RNA–Protein interactions for RNA: ENST00000389328.8

TRAPPC9-201, Transcript of trafficking protein particle complex 9, humanhuman

TSL 2 BASIC

Gene TRAPPC9, Length 4,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-201ENST00000389328 INSIG2Q9Y5U4 225 aa10.94□□□□□ -0.66
TRAPPC9-201ENST00000389328 C15orf62A8K5M9 175 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 PLP1P60201 277 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 ARF6P62330 175 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 IDI2-AS1Q9NZ38 188 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 ARHGAP21Q5T5U3 1957 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 GPX1P07203 203 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 CECR9P0C854 216 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 RPL27AP46776 148 aaKnown RBP10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 TMEM144Q7Z5S9 345 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 AP5S1Q9NUS5 200 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 CRIM1Q9NZV1 1036 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 ONECUT1Q9UBC0 465 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 GNG7O60262 68 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 IGLV3-1P01715 115 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 LIPFP07098 398 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 GCSHP23434 173 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 PRSS8Q16651 343 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 Q6P435 159 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 Q6ZWC4 215 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 CDC42EP3Q9UKI2 254 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 UFC1Q9Y3C8 167 aa10.93□□□□□ -0.66
TRAPPC9-201ENST00000389328 M0R296 226 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 MORN2Q502X0 79 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 ZNF841Q6ZN19 808 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 MRPL32Q9BYC8 188 aaKnown RBP10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 TRAV5A0A0B4J249 113 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 NBEAP1P0C6P0 100 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 HEATR1Q9H583 2144 aaKnown RBP10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 WDR82Q6UXN9 313 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 SSC4DQ8WTU2 575 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 ZNF714Q96N38 554 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 METRNQ9UJH8 293 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 ZNF106Q9H2Y7 1883 aaKnown RBP10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 BDP1A6H8Y1 2624 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 J3QW42 95 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 ZNF207O43670 478 aaKnown RBP10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 PRB4P10163 310 aaPredicted RBP10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 OR10J3Q5JRS4 329 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 TMEM116Q8NCL8 245 aa10.92□□□□□ -0.66
TRAPPC9-201ENST00000389328 IQCF6A8MYZ5 107 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 SFTPCP11686 197 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 MYOD1P15172 320 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 IGHV1-2P23083 117 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 PRRX1P54821 245 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 OR10AG1Q8NH19 301 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 FBXL7Q9UJT9 491 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 MUC21A0A0G2JKD1 596 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 MUC21A0A140T8X8 626 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 C15orf61A6NNL5 157 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 S100A4P26447 101 aaKnown RBP10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 B3GALT5-AS1P59052 145 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 MUC21Q5SSG8 566 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 LHFPL4Q7Z7J7 247 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 SNRNP40Q96DI7 357 aaKnown RBP10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 GUCD1Q96NT3 240 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 PEF1Q9UBV8 284 aaKnown RBP10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 USF3Q68DE3 2245 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 SAA2-SAA4A0A096LPE2 208 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 TRBV6-6A0A0A6YYG2 114 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 SAA2P0DJI9 122 aaPredicted RBP10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 TM4SF20Q53R12 229 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 PET117Q6UWS5 81 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 Q6ZT83 130 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 C20orf144Q9BQM9 153 aa10.91□□□□□ -0.66
TRAPPC9-201ENST00000389328 PPIAL4DF5H284 164 aa10.9□□□□□ -0.66
TRAPPC9-201ENST00000389328 FABP2P12104 132 aa10.9□□□□□ -0.66
TRAPPC9-201ENST00000389328 CKS2P33552 79 aa10.9□□□□□ -0.66
TRAPPC9-201ENST00000389328 HOXA4Q00056 320 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC9-201ENST00000389328 DTX1Q86Y01 620 aa10.9□□□□□ -0.66
TRAPPC9-201ENST00000389328 FAM216BQ8N7L0 139 aa10.9□□□□□ -0.66
TRAPPC9-201ENST00000389328 CREBBPQ92793 2442 aa10.9□□□□□ -0.66
TRAPPC9-201ENST00000389328 TYMSP04818 313 aa10.9□□□□□ -0.66
TRAPPC9-201ENST00000389328 TWIST1Q15672 202 aa10.9□□□□□ -0.66
TRAPPC9-201ENST00000389328 COL25A1Q9BXS0 654 aaPredicted RBP10.9□□□□□ -0.66
TRAPPC9-201ENST00000389328 APOHP02749 345 aaPredicted RBP10.9□□□□□ -0.67
TRAPPC9-201ENST00000389328 IGKV3D-15A0A087WSY6 115 aa10.89□□□□□ -0.67
TRAPPC9-201ENST00000389328 NOTCH3Q9UM47 2321 aa10.89□□□□□ -0.67
TRAPPC9-201ENST00000389328 TMEM189A5PLL7 270 aa10.89□□□□□ -0.67
TRAPPC9-201ENST00000389328 NKX2-8O15522 239 aa10.89□□□□□ -0.67
TRAPPC9-201ENST00000389328 GFRA1P56159 465 aa10.89□□□□□ -0.67
TRAPPC9-201ENST00000389328 OR10W1Q8NGF6 305 aa10.89□□□□□ -0.67
TRAPPC9-201ENST00000389328 OR4C13Q8NGP0 309 aa10.89□□□□□ -0.67
TRAPPC9-201ENST00000389328 RAB1CQ92928 201 aa10.89□□□□□ -0.67
TRAPPC9-201ENST00000389328 PCNX3Q9H6A9 2034 aa10.89□□□□□ -0.67
TRAPPC9-201ENST00000389328 PPIAL4EA0A075B759 164 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 A0A1W2PRE2 83 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 SCGB1C2P0DMR2 95 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 PPIAL4FP0DN26 164 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 CX3CL1P78423 397 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 LINC00479Q96M42 142 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 SCNM1Q9BWG6 230 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 RPP21Q9H633 154 aaKnown RBP10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 HILPDAQ9Y5L2 63 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 C9JCJ5 164 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 GFRA3O60609 400 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 TSPOP30536 169 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 RBPJQ06330 500 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 MPV17L2Q567V2 206 aa10.88□□□□□ -0.67
TRAPPC9-201ENST00000389328 WFDC3Q8IUB2 231 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms