RNA–Protein interactions for RNA: ENST00000396547.5

TRIM39-203, Transcript of tripartite motif containing 39, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM39, Length 3,187 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-203ENST00000396547 ZFHX4Q86UP3 3567 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 LOC105371242A0A075B767 164 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 TIMM8AO60220 97 aaPredicted RBP8.1□□□□□ -1.11
TRIM39-203ENST00000396547 LDLRAD2Q5SZI1 272 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 EBLN2Q6P2I7 272 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 C1orf159Q96HA4 380 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 PMCHL2Q9BQD1 86 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 B4GALT7Q9UBV7 327 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 hDV102S1A0JD36 115 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 PLAUP00749 431 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 MRPL49Q13405 166 aaKnown RBP8.1□□□□□ -1.11
TRIM39-203ENST00000396547 VHLLQ6RSH7 139 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 C18orf32Q8TCD1 76 aa8.1□□□□□ -1.11
TRIM39-203ENST00000396547 SPTBN2O15020 2390 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 NUDT3O95989 172 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 TNFSF4P23510 183 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 SLC35E4Q6ICL7 350 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 TMEM251Q8N6I4 163 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 TXNDC17Q9BRA2 123 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 TTTY12Q9BZ98 90 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 IGKV3D-15A0A087WSY6 115 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 GGTLC3B5MD39 225 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 SS18L1O75177 396 aaPredicted RBP8.09□□□□□ -1.11
TRIM39-203ENST00000396547 MT-ND6P03923 174 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 CA7P43166 264 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 VDAC2P45880 294 aaPredicted RBP8.09□□□□□ -1.11
TRIM39-203ENST00000396547 ZNF137PP52743 207 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 EIF4EBP1Q13541 118 aaPredicted RBP8.09□□□□□ -1.11
TRIM39-203ENST00000396547 OR10J3Q5JRS4 329 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 ZNF841Q6ZN19 808 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 CT55Q8WUE5 264 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 NANOS1Q8WY41 292 aaKnown RBP8.09□□□□□ -1.11
TRIM39-203ENST00000396547 GAL3ST2Q9H3Q3 398 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 DUSP13Q9UII6 198 aa8.09□□□□□ -1.11
TRIM39-203ENST00000396547 TPRP12270 2363 aaKnown RBP8.08□□□□□ -1.12
TRIM39-203ENST00000396547 PCNX2A6NKB5 2137 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 HLA-DQA1P01909 254 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 PSG1P11464 419 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 ZNF134P52741 427 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 NRN1LQ496H8 165 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 OR4A47Q6IF82 309 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 LINC00173Q6ZV60 143 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 CNEP1R1Q8N9A8 125 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 ZNRF1Q8ND25 227 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 OR9G1Q8NH87 305 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 KLF14Q8TD94 323 aaPredicted RBP8.08□□□□□ -1.12
TRIM39-203ENST00000396547 FAM173AQ9BQD7 235 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 TET2Q6N021 2002 aaPredicted RBP8.08□□□□□ -1.12
TRIM39-203ENST00000396547 TRAV9-2A0A087WT02 112 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 TRBV9A0A0B4J1U6 114 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 SPAARA0A1B0GVQ0 90 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 FAM181BA6NEQ2 426 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 C9JCJ5 164 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 CORTO00230 105 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 ACP7Q6ZNF0 438 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 OR52E5Q8NH55 327 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 LRRC29Q8WV35 223 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 BCL2L2Q92843 193 aaPredicted RBP8.08□□□□□ -1.12
TRIM39-203ENST00000396547 TRIB1Q96RU8 372 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 TRAV9-1A0A075B6T8 112 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 IGHV2OR16-5A0A0B4J2B6 119 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 OR2T8A6NH00 312 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 PYYP10082 97 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 UBE2G1P62253 170 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 FAM201AQ5SY85 155 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 FAM214BQ7L5A3 538 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 SPATA12Q7Z6I5 190 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 SPACA3Q8IXA5 215 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 NEUROG1Q92886 237 aa8.08□□□□□ -1.12
TRIM39-203ENST00000396547 CEP250Q9BV73 2442 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 HSBP1L1C9JCN9 74 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 H3BTX0 84 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 CSN3P07498 182 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 ZNF138P52744 262 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 SELENOVP59797 346 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 MORN5Q5VZ52 161 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 AMMECR1LQ6DCA0 310 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 C19orf35Q6ZS72 473 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 C1orf229Q6ZS94 237 aaPredicted RBP8.07□□□□□ -1.12
TRIM39-203ENST00000396547 DEFB108BQ8NET1 73 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 OR5B3Q8NH48 314 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 CNOT1A5YKK6 2376 aaKnown RBP8.07□□□□□ -1.12
TRIM39-203ENST00000396547 YLPM1P49750 1951 aaKnown RBP8.07□□□□□ -1.12
TRIM39-203ENST00000396547 TNRC6AQ8NDV7 1962 aaKnown RBP8.07□□□□□ -1.12
TRIM39-203ENST00000396547 PTPRZ1P23471 2315 aaPredicted RBP8.07□□□□□ -1.12
TRIM39-203ENST00000396547 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.07□□□□□ -1.12
TRIM39-203ENST00000396547 UBE2L3P68036 154 aaKnown RBP8.07□□□□□ -1.12
TRIM39-203ENST00000396547 GDF5OSQ5U4N7 250 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 TCF24Q7RTU0 167 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 OSTCQ9NRP0 149 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 ZNRD1Q9P1U0 126 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 DYSFO75923 2080 aa8.07□□□□□ -1.12
TRIM39-203ENST00000396547 OR4C46A6NHA9 309 aa8.06□□□□□ -1.12
TRIM39-203ENST00000396547 TOX4O94842 621 aa8.06□□□□□ -1.12
TRIM39-203ENST00000396547 AREGP15514 252 aa8.06□□□□□ -1.12
TRIM39-203ENST00000396547 PRDX2P32119 198 aa8.06□□□□□ -1.12
TRIM39-203ENST00000396547 GNG5P63218 68 aa8.06□□□□□ -1.12
TRIM39-203ENST00000396547 MORN2Q502X0 79 aa8.06□□□□□ -1.12
TRIM39-203ENST00000396547 SSX8Q7RTT4 187 aa8.06□□□□□ -1.12
TRIM39-203ENST00000396547 CD177Q8N6Q3 437 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms