RNA–Protein interactions for RNA: ENST00000392455.7

CCDC50-201, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC50, Length 8,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-201ENST00000392455 GFRA3O60609 400 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 UBR3Q6ZT12 1888 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 HAX1O00165 279 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 NMBP08949 121 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 NEU4Q8WWR8 484 aaPredicted RBP12.54□□□□□ -0.4
CCDC50-201ENST00000392455 C14orf144Q96I85 54 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 DUSP15Q9H1R2 295 aaPredicted RBP12.54□□□□□ -0.4
CCDC50-201ENST00000392455 HIGD1CA8MV81 97 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 H3BUT2 72 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 ICAM4Q14773 271 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 UBE2DNLQ8IWF7 75 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 SBF1O95248 1867 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 PGLYRP1O75594 196 aaPredicted RBP12.54□□□□□ -0.4
CCDC50-201ENST00000392455 LAGE3Q14657 143 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 NRN1Q9NPD7 142 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 C9orf40Q8IXQ3 194 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 CD28P10747 220 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 AQP3Q92482 292 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 VKORC1Q9BQB6 163 aa12.54□□□□□ -0.4
CCDC50-201ENST00000392455 NPIPB13A6NJU9 1138 aa12.53□□□□□ -0.4
CCDC50-201ENST00000392455 LINC00158P58513 81 aa12.53□□□□□ -0.4
CCDC50-201ENST00000392455 KLK13Q9UKR3 277 aa12.53□□□□□ -0.4
CCDC50-201ENST00000392455 CD160O95971 181 aa12.53□□□□□ -0.4
CCDC50-201ENST00000392455 TRGV4A0A0C4DH28 118 aa12.53□□□□□ -0.4
CCDC50-201ENST00000392455 GATD1Q8NB37 220 aa12.53□□□□□ -0.4
CCDC50-201ENST00000392455 CCL13Q99616 98 aa12.53□□□□□ -0.4
CCDC50-201ENST00000392455 OR52E5Q8NH55 327 aa12.53□□□□□ -0.4
CCDC50-201ENST00000392455 KLK2P20151 261 aa12.53□□□□□ -0.4
CCDC50-201ENST00000392455 RNASE4P34096 147 aaKnown RBP12.53□□□□□ -0.4
CCDC50-201ENST00000392455 UNC119Q13432 240 aa12.53□□□□□ -0.4
CCDC50-201ENST00000392455 APCDD1LQ8NCL9 501 aa12.53□□□□□ -0.4
CCDC50-201ENST00000392455 CITED1Q99966 193 aa12.53□□□□□ -0.4
CCDC50-201ENST00000392455 MRPS18BQ9Y676 258 aaKnown RBP12.53□□□□□ -0.4
CCDC50-201ENST00000392455 SRD5A1P18405 259 aa12.52□□□□□ -0.4
CCDC50-201ENST00000392455 TMEM155Q4W5P6 130 aa12.52□□□□□ -0.4
CCDC50-201ENST00000392455 RALGAPA2Q2PPJ7 1873 aa12.52□□□□□ -0.4
CCDC50-201ENST00000392455 NDUFC2O95298 119 aa12.52□□□□□ -0.4
CCDC50-201ENST00000392455 LDLRAD2Q5SZI1 272 aa12.52□□□□□ -0.4
CCDC50-201ENST00000392455 RASL10AQ92737 203 aa12.52□□□□□ -0.4
CCDC50-201ENST00000392455 C2orf82Q6UX34 121 aa12.52□□□□□ -0.4
CCDC50-201ENST00000392455 UBE2WQ96B02 151 aa12.52□□□□□ -0.4
CCDC50-201ENST00000392455 PVRIGQ6DKI7 326 aa12.52□□□□□ -0.41
CCDC50-201ENST00000392455 A0A087WX48 190 aa12.52□□□□□ -0.41
CCDC50-201ENST00000392455 GRIFINA4D1Z8 144 aa12.52□□□□□ -0.41
CCDC50-201ENST00000392455 CCL8P80075 99 aa12.52□□□□□ -0.41
CCDC50-201ENST00000392455 RUNX1Q01196 453 aa12.52□□□□□ -0.41
CCDC50-201ENST00000392455 ZNF721Q8TF20 911 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 C21orf62Q9NYP8 219 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 TRAV2A0A0B4J234 112 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 ZIC4Q8N9L1 334 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 NDUFAF3Q9BU61 184 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 SMRP1Q8NCR6 262 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 ZNF385AQ96PM9 386 aaKnown RBP12.51□□□□□ -0.41
CCDC50-201ENST00000392455 WNT10AQ9GZT5 417 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 TRBV20-1A0A075B6N2 111 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 PAX4O43316 350 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 ZNF660Q6AZW8 331 aaPredicted RBP12.51□□□□□ -0.41
CCDC50-201ENST00000392455 C1QTNF4Q9BXJ3 329 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 FAM166AQ6J272 317 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 SHANK3Q9BYB0 1731 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 PSCAO43653 123 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 MOSP00540 346 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 CD7P09564 240 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 FHL5Q5TD97 284 aa12.51□□□□□ -0.41
CCDC50-201ENST00000392455 SCARF2Q96GP6 870 aaPredicted RBP12.51□□□□□ -0.41
CCDC50-201ENST00000392455 FGF11Q92914 225 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 ZAR1Q86SH2 424 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 PLSCR4Q9NRQ2 329 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 EREGO14944 169 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 ESDP10768 282 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 NEGR1Q7Z3B1 354 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 UBL5Q9BZL1 73 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 A0A1W2PPC1 479 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 CACNA1HO95180 2353 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 A0A1W2PPV9 198 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 ZNF250P15622 560 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 ZNRF1Q8ND25 227 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 H0YL77 283 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 PEBP1P30086 187 aaKnown RBP12.5□□□□□ -0.41
CCDC50-201ENST00000392455 ZP1P60852 638 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 DPM3Q9P2X0 92 aa12.5□□□□□ -0.41
CCDC50-201ENST00000392455 GZMBP10144 247 aa12.49□□□□□ -0.41
CCDC50-201ENST00000392455 FNDC4Q9H6D8 234 aaPredicted RBP12.49□□□□□ -0.41
CCDC50-201ENST00000392455 C9orf153Q5TBE3 101 aa12.49□□□□□ -0.41
CCDC50-201ENST00000392455 PRSS23O95084 383 aa12.49□□□□□ -0.41
CCDC50-201ENST00000392455 OR13A1Q8NGR1 328 aa12.49□□□□□ -0.41
CCDC50-201ENST00000392455 A0A1W2PRS3 328 aa12.49□□□□□ -0.41
CCDC50-201ENST00000392455 FAM90A9PA6NNJ1 464 aa12.49□□□□□ -0.41
CCDC50-201ENST00000392455 SNRPCP09234 159 aaKnown RBP12.49□□□□□ -0.41
CCDC50-201ENST00000392455 IRF3Q14653 427 aa12.49□□□□□ -0.41
CCDC50-201ENST00000392455 OVOL1O14753 267 aa12.49□□□□□ -0.41
CCDC50-201ENST00000392455 CARHSP1Q9Y2V2 147 aaKnown RBP12.49□□□□□ -0.41
CCDC50-201ENST00000392455 SOCS3O14543 225 aa12.49□□□□□ -0.41
CCDC50-201ENST00000392455 IGHV1-69-2A0A0G2JMI3 117 aa12.48□□□□□ -0.41
CCDC50-201ENST00000392455 HLA-DQB1P01920 261 aa12.48□□□□□ -0.41
CCDC50-201ENST00000392455 IGHV3-72A0A0B4J1Y9 119 aa12.48□□□□□ -0.41
CCDC50-201ENST00000392455 TRAV5A0A0B4J249 113 aa12.48□□□□□ -0.41
CCDC50-201ENST00000392455 IQCF6A8MYZ5 107 aa12.48□□□□□ -0.41
CCDC50-201ENST00000392455 SNHG12Q9BXW3 62 aa12.48□□□□□ -0.41
CCDC50-201ENST00000392455 MYMXA0A1B0GTQ4 84 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms