RNA–Protein interactions for RNA: ENST00000394253.7

USP49-203, Transcript of ubiquitin specific peptidase 49, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP49, Length 9,034 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-203ENST00000394253 HIST1H2BKO60814 126 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 IGKV3-20P01619 116 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 HIST1H2BJP06899 126 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 HIST1H2BOP23527 126 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 HIST1H2BBP33778 126 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 HIST1H2BDP58876 126 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 HIST1H2BCP62807 126 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 HIST2H2BEQ16778 126 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.44□□□□□ -0.58
USP49-203ENST00000394253 HIST1H2BHQ93079 126 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 LINC01587Q99440 93 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 HIST1H2BNQ99877 126 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 HIST1H2BMQ99879 126 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 TNFRSF12AQ9NP84 129 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 IFI27L1Q96BM0 104 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 CLEC7AQ9BXN2 247 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 UMODP07911 640 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 H2BFSP57053 126 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 SIGLEC14Q08ET2 396 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 CCL4L1Q8NHW4 92 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 ADARB2-AS1A8MUL3 147 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 OR2H2O95918 312 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 SCTP09683 121 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 RBM3P98179 157 aaKnown RBP11.44□□□□□ -0.58
USP49-203ENST00000394253 MS4A4AQ96JQ5 239 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 TCF19Q9Y242 345 aa11.44□□□□□ -0.58
USP49-203ENST00000394253 C21orf140B9A014 251 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 CEACAM5P06731 702 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 CD7P09564 240 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 PATE4P0C8F1 98 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 TNRC6CQ9HCJ0 1690 aaKnown RBP11.43□□□□□ -0.58
USP49-203ENST00000394253 IGLV3-27P01718 113 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 ATP6V0BQ99437 205 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 NPDC1Q9NQX5 325 aaPredicted RBP11.43□□□□□ -0.58
USP49-203ENST00000394253 ZNF114Q8NC26 417 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 TEX45Q8NA69 505 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 SRD5A1P18405 259 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 IGKV1D-42A0A075B6H8 117 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 DLK2Q6UY11 383 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 PPP1R3EQ9H7J1 279 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 SCO2A0A1W2PP80 73 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 GAGE12JA6NER3 117 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 GAGE1Q13065 139 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 GAGE4Q13068 117 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 GAGE5Q13069 117 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 GAGE6Q13070 117 aa11.43□□□□□ -0.58
USP49-203ENST00000394253 BCL6BQ8N143 479 aaPredicted RBP11.43□□□□□ -0.58
USP49-203ENST00000394253 FAM27BQ5VT28 67 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 WFDC5Q8TCV5 224 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 ITLN2Q8WWU7 325 aaPredicted RBP11.42□□□□□ -0.58
USP49-203ENST00000394253 Q9H3A6 140 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 A0A1W2PPE3 182 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 PRSS23O95084 383 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 IRF3Q14653 427 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 PRR7Q8TB68 274 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 SLC25A38Q96DW6 304 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 FABP5P3A8MUU1 101 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 ZG16O60844 167 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 TGIF1Q15583 401 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 DSCR8Q96T75 97 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 CGAP01215 116 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 ASPHD2Q6ICH7 369 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 A0A1W2PPC1 479 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 ARPC1AQ92747 370 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 IDI2-AS1Q9NZ38 188 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 ATXN7O15265 892 aaPredicted RBP11.42□□□□□ -0.58
USP49-203ENST00000394253 ADMP35318 185 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 CENPVQ7Z7K6 275 aaPredicted RBP11.42□□□□□ -0.58
USP49-203ENST00000394253 SVIPQ8NHG7 77 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 FOXQ1Q9C009 403 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 SPTY2D1-AS1A0A0U1RR47 76 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 GZMBP10144 247 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 KLF17Q5JT82 389 aaPredicted RBP11.42□□□□□ -0.58
USP49-203ENST00000394253 ADAMTSL5Q6ZMM2 481 aa11.42□□□□□ -0.58
USP49-203ENST00000394253 MAGEA5P43359 124 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 KLHDC9Q8NEP7 349 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 SNHG12Q9BXW3 62 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 TMEM242Q9NWH2 141 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 PHF7Q9BWX1 381 aaPredicted RBP11.41□□□□□ -0.58
USP49-203ENST00000394253 JPT1Q9UK76 154 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 KIR3DS1Q14943 382 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 PRRT4C9JH25 899 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 CD160O95971 181 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 HIST1H2BLQ99880 126 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 RASL10BQ96S79 203 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 LCTP09848 1927 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 C1QL4Q86Z23 238 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 ZNF576Q9H609 170 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 LOC105371242A0A075B767 164 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 PPIAL4CA0A0B4J2A2 164 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 IQCF6A8MYZ5 107 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 PPIAL4GP0DN37 164 aa11.41□□□□□ -0.58
USP49-203ENST00000394253 F8W1H4 67 aa11.4□□□□□ -0.58
USP49-203ENST00000394253 KIAA1551Q9HCM1 1747 aa11.4□□□□□ -0.58
USP49-203ENST00000394253 TRAV8-3A0A0A6YYJ7 113 aa11.4□□□□□ -0.58
USP49-203ENST00000394253 OR9G1Q8NH87 305 aa11.4□□□□□ -0.58
USP49-203ENST00000394253 TMEM167AQ8TBQ9 72 aa11.4□□□□□ -0.58
USP49-203ENST00000394253 CXCL16Q9H2A7 254 aa11.4□□□□□ -0.58
USP49-203ENST00000394253 PEMTQ9UBM1 199 aa11.4□□□□□ -0.58
USP49-203ENST00000394253 PPP1R27Q86WC6 154 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms