV57 137 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 CCSO14618 274 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 SYNGR2O43760 224 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 GGCTO75223 188 aaKnown RBP10.54□□□□□ -0.72
GAPDH-204ENST00000396859 SCGB1D2O95969 90 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 HOXD3P31249 432 aaPredicted RBP10.54□□□□□ -0.72
GAPDH-204ENST00000396859 ARL3P36405 182 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 MFAP4P55083 255 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 ATP5IP56385 69 aaPredicted RBP10.54□□□□□ -0.72
GAPDH-204ENST00000396859 C2orf83Q53S99 150 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 Q56UQ5 140 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 ZBTB8BQ8NAP8 495 aaPredicted RBP10.54□□□□□ -0.72
GAPDH-204ENST00000396859 WFDC9Q8NEX5 89 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 ATP6V0BQ99437 205 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 C21orf62Q9NYP8 219 aa10.54□□□□□ -0.72
GAPDH-204ENST00000396859 IGHV3-21A0A0B4J1V1 117 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 OVOL1O14753 267 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 SSNA1O43805 119 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 SCGB2A1O75556 95 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 MT-CO2P00403 227 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 IAPPP10997 89 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 SPNP16150 400 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 GPR183P32249 361 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 OPRK1P41145 380 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 SLURP1P55000 103 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 RAB11AP62491 216 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 BSXQ3C1V8 233 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 UBAC2Q8NBM4 344 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 OR4D5Q8NGN0 318 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 ZNF502Q8TBZ5 544 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 RNASEH2CQ8TDP1 164 aaKnown RBP10.53□□□□□ -0.72
GAPDH-204ENST00000396859 SCARB1Q8WTV0 552 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 DCUN1D4Q92564 292 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 OR10C1Q96KK4 312 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 CCDC140Q96MF4 163 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 MAGT1Q9H0U3 335 aa10.53□□□□□ -0.72
GAPDH-204ENST00000396859 PAIP2BQ9ULR5 123 aaKnown RBP10.53□□□□□ -0.72
GAPDH-204ENST00000396859 K7EIM0 57 aa10.52□□□□□ -0.73
GAPDH-204ENST00000396859 TRBV12-3P01733 135 aa10.52□□□□□ -0.73
GAPDH-204ENST00000396859 IFNA4P05014 189 aa10.52□□□□□ -0.73
GAPDH-204ENST00000396859 CLEC3BP05452 202 aa10.52□□□□□ -0.73
GAPDH-204ENST00000396859 NPBWR1P48145 328 aa10.52□□□□□ -0.73
GAPDH-204ENST00000396859 ID3Q02535 119 aa10.52□□□□□ -0.73
GAPDH-204ENST00000396859 ETFRF1Q6IPR1 90 aa10.52□□□□□ -0.73
GAPDH-204ENST00000396859 ACSM6Q6P461 480 aa10.52□□□□□ -0.73
GAPDH-204ENST00000396859 SPSB3Q6PJ21 355 aa10.52□□□□□ -0.73
GAPDH-204ENST00000396859 DLX4Q92988 240 aaPredicted RBP10.52□□□□□ -0.73
GAPDH-204ENST00000396859 BSCL2Q96G97 398 aaPredicted RBP10.52□□□□□ -0.73
GAPDH-204ENST00000396859 C2orf50Q96LR7 162 aa10.52□□□□□ -0.73
GAPDH-204ENST00000396859 TXN2Q99757 166 aa10.52□□□□□ -0.73
GAPDH-204ENST00000396859 ELOVL1Q9BW60 279 aa10.52□□□□□ -0.73
GAPDH-204ENST00000396859 OR2T8A6NH00 312 aa10.51□□□□□ -0.73
GAPDH-204ENST00000396859 PPP5D1E7EU14 171 aa10.51□□□□□ -0.73
GAPDH-204ENST00000396859 I3L2K1 104 aa10.51□□□□□ -0.73
GAPDH-204ENST00000396859 BMPR1BO00238 502 aa10.51□□□□□ -0.73
GAPDH-204ENST00000396859 GOSR2O14653 212 aa10.51□□□□□ -0.73
GAPDH-204ENST00000396859 SSSCA1O60232 199 aa10.51□□□□□ -0.73
GAPDH-204ENST00000396859 GNG7O60262 68 aa10.51□□□□□ -0.73
GAPDH-204ENST00000396859 POLR2GP62487 172 aaKnown RBP eCLIP10.51□□□□□ -0.73
GAPDH-204ENST00000396859 FAM106AQ4KMX7 169 aa10.51□□□□□ -0.73
GAPDH-204ENST00000396859 PVRIGQ6DKI7 326 aa10.51□□□□□ -0.73
GAPDH-204ENST00000396859 C1QL4Q86Z23 238 aa10.51□□□□□ -0.73
GAPDH-204ENST00000396859 STRAPQ9Y3F4 350 aaKnown RBP10.51□□□□□ -0.73
GAPDH-204ENST00000396859 SEC14L6B5MCN3 397 aa10.5□□□□□ -0.73
GAPDH-204ENST00000396859 L7N2F9 121 aa10.5□□□□□ -0.73
GAPDH-204ENST00000396859 NUPL2O15504 423 aaKnown RBP10.5□□□□□ -0.73
GAPDH-204ENST00000396859 TGOLN2O43493 480 aa10.5□□□□□ -0.73
GAPDH-204ENST00000396859 SLC25A4P12235 298 aa10.5□□□□□ -0.73
GAPDH-204ENST00000396859 IGLL1P15814 213 aa10.5□□□□□ -0.73
GAPDH-204ENST00000396859 PVALBP20472 110 aaPredicted RBP10.5□□□□□ -0.73
GAPDH-204ENST00000396859 SYNJ2BPP57105 145 aa10.5□□□□□ -0.73
GAPDH-204ENST00000396859 VAMP2P63027 116 aa10.5□□□□□ -0.73
GAPDH-204ENST00000396859 SPANXN5Q5MJ07 72 aa10.5□□□□□ -0.73
GAPDH-204ENST00000396859 C9orf66Q5T8R8 295 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms