RNA–Protein interactions for RNA: ENST00000394633.7

PCDHA1-202, Transcript of protocadherin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene PCDHA1, Length 2,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-202ENST00000394633 KLF3P57682 345 aaPredicted RBP14.97□□□□□ -0.01
PCDHA1-202ENST00000394633 VHLLQ6RSH7 139 aa14.97□□□□□ -0.01
PCDHA1-202ENST00000394633 SEM1Q6ZVN7 128 aa14.97□□□□□ -0.01
PCDHA1-202ENST00000394633 OR5AU1Q8NGC0 362 aa14.97□□□□□ -0.01
PCDHA1-202ENST00000394633 FAM222BQ8WU58 562 aa14.97□□□□□ -0.01
PCDHA1-202ENST00000394633 C20orf144Q9BQM9 153 aa14.97□□□□□ -0.01
PCDHA1-202ENST00000394633 RNASE7Q9H1E1 156 aaKnown RBP14.97□□□□□ -0.01
PCDHA1-202ENST00000394633 RAB9BQ9NP90 201 aa14.97□□□□□ -0.01
PCDHA1-202ENST00000394633 TECRQ9NZ01 308 aaKnown RBP14.97□□□□□ -0.01
PCDHA1-202ENST00000394633 PKD1L2Q7Z442 2459 aa14.96□□□□□ -0.01
PCDHA1-202ENST00000394633 UPK2O00526 184 aa14.96□□□□□ -0.01
PCDHA1-202ENST00000394633 ZNF705AQ6ZN79 300 aaPredicted RBP14.96□□□□□ -0.01
PCDHA1-202ENST00000394633 SPINK4O60575 86 aa14.96□□□□□ -0.02
PCDHA1-202ENST00000394633 MMP23AO75900 390 aa14.96□□□□□ -0.02
PCDHA1-202ENST00000394633 FOSL1P15407 271 aa14.96□□□□□ -0.02
PCDHA1-202ENST00000394633 GNB4Q9HAV0 340 aa14.96□□□□□ -0.02
PCDHA1-202ENST00000394633 ZNF257Q9Y2Q1 563 aa14.96□□□□□ -0.02
PCDHA1-202ENST00000394633 RNF114Q9Y508 228 aa14.96□□□□□ -0.02
PCDHA1-202ENST00000394633 SRRM4A7MD48 611 aaKnown RBP14.95□□□□□ -0.02
PCDHA1-202ENST00000394633 GGTLC3B5MD39 225 aa14.95□□□□□ -0.02
PCDHA1-202ENST00000394633 COMPP49747 757 aaPredicted RBP14.95□□□□□ -0.02
PCDHA1-202ENST00000394633 CX3CL1P78423 397 aa14.95□□□□□ -0.02
PCDHA1-202ENST00000394633 FXYD3Q14802 87 aa14.95□□□□□ -0.02
PCDHA1-202ENST00000394633 RPRMLQ8N4K4 120 aa14.95□□□□□ -0.02
PCDHA1-202ENST00000394633 VN1R17PQ8TDU5 208 aa14.95□□□□□ -0.02
PCDHA1-202ENST00000394633 SLC35E1Q96K37 410 aa14.95□□□□□ -0.02
PCDHA1-202ENST00000394633 SAMD10Q9BYL1 202 aa14.95□□□□□ -0.02
PCDHA1-202ENST00000394633 OSTCQ9NRP0 149 aa14.95□□□□□ -0.02
PCDHA1-202ENST00000394633 NBASA2RRP1 2371 aa14.95□□□□□ -0.02
PCDHA1-202ENST00000394633 OR7C2O60412 319 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 IGKV1-16P04430 117 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 OR5G3P0C626 314 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 GLRXP35754 106 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 MLANAQ16655 118 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 STUMQ69YW2 141 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 TEX50A0A1B0GTY4 177 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 IGLV2-8P01709 118 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 CT45A6P0DMU7 189 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 CT45A5P0DMU8 189 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 CT45A7P0DMV0 189 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 PRR30Q53SZ7 412 aaPredicted RBP14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 TMEM136Q6ZRR5 245 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 GAFA1Q96PS6 74 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 MIEN1Q9BRT3 115 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 ZNRD1Q9P1U0 126 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 NAT8BQ9UHF3 227 aa14.94□□□□□ -0.02
PCDHA1-202ENST00000394633 G0S2P27469 103 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 TIGITQ495A1 244 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 C2orf83Q53S99 150 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 DEFB108BQ8NET1 73 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 OR9G1Q8NH87 305 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 SLC35D1Q9NTN3 355 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 RNF7Q9UBF6 113 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 FBXL7Q9UJT9 491 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 PAM16Q9Y3D7 125 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 ACACBO00763 2458 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 PCNX1Q96RV3 2341 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 IGLV3-9A0A075B6K5 115 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 GATA4P43694 442 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 UCNP55089 124 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 TCL1AP56279 114 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 SLC35B1P78383 322 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 GCM1Q9NP62 436 aa14.93□□□□□ -0.02
PCDHA1-202ENST00000394633 MBD3L4A6NDZ8 208 aaPredicted RBP14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 MBD3L3A6NE82 208 aaPredicted RBP14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 MBD3L5A6NJ08 208 aaPredicted RBP14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 CRYABP02511 175 aaKnown RBP14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 MT-ND6P03923 174 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 RNASE2P10153 161 aaKnown RBP14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 SUMO1P63165 101 aaKnown RBP14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 TMEM183BQ1AE95 376 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 KIAA1644Q3SXP7 199 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 WDR73Q6P4I2 378 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 PNKDQ8N490 385 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 MBD3L2Q8NHZ7 208 aaPredicted RBP14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 IGF2BP2-AS1Q96M15 143 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 CCL13Q99616 98 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 DYSFO75923 2080 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 ISLRO14498 428 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 GPX1P07203 203 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 TIMM23BQ5SRD1 257 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 ZNF474Q6S9Z5 364 aaPredicted RBP14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 SLC25A48Q6ZT89 311 aaKnown RBP14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 FAM216BQ8N7L0 139 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 VAMP8Q9BV40 100 aa14.92□□□□□ -0.02
PCDHA1-202ENST00000394633 TAS2R45P59539 299 aa14.91□□□□□ -0.02
PCDHA1-202ENST00000394633 RTL8BQ17RB0 113 aa14.91□□□□□ -0.02
PCDHA1-202ENST00000394633 MRPL52Q86TS9 123 aaKnown RBP14.91□□□□□ -0.02
PCDHA1-202ENST00000394633 SIGLECL1Q8N7X8 197 aa14.91□□□□□ -0.02
PCDHA1-202ENST00000394633 Q8N976 141 aa14.91□□□□□ -0.02
PCDHA1-202ENST00000394633 OR10W1Q8NGF6 305 aa14.91□□□□□ -0.02
PCDHA1-202ENST00000394633 SNRNP40Q96DI7 357 aaKnown RBP14.91□□□□□ -0.02
PCDHA1-202ENST00000394633 FAM103A1Q9BTL3 118 aaKnown RBP14.91□□□□□ -0.02
PCDHA1-202ENST00000394633 C19orf24Q9BVV8 132 aa14.91□□□□□ -0.02
PCDHA1-202ENST00000394633 LINC00574Q9H8X3 128 aa14.91□□□□□ -0.02
PCDHA1-202ENST00000394633 FAM215AQ9Y5M1 114 aa14.91□□□□□ -0.02
PCDHA1-202ENST00000394633 A0A1W2PRE2 83 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 M0QZK8 103 aa14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 SAA1P0DJI8 122 aaPredicted RBP14.9□□□□□ -0.02
PCDHA1-202ENST00000394633 C8orf88P0DMB2 117 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms