RNA–Protein interactions for RNA: ENST00000391057.1

RNU6-550P-201, Transcript of RNA, U6 small nuclear 550, pseudogene, humanhuman

BASIC

Gene RNU6-550P, Length 101 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-550P-201ENST00000391057 IGKV1-5P01602 117 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 ISG15P05161 165 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 OR5G3P0C626 314 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 PDE6HQ13956 83 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 GDF5OSQ5U4N7 250 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 CD200R1LQ6Q8B3 271 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 KRTAP19-3Q7Z4W3 81 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 CLVS1Q8IUQ0 354 aaPredicted RBP0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 OR51D1Q8NGF3 324 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 OR13C4Q8NGS5 318 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 MRPL30Q8TCC3 161 aaKnown RBP0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 DNAJC9Q8WXX5 260 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 TMEM147Q9BVK8 224 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 ULBP3Q9BZM4 244 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 XPNPEP1Q9NQW7 623 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 ACER3Q9NUN7 267 aa0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 TNRC6BQ9UPQ9 1833 aaKnown RBP0.4□□□□□ -2.35
RNU6-550P-201ENST00000391057 CCDC88AQ3V6T2 1871 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 TRAV1-1A0A0B4J248 108 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 EEF1E1-BLOC1S5C9J1V9 151 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 M0R2N4 97 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 DCTN3O75935 186 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 TPM3P06753 285 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 COX6A1P12074 109 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 MIFP14174 115 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 AP2S1P53680 142 aaPredicted RBP0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 RHEBQ15382 184 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 KHDC3LQ587J8 217 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 HIST2H3PS2Q5TEC6 136 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 LPCAT4Q643R3 524 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 MIR17HGQ75NE6 70 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 LRRC25Q8N386 305 aaPredicted RBP0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 OR5A1Q8NGJ0 315 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 OPTNQ96CV9 577 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 MIXL1Q9H2W2 232 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 TP73-AS1Q9UF72 201 aa0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 ZNF469Q96JG9 3925 aaPredicted RBP0.39□□□□□ -2.35
RNU6-550P-201ENST00000391057 C9orf84Q5VXU9 1444 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 COL4A5P29400 1685 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 TRBV6-8A0A0A6YYG3 113 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 PQLC2LA1A4F0 135 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 UBL3O95164 117 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 TCL1BO95988 128 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 BAALC-AS2P0C853 105 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 SSR2P43308 183 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 CNBPP62633 177 aaKnown RBP0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 RHOGP84095 191 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 ALKAL1Q6UXT8 129 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 SBSPONQ8IVN8 264 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 TERB2Q8NHR7 220 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 IMP4Q96G21 291 aaKnown RBP0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 COMMD5Q9GZQ3 224 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 PRTFDC1Q9NRG1 225 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 SLC39A9Q9NUM3 307 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 CMTM6Q9NX76 183 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 FBXL12Q9NXK8 326 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 TAS2R4Q9NYW5 299 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 ATP6V1DQ9Y5K8 247 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 RIC1Q4ADV7 1423 aa0.38□□□□□ -2.35
RNU6-550P-201ENST00000391057 LAMA4Q16363 1823 aa0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 IFNA10P01566 189 aa0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 HLA-DRB1P01911 266 aa0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 TPM4P67936 248 aa0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 RNASE10Q5GAN6 216 aaKnown RBP0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 LPCAT3Q6P1A2 487 aa0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 Q8N6K4 173 aa0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 SFT2D1Q8WV19 159 aa0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 SLC35B4Q969S0 331 aa0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 AMELYQ99218 206 aa0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 NIPSNAP1Q9BPW8 284 aa0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 NKIRAS1Q9NYS0 192 aa0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 TOPBP1Q92547 1522 aa0.37□□□□□ -2.35
RNU6-550P-201ENST00000391057 KCNK1O00180 336 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 PSMD12O00232 456 aaPredicted RBP0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 INE1O15225 51 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 SULT1B1O43704 296 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 OR2B3O76000 313 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 TNNC2P02585 160 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 CALB1P05937 261 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 MGST1P10620 155 aaKnown RBP0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 HIST3H3Q16695 136 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 C20orf196Q8IYI0 205 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 HIST3H2BBQ8N257 126 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 SIGLECL1Q8N7X8 197 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 H1FXQ92522 213 aaKnown RBP0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 TOMM6Q96B49 74 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 OR52E6Q96RD3 313 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 MRPS26Q9BYN8 205 aaKnown RBP0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 C11orf68Q9H3H3 251 aaKnown RBP0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 RASL12Q9NYN1 266 aa0.36□□□□□ -2.35
RNU6-550P-201ENST00000391057 TRAV9-1A0A075B6T8 112 aa0.35□□□□□ -2.35
RNU6-550P-201ENST00000391057 TRAV12-1A0A0B4J245 112 aa0.35□□□□□ -2.35
RNU6-550P-201ENST00000391057 DPRXA6NFQ7 191 aa0.35□□□□□ -2.35
RNU6-550P-201ENST00000391057 TGOLN2O43493 480 aa0.35□□□□□ -2.35
RNU6-550P-201ENST00000391057 PROSCO94903 275 aa0.35□□□□□ -2.35
RNU6-550P-201ENST00000391057 PSME3P61289 254 aa0.35□□□□□ -2.35
RNU6-550P-201ENST00000391057 SNRPD2P62316 118 aaKnown RBP0.35□□□□□ -2.35
RNU6-550P-201ENST00000391057 ANKRD29Q8N6D5 301 aa0.35□□□□□ -2.35
RNU6-550P-201ENST00000391057 BORCS5Q969J3 196 aa0.35□□□□□ -2.35
RNU6-550P-201ENST00000391057 PTH2Q96A98 100 aa0.35□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 145.7 ms