RNA–Protein interactions for RNA: ENST00000394768.6

SYNE2-205, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 11,095 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-205ENST00000394768 MSRB3Q8IXL7 192 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 VKORC1Q9BQB6 163 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 TNFRSF12AQ9NP84 129 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 TRBV5-5A0A0J9YX44 114 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 A0A1W2PPV9 198 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 RPL36AP83881 106 aaKnown RBP6.3□□□□□ -1.4
SYNE2-205ENST00000394768 ORAOV1Q8WV07 137 aa6.3□□□□□ -1.4
SYNE2-205ENST00000394768 RPL36ALQ969Q0 106 aaKnown RBP6.3□□□□□ -1.4
SYNE2-205ENST00000394768 PRSS23O95084 383 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 CLEC19AQ6UXS0 136 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 MRPS18BQ9Y676 258 aaKnown RBP6.29□□□□□ -1.4
SYNE2-205ENST00000394768 BRCA1P38398 1863 aaKnown RBP6.29□□□□□ -1.4
SYNE2-205ENST00000394768 PRR32B1ATL7 298 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 NAT1P18440 290 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 C2orf68Q2NKX9 166 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 CBLN2Q8IUK8 224 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 CHAC1Q9BUX1 264 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 GZMBP10144 247 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 RBMY1FQ15415 496 aaKnown RBP6.29□□□□□ -1.4
SYNE2-205ENST00000394768 SIGLEC15Q6ZMC9 328 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 TRAV8-2A0A0B4J237 113 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 IL11P20809 199 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 ZXDCQ2QGD7 858 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-205ENST00000394768 A0A1W2PRX2 142 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 C17orf100A8MU93 164 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 ZG16O60844 167 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 SAP30O75446 220 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 BIVMQ86UB2 503 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 DPM2O94777 84 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 DDTP30046 118 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 MESP2Q0VG99 397 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 C5orf30Q96GV9 206 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 LEPROTO15243 131 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 APOHP02749 345 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-205ENST00000394768 ZNF826PQ6ZT77 177 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 USMG5Q96IX5 58 aa6.29□□□□□ -1.4
SYNE2-205ENST00000394768 HYAL3O43820 417 aaPredicted RBP6.29□□□□□ -1.4
SYNE2-205ENST00000394768 CSRP1P21291 193 aaKnown RBP6.29□□□□□ -1.4
SYNE2-205ENST00000394768 SAA1P0DJI8 122 aaPredicted RBP6.28□□□□□ -1.4
SYNE2-205ENST00000394768 RND3P61587 244 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 C3orf56Q8N813 242 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 HEATR5AQ86XA9 2040 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 TRBV7-1A0A0A6YYK4 115 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 LAMTOR3Q9UHA4 124 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 COL24A1Q17RW2 1714 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 A0A1B0GTL3 188 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 NTN1O95631 604 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 PAX8Q06710 450 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 SS18Q15532 418 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 MINOS1Q5TGZ0 78 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 Q9H3A6 140 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 MINOS1-NBL1R4GNA1 71 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 MCRIP2Q9BUT9 160 aaKnown RBP6.28□□□□□ -1.4
SYNE2-205ENST00000394768 WNT10AQ9GZT5 417 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 IL36BQ9NZH7 164 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 HBDP02042 147 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 AMBPP02760 352 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 RUNX1Q01196 453 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 ASCL4Q6XD76 172 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 POC1AQ8NBT0 407 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 LHFPL6Q9Y693 200 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 CA1P00915 261 aaPredicted RBP6.28□□□□□ -1.4
SYNE2-205ENST00000394768 INAFM2P0DMQ5 153 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 ZNF562Q6V9R5 426 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 TRAV8-4A0A0B4J246 113 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 ATP5L2Q7Z4Y8 100 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 NIT1Q86X76 327 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 CACNA1HO95180 2353 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 CACNA1EQ15878 2313 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 F12P00748 615 aaPredicted RBP6.28□□□□□ -1.4
SYNE2-205ENST00000394768 THBDP07204 575 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 RNF125Q96EQ8 232 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 PHF3Q92576 2039 aaKnown RBP6.28□□□□□ -1.4
SYNE2-205ENST00000394768 IZUMO1RA6ND01 250 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 ZNF79Q15937 498 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 DEFB121Q5J5C9 76 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 FDCSPQ8NFU4 85 aa6.28□□□□□ -1.4
SYNE2-205ENST00000394768 HRKO00198 91 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 ZNHIT1O43257 154 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 RASL11AQ6T310 242 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 LINC01560Q8TB33 94 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 TMEM133Q9H2Q1 129 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 B4DSR2 109 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 CXCL3P19876 107 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 IMMP2LQ96T52 175 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 FBXL15Q9H469 300 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 NHP2Q9NX24 153 aaKnown RBP6.27□□□□□ -1.41
SYNE2-205ENST00000394768 COL5A3P25940 1745 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-205ENST00000394768 RCC1P18754 421 aaPredicted RBP6.27□□□□□ -1.41
SYNE2-205ENST00000394768 LINC00158P58513 81 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 PLEKHB2Q96CS7 222 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 IGHV2OR16-5A0A0B4J2B6 119 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 PRCDQ00LT1 54 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 DRAM1Q8N682 238 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 IL18BPO95998 194 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 RHOGP84095 191 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 CHCHD1Q96BP2 118 aaKnown RBP6.27□□□□□ -1.41
SYNE2-205ENST00000394768 ANAPC10Q9UM13 185 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 YPEL1O60688 119 aa6.27□□□□□ -1.41
SYNE2-205ENST00000394768 C18orf15Q96N68 181 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms