RNA–Protein interactions for RNA: ENST00000394597.6

RFFL-202, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFFL, Length 4,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-202ENST00000394597 F11RQ9Y624 299 aaKnown RBP4.76□□□□□ -1.65
RFFL-202ENST00000394597 TRAV9-1A0A075B6T8 112 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.76□□□□□ -1.65
RFFL-202ENST00000394597 A0A0A6YYD4 124 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 A1L4Q6 167 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 A6NJY4 79 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 CD5LO43866 347 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 SMIM13P0DJ93 91 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 G6PCP35575 357 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 MPV17P39210 176 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 CEBPDP49716 269 aaPredicted RBP4.76□□□□□ -1.65
RFFL-202ENST00000394597 FOXA3P55318 350 aaPredicted RBP4.76□□□□□ -1.65
RFFL-202ENST00000394597 TM4SF20Q53R12 229 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 IGFL2Q6UWQ7 119 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 TMEM136Q6ZRR5 245 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 ZNF525Q8N782 197 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 NHLRC2Q8NBF2 726 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 SPSB4Q96A44 273 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 RNF115Q9Y4L5 304 aa4.76□□□□□ -1.65
RFFL-202ENST00000394597 USP34Q70CQ2 3546 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 A0A087X0K7 114 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 C5orf63A6NC05 138 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 SCTP09683 121 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 ARL14EPLP0DKL9 152 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 SCGB1C2P0DMR2 95 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 AZU1P20160 251 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 SEC11AP67812 179 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 ZNF818PQ6ZRF7 136 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 FAM89BQ8N5H3 189 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 ZBTB34Q8NCN2 500 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 ANAPC13Q9BS18 74 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 TMEM167BQ9NRX6 74 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 MED13LQ71F56 2210 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 IGHV1-18A0A0C4DH31 117 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 A0A1B0GWB2 263 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 SCO2A0A1W2PP80 73 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 SAP30O75446 220 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 TYMSP04818 313 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 STAG3L2P0CL84 134 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 NTF4P34130 210 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 TTC32Q5I0X7 151 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 OR10J3Q5JRS4 329 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 LINC01560Q8TB33 94 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 AGMATQ9BSE5 352 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 SSBP3Q9BWW4 388 aaPredicted RBP4.75□□□□□ -1.65
RFFL-202ENST00000394597 GEMIN7Q9H840 131 aaKnown RBP4.75□□□□□ -1.65
RFFL-202ENST00000394597 CRIM1Q9NZV1 1036 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 SHANK1Q9Y566 2161 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 OTOGLQ3ZCN5 2332 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 CACNA1AO00555 2505 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 LOC105371242A0A075B767 164 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 PPIAL4CA0A0B4J2A2 164 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 PPIAL4GP0DN37 164 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 CD1BP29016 333 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 ID3Q02535 119 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 HSD52Q0P140 79 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 FAM71F2Q6NXP2 309 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 LRTM2Q8N967 370 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 OCC1Q8TAD7 63 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 PERPQ96FX8 193 aa4.75□□□□□ -1.65
RFFL-202ENST00000394597 COL4A2P08572 1712 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 A0A0G2JLM5 398 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 PGLYRP1O75594 196 aaPredicted RBP4.74□□□□□ -1.65
RFFL-202ENST00000394597 CEACAM4O75871 244 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 APOBEC3AP31941 199 aaPredicted RBP4.74□□□□□ -1.65
RFFL-202ENST00000394597 PDLIM4P50479 330 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 RPP25LQ8N5L8 163 aaKnown RBP4.74□□□□□ -1.65
RFFL-202ENST00000394597 CLUHP3Q96NS8 147 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 CCL13Q99616 98 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 CLEC7AQ9BXN2 247 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.74□□□□□ -1.652e-6■■□□□ 14.5
RFFL-202ENST00000394597 CEACAM18A8MTB9 384 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 B9A039 149 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 H3BVH4 76 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 NUPR1O60356 82 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 FCGR3BO75015 233 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 CRYBB3P26998 211 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 IL15RAQ13261 267 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 PRSS8Q16651 343 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 CENPWQ5EE01 88 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 RNASE6Q93091 150 aaKnown RBP4.74□□□□□ -1.65
RFFL-202ENST00000394597 GNB1LQ9BYB4 327 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 UBTD1Q9HAC8 227 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 IL36RNQ9UBH0 155 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 TIMM9Q9Y5J7 89 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 SLC25A15Q9Y619 301 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 SONP18583 2426 aaKnown RBP4.74□□□□□ -1.65
RFFL-202ENST00000394597 IGHV2-26A0A0B4J1V2 119 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 hDV102S1A0JD36 115 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 FAM231BA6NCW3 169 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 IGHV3-13P01766 116 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 IGHV3-7P01780 117 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 LIPFP07098 398 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 UCP1P25874 307 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 KIR2DS2P43631 304 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 BSPH1Q075Z2 132 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 HES1Q14469 280 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 TMEM42Q69YG0 159 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 MUC15Q8N387 334 aa4.74□□□□□ -1.65
RFFL-202ENST00000394597 TPRX1Q8N7U7 411 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms