RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 ZNF207O43670 478 aaKnown RBP5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 B3GALNT1O75752 331 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 ATG12O94817 140 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 MT-CO2P00403 227 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 IL7P13232 177 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 FOLR2P14207 255 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 VAMP1P23763 118 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 BTCP35070 178 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 ADMP35318 185 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 INPP1P49441 399 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 CD69Q07108 199 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 PPP1R1AQ13522 171 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 TATDN3Q17R31 274 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 ANKRD55Q3KP44 614 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 CD300EQ496F6 205 aaPredicted RBP5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 FAM209BQ5JX69 171 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 PLET1Q6UQ28 207 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 ZNF114Q8NC26 417 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 OR1P1Q8NH06 330 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 VN1R17PQ8TDU5 208 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 ZNF414Q96IQ9 312 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 SCGB3A2Q96PL1 93 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 PDCD10Q9BUL8 212 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 THYN1Q9P016 225 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 NDUFA13Q9P0J0 144 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 PEMTQ9UBM1 199 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 ZMAT5Q9UDW3 170 aaKnown RBP5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 FLVCR2Q9UPI3 526 aa5.81□□□□□ -1.48
HMGB3P1-201ENST00000393368 RNASE2P10153 161 aaKnown RBP5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 ERHP84090 104 aaKnown RBP5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 MLANAQ16655 118 aa5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 CNPY1Q3B7I2 92 aa5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 GPHB5Q86YW7 130 aa5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 FAM219AQ8IW50 185 aa5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 UXS1Q8NBZ7 420 aa5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 DYNLRB2Q8TF09 96 aa5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 WDR89Q96FK6 387 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 GALNT14Q96FL9 552 aa5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 B9D2Q9BPU9 175 aa5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 C20orf24Q9BUV8 137 aa5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 CTNNBIP1Q9NSA3 81 aaPredicted RBP5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 MRPL36Q9P0J6 103 aaKnown RBP5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 MLXQ9UH92 298 aa5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 KCNIP3Q9Y2W7 256 aa5.8□□□□□ -1.48
HMGB3P1-201ENST00000393368 IGHV3-49A0A0A0MS15 119 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 A0A0B4J2A0 478 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 A6NHS1 94 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 CEBPZOSA8MTT3 80 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 A8MWP6 167 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 LGALS9O00182 355 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 CTSGP08311 255 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 SULT1A3P0DMM9 295 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 SULT1A4P0DMN0 295 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 ANXA3P12429 323 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 ANXA7P20073 488 aaKnown RBP5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 CBLN1P23435 193 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 SNCAP37840 140 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 SPCS3P61009 180 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 RBMS2Q15434 407 aaKnown RBP5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 GUCA2BQ16661 112 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 DEFB114Q30KQ6 69 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 FAM106AQ4KMX7 169 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 AARDQ4LEZ3 155 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 NMSQ5H8A3 153 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 BTNL8Q6UX41 500 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 LGI3Q8N145 548 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 Q8N1Y9 231 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 CENPSQ8N2Z9 138 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 OR1L6Q8NGR2 347 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 TMEM170AQ8WVE7 144 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 TMEM190Q8WZ59 177 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 IL22RA2Q969J5 263 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 BSCL2Q96G97 398 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 ZNF436Q9C0F3 470 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 WFDC10AQ9H1F0 79 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 FNDC4Q9H6D8 234 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 ENY2Q9NPA8 101 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 HEYLQ9NQ87 328 aaPredicted RBP5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 SHPKQ9UHJ6 478 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 SMAD5-AS1Q9Y6J3 95 aa5.79□□□□□ -1.48
HMGB3P1-201ENST00000393368 IGHV3OR16-13A0A075B7E8 117 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 IGHV3-74A0A0B4J1X5 117 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 ZNF785A8K8V0 405 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 INS-IGF2F8WCM5 200 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 PLA2G10O15496 165 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 YIF1AO95070 293 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 SCAF4O95104 1147 aaKnown RBP5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 NDUFB6O95139 128 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 SFT2D2O95562 160 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 HOXB5P09067 269 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 CD7P09564 240 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 FRMD6-AS1P0C7T7 363 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 IGHV4-30-4P0DP06 118 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 OPRK1P41145 380 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 MFAP4P55083 255 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 TNFRSF9Q07011 255 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 SMCO1Q147U7 214 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 BSXQ3C1V8 233 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 TMEM128Q5BJH2 165 aa5.78□□□□□ -1.48
HMGB3P1-201ENST00000393368 LCN12Q6JVE5 192 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms