RNA–Protein interactions for RNA: ENST00000395795.5

CXCL12-206, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5 BASIC

Gene CXCL12, Length 404 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-206ENST00000395795 EWSR1Q01844 656 aaKnown RBP eCLIP11.98□□□□□ -0.49
CXCL12-206ENST00000395795 ANKRD55Q3KP44 614 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 SP6Q3SY56 376 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 Q56UQ5 140 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 FAM90A2PQ658T7 463 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 UBAC2Q8NBM4 344 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 OR13C8Q8NGS7 320 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 OR4A16Q8NH70 328 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 TERB2Q8NHR7 220 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 AP3S1Q92572 193 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 MISP3Q96FF7 219 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 RNF2Q99496 336 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 TXN2Q99757 166 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 C20orf24Q9BUV8 137 aa11.98□□□□□ -0.49
CXCL12-206ENST00000395795 NXF2Q9GZY0 626 aaKnown RBP11.98□□□□□ -0.49
CXCL12-206ENST00000395795 MRPL36Q9P0J6 103 aaKnown RBP11.98□□□□□ -0.49
CXCL12-206ENST00000395795 PLECQ15149 4684 aaKnown RBP11.98□□□□□ -0.49
CXCL12-206ENST00000395795 IGHV7-4-1A0A0J9YVY3 117 aa11.97□□□□□ -0.49
CXCL12-206ENST00000395795 C3orf85A0A1B0GTC6 90 aa11.97□□□□□ -0.49
CXCL12-206ENST00000395795 ST8SIA3O43173 380 aa11.97□□□□□ -0.49
CXCL12-206ENST00000395795 CTSDP07339 412 aaPredicted RBP11.97□□□□□ -0.49
CXCL12-206ENST00000395795 PGAM2P15259 253 aa11.97□□□□□ -0.49
CXCL12-206ENST00000395795 S100GP29377 79 aa11.97□□□□□ -0.49
CXCL12-206ENST00000395795 PPP5CP53041 499 aa11.97□□□□□ -0.49
CXCL12-206ENST00000395795 AARDQ4LEZ3 155 aa11.97□□□□□ -0.49
CXCL12-206ENST00000395795 FAAP20Q6NZ36 180 aa11.97□□□□□ -0.49
CXCL12-206ENST00000395795 LILRB2Q8N423 598 aa11.97□□□□□ -0.49
CXCL12-206ENST00000395795 LHFPL5Q8TAF8 219 aa11.97□□□□□ -0.49
CXCL12-206ENST00000395795 RTBDNQ9BSG5 229 aaPredicted RBP11.97□□□□□ -0.49
CXCL12-206ENST00000395795 BATF3Q9NR55 127 aa11.97□□□□□ -0.49
CXCL12-206ENST00000395795 GABARAPH6UMI1 98 aa11.96□□□□□ -0.49
CXCL12-206ENST00000395795 RNASE2P10153 161 aaKnown RBP11.96□□□□□ -0.49
CXCL12-206ENST00000395795 MFAP4P55083 255 aa11.96□□□□□ -0.49
CXCL12-206ENST00000395795 BSXQ3C1V8 233 aa11.96□□□□□ -0.49
CXCL12-206ENST00000395795 WFDC3Q8IUB2 231 aa11.96□□□□□ -0.49
CXCL12-206ENST00000395795 MARCH1Q8TCQ1 289 aa11.96□□□□□ -0.49
CXCL12-206ENST00000395795 RHPN1-AS1Q9BWJ2 59 aa11.96□□□□□ -0.49
CXCL12-206ENST00000395795 FNDC4Q9H6D8 234 aaPredicted RBP11.96□□□□□ -0.49
CXCL12-206ENST00000395795 ALMS1Q8TCU4 4167 aa11.96□□□□□ -0.5
CXCL12-206ENST00000395795 IGHV3-49A0A0A0MS15 119 aa11.95□□□□□ -0.5
CXCL12-206ENST00000395795 A6NHS1 94 aa11.95□□□□□ -0.5
CXCL12-206ENST00000395795 RAB3DO95716 219 aa11.95□□□□□ -0.5
CXCL12-206ENST00000395795 ZNF124Q15973 351 aa11.95□□□□□ -0.5
CXCL12-206ENST00000395795 STEAP1BQ6NZ63 245 aa11.95□□□□□ -0.5
CXCL12-206ENST00000395795 DYNC2LI1Q8TCX1 351 aa11.95□□□□□ -0.5
CXCL12-206ENST00000395795 GLYATL2Q8WU03 294 aa11.95□□□□□ -0.5
CXCL12-206ENST00000395795 SMIM4Q8WVI0 70 aa11.95□□□□□ -0.5
CXCL12-206ENST00000395795 ZFAND3Q9H8U3 227 aa11.95□□□□□ -0.5
CXCL12-206ENST00000395795 EPPK1P58107 5090 aaKnown RBP11.94□□□□□ -0.5
CXCL12-206ENST00000395795 A0A1B0GU03 582 aa11.94□□□□□ -0.5
CXCL12-206ENST00000395795 NUPL2O15504 423 aaKnown RBP11.94□□□□□ -0.5
CXCL12-206ENST00000395795 APOHP02749 345 aaPredicted RBP11.94□□□□□ -0.5
CXCL12-206ENST00000395795 ETV6P41212 452 aa11.94□□□□□ -0.5
CXCL12-206ENST00000395795 TAS2R19P59542 299 aa11.94□□□□□ -0.5
CXCL12-206ENST00000395795 MLANAQ16655 118 aa11.94□□□□□ -0.5
CXCL12-206ENST00000395795 TOMM20LQ6UXN7 152 aa11.94□□□□□ -0.5
CXCL12-206ENST00000395795 TMEM116Q8NCL8 245 aa11.94□□□□□ -0.5
CXCL12-206ENST00000395795 CCDC59Q9P031 241 aaKnown RBP11.94□□□□□ -0.5
CXCL12-206ENST00000395795 IGHV3OR16-13A0A075B7E8 117 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 IGHV3-74A0A0B4J1X5 117 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 CTDSPLO15194 276 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 CDS2O95674 445 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 TMEM50AO95807 157 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 ERHP84090 104 aaKnown RBP11.93□□□□□ -0.5
CXCL12-206ENST00000395795 SSBP1Q04837 148 aaKnown RBP11.93□□□□□ -0.5
CXCL12-206ENST00000395795 RELQ04864 619 aaPredicted RBP11.93□□□□□ -0.5
CXCL12-206ENST00000395795 LAMTOR1Q6IAA8 161 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 Q6ZWC4 215 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 C15orf40Q8WUR7 153 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 TMEM170AQ8WVE7 144 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 PINX1Q96BK5 328 aaKnown RBP11.93□□□□□ -0.5
CXCL12-206ENST00000395795 SOSTQ9BQB4 213 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 TMEM222Q9H0R3 208 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 VSIRQ9H7M9 311 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 GPR132Q9UNW8 380 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 TP53TG1Q9Y2A0 90 aa11.93□□□□□ -0.5
CXCL12-206ENST00000395795 KIR2DL5BA0A0G2JN68 375 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 KIR2DL5BA0A0G2JPC4 375 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 OR4C46A6NHA9 309 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 OR5AC1P0C628 307 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 AKR1C2P52895 323 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 SCGB2B2Q4G0G5 96 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 APRG1Q8IVJ8 170 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 KIR2DL5AQ8N109 375 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 OR4C16Q8NGL9 310 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 KIR2DL5BQ8NHK3 375 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 ZFAND1Q8TCF1 268 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 ST8SIA2Q92186 375 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 MAP6D1Q9H9H5 199 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 COPZ2Q9P299 210 aa11.92□□□□□ -0.5
CXCL12-206ENST00000395795 TRAV14DV4A0A0A6YYC5 116 aa11.91□□□□□ -0.5
CXCL12-206ENST00000395795 GNG7O60262 68 aa11.91□□□□□ -0.5
CXCL12-206ENST00000395795 MRPS10P82664 201 aaKnown RBP11.91□□□□□ -0.5
CXCL12-206ENST00000395795 DEFB135Q30KP9 77 aa11.91□□□□□ -0.5
CXCL12-206ENST00000395795 SELENOHQ8IZQ5 122 aaKnown RBP11.91□□□□□ -0.5
CXCL12-206ENST00000395795 SLC35G3Q8N808 338 aa11.91□□□□□ -0.5
CXCL12-206ENST00000395795 CCDC71LQ8N9Z2 235 aa11.91□□□□□ -0.5
CXCL12-206ENST00000395795 IL17DQ8TAD2 202 aa11.91□□□□□ -0.5
CXCL12-206ENST00000395795 TMEM230Q96A57 120 aa11.91□□□□□ -0.5
CXCL12-206ENST00000395795 RNF183Q96D59 192 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms