RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 ELOVL1Q9BW60 279 aa13.55□□□□□ -0.24
NUP50-202ENST00000396096 TRBV20OR9-2A0A075B6H5 130 aa13.54□□□□□ -0.24
NUP50-202ENST00000396096 IFITM10A6NMD0 228 aa13.54□□□□□ -0.24
NUP50-202ENST00000396096 LYNX1G3V0Z9 82 aa13.54□□□□□ -0.24
NUP50-202ENST00000396096 TYMSP04818 313 aa13.54□□□□□ -0.24
NUP50-202ENST00000396096 LYNX1P0DP58 116 aa13.54□□□□□ -0.24
NUP50-202ENST00000396096 PVRIGQ6DKI7 326 aa13.54□□□□□ -0.24
NUP50-202ENST00000396096 PQLC2Q6ZP29 291 aa13.54□□□□□ -0.24
NUP50-202ENST00000396096 NECAP1Q8NC96 275 aa13.54□□□□□ -0.24
NUP50-202ENST00000396096 PSMB11A5LHX3 300 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 PCP4L1A6NKN8 68 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 SLC25A17O43808 307 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 CRYGBP07316 175 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 C1QTNF9P0C862 333 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 OR2T10Q8NGZ9 312 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 RITA1Q96K30 269 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 UHRF2Q96PU4 802 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 RNF2Q99496 336 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 CLEC7AQ9BXN2 247 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 MRPL32Q9BYC8 188 aaKnown RBP13.53□□□□□ -0.24
NUP50-202ENST00000396096 LY96Q9Y6Y9 160 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 C9JCJ5 164 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 ACTL6BO94805 426 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 FAM3BP58499 235 aaPredicted RBP13.53□□□□□ -0.24
NUP50-202ENST00000396096 TAS2R45P59539 299 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 LCN2P80188 198 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 C10orf55Q5SWW7 151 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 KCNIP4Q6PIL6 250 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 THAP8Q8NA92 274 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 ZNF114Q8NC26 417 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 OR4X1Q8NH49 305 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 ZNF503Q96F45 646 aa13.53□□□□□ -0.24
NUP50-202ENST00000396096 DCHS1Q96JQ0 3298 aa13.52□□□□□ -0.24
NUP50-202ENST00000396096 A0A1W2PPI3 338 aa13.52□□□□□ -0.25
NUP50-202ENST00000396096 PPP5D1E7EU14 171 aa13.52□□□□□ -0.25
NUP50-202ENST00000396096 BUB1B-PAK6H3BSN5 160 aa13.52□□□□□ -0.25
NUP50-202ENST00000396096 CDSNQ15517 529 aa13.52□□□□□ -0.25
NUP50-202ENST00000396096 MRPL41Q8IXM3 137 aaKnown RBP13.52□□□□□ -0.25
NUP50-202ENST00000396096 MMD2Q8IY49 270 aa13.52□□□□□ -0.25
NUP50-202ENST00000396096 OR2T6Q8NHC8 308 aa13.52□□□□□ -0.25
NUP50-202ENST00000396096 BTF3L4Q96K17 158 aa13.52□□□□□ -0.25
NUP50-202ENST00000396096 FNDC4Q9H6D8 234 aaPredicted RBP13.52□□□□□ -0.25
NUP50-202ENST00000396096 TPSG1Q9NRR2 321 aa13.52□□□□□ -0.25
NUP50-202ENST00000396096 PPIAL4CA0A0B4J2A2 164 aa13.51□□□□□ -0.25
NUP50-202ENST00000396096 PPIAL4GP0DN37 164 aa13.51□□□□□ -0.25
NUP50-202ENST00000396096 GATA2P23769 480 aaPredicted RBP13.51□□□□□ -0.25
NUP50-202ENST00000396096 PSG5Q15238 335 aa13.51□□□□□ -0.25
NUP50-202ENST00000396096 PRSS8Q16651 343 aa13.51□□□□□ -0.25
NUP50-202ENST00000396096 LY6G5BQ8NDX9 201 aa13.51□□□□□ -0.25
NUP50-202ENST00000396096 SFRP2Q96HF1 295 aa13.51□□□□□ -0.25
NUP50-202ENST00000396096 SLC25A33Q9BSK2 321 aa13.51□□□□□ -0.25
NUP50-202ENST00000396096 MIOXQ9UGB7 285 aa13.51□□□□□ -0.25
NUP50-202ENST00000396096 IGHV1-3A0A0C4DH29 117 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 C8orf88P0DMB2 117 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 FOXL1Q12952 345 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 SSX2Q16385 188 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 HIST3H2BBQ8N257 126 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 OR5T1Q8NG75 326 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 OR8B3Q8NGG8 313 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 TMEM37Q8WXS4 190 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 OR8B2Q96RD0 313 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 RAB1BQ9H0U4 201 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 GAR1Q9NY12 217 aaKnown RBP13.5□□□□□ -0.25
NUP50-202ENST00000396096 AMMECR1Q9Y4X0 333 aaPredicted RBP13.5□□□□□ -0.25
NUP50-202ENST00000396096 MDFIC2A0A1B0GVS7 189 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 A0A1W2PPQ1 181 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 IGLC7A0M8Q6 106 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 ENSAO43768 121 aaKnown RBP13.5□□□□□ -0.25
NUP50-202ENST00000396096 OCC1Q8TAD7 63 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 ACY3Q96HD9 319 aa13.5□□□□□ -0.25
NUP50-202ENST00000396096 ANKHD1Q8IWZ3 2542 aaKnown RBP13.49□□□□□ -0.25
NUP50-202ENST00000396096 IGKV1D-37A0A075B6S9 117 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 IGHV3-72A0A0B4J1Y9 119 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 TCRBV4S1A1TA0A5B7 111 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 PGPEP1LA6NFU8 196 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 LY6LH3BQJ8 138 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 CRYGCP07315 174 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 SOD3P08294 240 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 SELENOTP62341 195 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 PAX2Q02962 417 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 C11orf71Q6IPW1 123 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 FAM167A-AS1Q96KT0 104 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 DNAJC4Q9NNZ3 241 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 CBLN4Q9NTU7 201 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 PITPNC1Q9UKF7 332 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 INSIG2Q9Y5U4 225 aa13.49□□□□□ -0.25
NUP50-202ENST00000396096 A0A1W2PRE2 83 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 S100A2P29034 98 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 C4orf17Q53FE4 359 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 ACTL10Q5JWF8 245 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 ETFRF1Q6IPR1 90 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 TEX38Q6PEX7 206 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 PFDN5Q99471 154 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 RNF5Q99942 180 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 AURKAIP1Q9NWT8 199 aaPredicted RBP13.48□□□□□ -0.25
NUP50-202ENST00000396096 SIGLEC9Q9Y336 463 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 MALRD1Q5VYJ5 2156 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 OR7C2O60412 319 aa13.48□□□□□ -0.25
NUP50-202ENST00000396096 RPL27AP46776 148 aaKnown RBP13.48□□□□□ -0.25
NUP50-202ENST00000396096 SSBP2P81877 361 aaPredicted RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms