RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 FANCD2OSQ96PS1 177 aa12.25□□□□□ -0.45
CLTA-203ENST00000396603 OR51B2Q9Y5P1 312 aa12.25□□□□□ -0.45
CLTA-203ENST00000396603 TRAV25A0A0B4J276 109 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 C15orf61A6NNL5 157 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 PPP5D1E7EU14 171 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 OR2C1O95371 312 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 TRAPPC2P0DI81 140 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 TRAPPC2BP0DI82 140 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 ARL3P36405 182 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 OR2B8PP59922 312 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 GUCA2BQ16661 112 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 LGI3Q8N145 548 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 CCDC140Q96MF4 163 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 TMEM56Q96MV1 263 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 PDCD10Q9BUL8 212 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 RETNQ9HD89 108 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 TMEM14BQ9NUH8 114 aa12.24□□□□□ -0.45
CLTA-203ENST00000396603 TMEM213A2RRL7 107 aa12.23□□□□□ -0.45
CLTA-203ENST00000396603 HMX3A6NHT5 357 aa12.23□□□□□ -0.45
CLTA-203ENST00000396603 UPK1BO75841 260 aa12.23□□□□□ -0.45
CLTA-203ENST00000396603 IGKV1-39P01597 117 aa12.23□□□□□ -0.45
CLTA-203ENST00000396603 IGKV1D-39P04432 117 aa12.23□□□□□ -0.45
CLTA-203ENST00000396603 VAMP1P23763 118 aa12.23□□□□□ -0.45
CLTA-203ENST00000396603 CCR6P51684 374 aa12.23□□□□□ -0.45
CLTA-203ENST00000396603 ELLP55199 621 aaPredicted RBP12.23□□□□□ -0.45
CLTA-203ENST00000396603 TMEM268Q5VZI3 342 aa12.23□□□□□ -0.45
CLTA-203ENST00000396603 TMEM230Q96A57 120 aa12.23□□□□□ -0.45
CLTA-203ENST00000396603 WDR89Q96FK6 387 aaPredicted RBP12.23□□□□□ -0.45
CLTA-203ENST00000396603 TMEM56-RWDD3S4R434 201 aa12.23□□□□□ -0.45
CLTA-203ENST00000396603 IGLV11-55A0A075B6I3 123 aa12.22□□□□□ -0.45
CLTA-203ENST00000396603 TRAV3A0A0B4J244 114 aa12.22□□□□□ -0.45
CLTA-203ENST00000396603 DUXBA0A1W2PPF3 345 aa12.22□□□□□ -0.45
CLTA-203ENST00000396603 C8orf88P0DMB2 117 aa12.22□□□□□ -0.45
CLTA-203ENST00000396603 DEFA4P12838 97 aa12.22□□□□□ -0.45
CLTA-203ENST00000396603 TMEM187Q14656 261 aa12.22□□□□□ -0.45
CLTA-203ENST00000396603 CLEC19AQ6UXS0 136 aa12.22□□□□□ -0.45
CLTA-203ENST00000396603 TMEM61Q8N0U2 210 aa12.22□□□□□ -0.45
CLTA-203ENST00000396603 LSM10Q969L4 123 aaKnown RBP12.22□□□□□ -0.45
CLTA-203ENST00000396603 FAM110AQ9BQ89 295 aa12.22□□□□□ -0.45
CLTA-203ENST00000396603 GGTLC1Q9BX51 225 aa12.22□□□□□ -0.45
CLTA-203ENST00000396603 THYN1Q9P016 225 aa12.22□□□□□ -0.45
CLTA-203ENST00000396603 TEX50A0A1B0GTY4 177 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 A0A1B0GW64 132 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 E7EUB6 86 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 PLA2G10O15496 165 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 NDUFB8O95169 186 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 IGKV1-5P01602 117 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 HLA-AP01891 365 aaKnown RBP12.21□□□□□ -0.45
CLTA-203ENST00000396603 DEFA1P59665 94 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 DEFA3P59666 94 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 ASAH1Q13510 395 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 SELENOHQ8IZQ5 122 aaKnown RBP12.21□□□□□ -0.45
CLTA-203ENST00000396603 OR52B4Q8NGK2 314 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 OR1L6Q8NGR2 347 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 ATP6V0BQ99437 205 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 HINT2Q9BX68 163 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 NDUFA4L2Q9NRX3 87 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 MRPL27Q9P0M9 148 aaKnown RBP12.21□□□□□ -0.45
CLTA-203ENST00000396603 TP53TG1Q9Y2A0 90 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 NSG2Q9Y328 171 aa12.21□□□□□ -0.45
CLTA-203ENST00000396603 LOC102724200A0A096LPH7 203 aaPredicted RBP12.2□□□□□ -0.46
CLTA-203ENST00000396603 A0A0B4J2A0 478 aa12.2□□□□□ -0.46
CLTA-203ENST00000396603 FAM240BA0A1B0GVZ2 78 aa12.2□□□□□ -0.46
CLTA-203ENST00000396603 P0C879 139 aa12.2□□□□□ -0.46
CLTA-203ENST00000396603 MYOD1P15172 320 aa12.2□□□□□ -0.46
CLTA-203ENST00000396603 AREGP15514 252 aa12.2□□□□□ -0.46
CLTA-203ENST00000396603 ATF4P18848 351 aaPredicted RBP12.2□□□□□ -0.46
CLTA-203ENST00000396603 HSPE1P61604 102 aaKnown RBP12.2□□□□□ -0.46
CLTA-203ENST00000396603 SUPT4H1P63272 117 aaKnown RBP12.2□□□□□ -0.46
CLTA-203ENST00000396603 WFDC3Q8IUB2 231 aa12.2□□□□□ -0.46
CLTA-203ENST00000396603 UXS1Q8NBZ7 420 aa12.2□□□□□ -0.46
CLTA-203ENST00000396603 WFDC10AQ9H1F0 79 aa12.2□□□□□ -0.46
CLTA-203ENST00000396603 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.2□□□□□ -0.46
CLTA-203ENST00000396603 MLXQ9UH92 298 aa12.2□□□□□ -0.46
CLTA-203ENST00000396603 SHPKQ9UHJ6 478 aa12.2□□□□□ -0.46
CLTA-203ENST00000396603 UFC1Q9Y3C8 167 aa12.2□□□□□ -0.46
CLTA-203ENST00000396603 IGLC7A0M8Q6 106 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 ZNF320A2RRD8 509 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 SFT2D2O95562 160 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 IFNA17P01571 189 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 OR13C7P0DN81 318 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 BTCP35070 178 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 ERHP84090 104 aaKnown RBP12.19□□□□□ -0.46
CLTA-203ENST00000396603 PRCDQ00LT1 54 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 PPP1R1AQ13522 171 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 C4orf46Q504U0 113 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 SLC35G3Q8N808 338 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 COQ8AQ8NI60 647 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 C20orf85Q9H1P6 137 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 ENY2Q9NPA8 101 aa12.19□□□□□ -0.46
CLTA-203ENST00000396603 TCRBP04435 133 aa12.18□□□□□ -0.46
CLTA-203ENST00000396603 CLEC3BP05452 202 aa12.18□□□□□ -0.46
CLTA-203ENST00000396603 SULT1A3P0DMM9 295 aa12.18□□□□□ -0.46
CLTA-203ENST00000396603 SULT1A4P0DMN0 295 aa12.18□□□□□ -0.46
CLTA-203ENST00000396603 EDN2P20800 178 aa12.18□□□□□ -0.46
CLTA-203ENST00000396603 RBPMS2Q6ZRY4 209 aaKnown RBP12.18□□□□□ -0.46
CLTA-203ENST00000396603 Q6ZWC4 215 aa12.18□□□□□ -0.46
CLTA-203ENST00000396603 LRTM2Q8N967 370 aa12.18□□□□□ -0.46
CLTA-203ENST00000396603 LHFPL5Q8TAF8 219 aa12.18□□□□□ -0.46
CLTA-203ENST00000396603 ZNF502Q8TBZ5 544 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms