RNA–Protein interactions for RNA: ENST00000393459.5

SFXN3-202, Transcript of sideroflexin 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SFXN3, Length 3,098 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-202ENST00000393459 FAM90A26D6RGX4 464 aa11.97□□□□□ -0.49
SFXN3-202ENST00000393459 TIMM8AO60220 97 aaPredicted RBP11.97□□□□□ -0.49
SFXN3-202ENST00000393459 KLF3P57682 345 aaPredicted RBP11.97□□□□□ -0.49
SFXN3-202ENST00000393459 IL11RAQ14626 422 aa11.97□□□□□ -0.49
SFXN3-202ENST00000393459 KRTAP27-1Q3LI81 207 aa11.97□□□□□ -0.49
SFXN3-202ENST00000393459 TM4SF20Q53R12 229 aa11.97□□□□□ -0.49
SFXN3-202ENST00000393459 DUX4L9Q6RFH8 374 aaPredicted RBP11.97□□□□□ -0.49
SFXN3-202ENST00000393459 S100A7AQ86SG5 101 aa11.97□□□□□ -0.49
SFXN3-202ENST00000393459 C1orf159Q96HA4 380 aa11.97□□□□□ -0.49
SFXN3-202ENST00000393459 NABP2Q9BQ15 211 aa11.97□□□□□ -0.49
SFXN3-202ENST00000393459 TNFSF4P23510 183 aa11.97□□□□□ -0.49
SFXN3-202ENST00000393459 NPY1RP25929 384 aa11.97□□□□□ -0.49
SFXN3-202ENST00000393459 OR1C1Q15619 314 aa11.97□□□□□ -0.49
SFXN3-202ENST00000393459 GDF5OSQ5U4N7 250 aa11.97□□□□□ -0.49
SFXN3-202ENST00000393459 RAB37Q96AX2 223 aa11.97□□□□□ -0.49
SFXN3-202ENST00000393459 CLDN18P56856 261 aa11.96□□□□□ -0.49
SFXN3-202ENST00000393459 KLHDC1Q8N7A1 406 aa11.96□□□□□ -0.49
SFXN3-202ENST00000393459 OR5B3Q8NH48 314 aa11.96□□□□□ -0.49
SFXN3-202ENST00000393459 BCL2L2Q92843 193 aaPredicted RBP11.96□□□□□ -0.49
SFXN3-202ENST00000393459 S1PR3Q99500 378 aa11.96□□□□□ -0.49
SFXN3-202ENST00000393459 NPVFQ9HCQ7 196 aa11.96□□□□□ -0.49
SFXN3-202ENST00000393459 ZGRF1Q86YA3 2104 aa11.96□□□□□ -0.49
SFXN3-202ENST00000393459 LNP1A1A4G5 178 aa11.96□□□□□ -0.5
SFXN3-202ENST00000393459 OR4C46A6NHA9 309 aa11.96□□□□□ -0.5
SFXN3-202ENST00000393459 KLK10O43240 276 aa11.96□□□□□ -0.5
SFXN3-202ENST00000393459 SNRNP40Q96DI7 357 aaKnown RBP11.96□□□□□ -0.5
SFXN3-202ENST00000393459 SFXN3Q9BWM7 321 aa11.96□□□□□ -0.5
SFXN3-202ENST00000393459 KLF13Q9Y2Y9 288 aaPredicted RBP11.96□□□□□ -0.5
SFXN3-202ENST00000393459 SPTAN1Q13813 2472 aaKnown RBP11.96□□□□□ -0.5
SFXN3-202ENST00000393459 FAM181BA6NEQ2 426 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 PPIAL4DF5H284 164 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 REG1AP05451 166 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 UBE2L3P68036 154 aaKnown RBP11.95□□□□□ -0.5
SFXN3-202ENST00000393459 CX3CL1P78423 397 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 SSBP2P81877 361 aaPredicted RBP11.95□□□□□ -0.5
SFXN3-202ENST00000393459 VWC2Q2TAL6 325 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 SAPCD1Q5SSQ6 148 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 PPP1R32Q7Z5V6 425 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 SPACA3Q8IXA5 215 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 OR8B3Q8NGG8 313 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 TRIB1Q96RU8 372 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 IGKV1OR2-108A0A075B7D4 117 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 IGHV2OR16-5A0A0B4J2B6 119 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 C19orf35Q6ZS72 473 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 Q71RC1 249 aaPredicted RBP11.95□□□□□ -0.5
SFXN3-202ENST00000393459 SH2D2AQ9NP31 389 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 HILPDAQ9Y5L2 63 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 PTPRZ1P23471 2315 aaPredicted RBP11.95□□□□□ -0.5
SFXN3-202ENST00000393459 OOEPA6NGQ2 149 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 DUTP33316 252 aaKnown RBP11.95□□□□□ -0.5
SFXN3-202ENST00000393459 OPRK1P41145 380 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 OR2Z1Q8NG97 314 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 TAAR6Q96RI8 345 aa11.95□□□□□ -0.5
SFXN3-202ENST00000393459 HIGD1CA8MV81 97 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 NTN3O00634 580 aaPredicted RBP11.94□□□□□ -0.5
SFXN3-202ENST00000393459 TBC1D28Q2M2D7 210 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 SPRNQ5BIV9 151 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 ABHD17BQ5VST6 288 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 LRRC29Q8WV35 223 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 MBNL3Q9NUK0 354 aaKnown RBP11.94□□□□□ -0.5
SFXN3-202ENST00000393459 TTC28Q96AY4 2481 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 COL12A1Q99715 3063 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 ZNF207O43670 478 aaKnown RBP11.94□□□□□ -0.5
SFXN3-202ENST00000393459 AMY1AP04745 511 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 ARR3P36575 388 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 UBE2G1P62253 170 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 Q0VG73 95 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 WFDC3Q8IUB2 231 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 MUC15Q8N387 334 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 TMEM251Q8N6I4 163 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 KLF14Q8TD94 323 aaPredicted RBP11.94□□□□□ -0.5
SFXN3-202ENST00000393459 PGLYRP4Q96LB8 373 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 GNB1LQ9BYB4 327 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 FNDC4Q9H6D8 234 aaPredicted RBP11.94□□□□□ -0.5
SFXN3-202ENST00000393459 IL19Q9UHD0 177 aa11.94□□□□□ -0.5
SFXN3-202ENST00000393459 ANKRD39Q53RE8 183 aa11.93□□□□□ -0.5
SFXN3-202ENST00000393459 FAM214BQ7L5A3 538 aa11.93□□□□□ -0.5
SFXN3-202ENST00000393459 MOB1BQ7L9L4 216 aa11.93□□□□□ -0.5
SFXN3-202ENST00000393459 TMEM45BQ96B21 275 aa11.93□□□□□ -0.5
SFXN3-202ENST00000393459 TTTY12Q9BZ98 90 aa11.93□□□□□ -0.5
SFXN3-202ENST00000393459 ACACAQ13085 2346 aa11.93□□□□□ -0.5
SFXN3-202ENST00000393459 ISLRO14498 428 aa11.93□□□□□ -0.5
SFXN3-202ENST00000393459 C10orf55Q5SWW7 151 aa11.93□□□□□ -0.5
SFXN3-202ENST00000393459 TEX45Q8NA69 505 aa11.93□□□□□ -0.5
SFXN3-202ENST00000393459 BOKQ9UMX3 212 aaPredicted RBP11.93□□□□□ -0.5
SFXN3-202ENST00000393459 MT-CO2P00403 227 aa11.92□□□□□ -0.5
SFXN3-202ENST00000393459 RAB31Q13636 194 aa11.92□□□□□ -0.5
SFXN3-202ENST00000393459 NUP35Q8NFH5 326 aa11.92□□□□□ -0.5
SFXN3-202ENST00000393459 CST9LQ9H4G1 147 aa11.92□□□□□ -0.5
SFXN3-202ENST00000393459 SMPD2O60906 423 aa11.92□□□□□ -0.5
SFXN3-202ENST00000393459 P0C879 139 aa11.92□□□□□ -0.5
SFXN3-202ENST00000393459 ORM2P19652 201 aa11.92□□□□□ -0.5
SFXN3-202ENST00000393459 TRIP6Q15654 476 aaKnown RBP11.92□□□□□ -0.5
SFXN3-202ENST00000393459 DCAF12Q5T6F0 453 aa11.92□□□□□ -0.5
SFXN3-202ENST00000393459 K7EMI3 77 aa11.92□□□□□ -0.5
SFXN3-202ENST00000393459 IGKV1-16P04430 117 aa11.92□□□□□ -0.5
SFXN3-202ENST00000393459 SRSF7Q16629 238 aaKnown RBP eCLIP11.92□□□□□ -0.5
SFXN3-202ENST00000393459 CD177Q8N6Q3 437 aa11.92□□□□□ -0.5
SFXN3-202ENST00000393459 ARL6IP6Q8N6S5 226 aa11.92□□□□□ -0.5
SFXN3-202ENST00000393459 ORAOV1Q8WV07 137 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms