RNA–Protein interactions for RNA: ENST00000389194.6

LTN1-202, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 7,749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-202ENST00000389194 HIST1H2BKO60814 126 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 HIST1H2BJP06899 126 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 NBEAP1P0C6P0 100 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 HIST1H2BOP23527 126 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 HIST1H2BBP33778 126 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 ADMP35318 185 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 RPL13AP40429 203 aaKnown RBP4.17□□□□□ -1.74
LTN1-202ENST00000389194 TMPRSS3P57727 454 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 HIST1H2BDP58876 126 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 HIST1H2BCP62807 126 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 CX3CL1P78423 397 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 HIST2H2BEQ16778 126 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.17□□□□□ -1.74
LTN1-202ENST00000389194 HIST1H2BHQ93079 126 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 C18orf12Q96KH6 178 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 HIST1H2BNQ99877 126 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 HIST1H2BMQ99879 126 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 CCDC168Q8NDH2 2452 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 A0A0G2JRQ6 117 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 A0A1W2PRX2 142 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 J3QR89 54 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 SAA1P0DJI8 122 aaPredicted RBP4.17□□□□□ -1.74
LTN1-202ENST00000389194 ZNF506Q5JVG8 444 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 WDR82Q6UXN9 313 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 SLC25A33Q9BSK2 321 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 HIST1H1AQ02539 215 aaPredicted RBP4.17□□□□□ -1.74
LTN1-202ENST00000389194 PHLDA3Q9Y5J5 127 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 NLRC5Q86WI3 1866 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 LOC105371242A0A075B767 164 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 ANOS1P23352 680 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 ASCL5Q7RTU5 278 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 ZCCHC14Q8WYQ9 949 aaKnown RBP4.17□□□□□ -1.74
LTN1-202ENST00000389194 TMEM45BQ96B21 275 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 GALNT14Q96FL9 552 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 TMEM106BQ9NUM4 274 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 RNF115Q9Y4L5 304 aa4.17□□□□□ -1.74
LTN1-202ENST00000389194 DPRXA6NFQ7 191 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 HIGD1CA8MV81 97 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 LINC00271P0C7V0 271 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 EVI2AP22794 236 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 ATP5J2P56134 94 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 CLEC19AQ6UXS0 136 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 CYP2G1PQ6ZSU1 146 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 GCSAMQ8N6F7 178 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 OR4D5Q8NGN0 318 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 OCC1Q8TAD7 63 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 IGFBPL1Q8WX77 278 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 JPT1Q9UK76 154 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 SETD2Q9BYW2 2564 aaPredicted RBP4.16□□□□□ -1.74
LTN1-202ENST00000389194 GAGE10A6NGK3 116 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 NDUFS6O75380 124 aaKnown RBP4.16□□□□□ -1.74
LTN1-202ENST00000389194 EFEMP2O95967 443 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 PDLIM4P50479 330 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 GGNQ86UU5 652 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 SDF2L1Q9HCN8 221 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 CYTL1Q9NRR1 136 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 CARHSP1Q9Y2V2 147 aaKnown RBP4.16□□□□□ -1.74
LTN1-202ENST00000389194 LOC390937A0A1W2PQ73 354 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 MARVELD3Q96A59 401 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 NABP1Q96AH0 204 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 FHL1Q13642 323 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 TMEM183AQ8IXX5 376 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 METTL26Q96S19 204 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 DIRC2Q96SL1 478 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 HIST1H4GQ99525 98 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 CLEC7AQ9BXN2 247 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 PARD6GQ9BYG4 376 aaPredicted RBP4.16□□□□□ -1.74
LTN1-202ENST00000389194 TSC2P49815 1807 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 TRBV20OR9-2A0A075B6H5 130 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 MPDU1O75352 247 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 GPX1P07203 203 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 ADCYAP1P18509 176 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 REG4Q9BYZ8 158 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 FOXD3Q9UJU5 478 aaPredicted RBP4.16□□□□□ -1.74
LTN1-202ENST00000389194 KIF26AQ9ULI4 1882 aaPredicted RBP4.16□□□□□ -1.74
LTN1-202ENST00000389194 TRBV6-7A0A0A0MS04 114 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 APOHP02749 345 aaPredicted RBP4.16□□□□□ -1.74
LTN1-202ENST00000389194 TYMSP04818 313 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 FAM106CPP0CH98 169 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 GLRXP35754 106 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 ZNF138P52744 262 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 MFAP4P55083 255 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 KLRD1Q13241 179 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 HERPUD1Q15011 391 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 FAM71F2Q6NXP2 309 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 Q6ZRM9 215 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 JKAMPQ9P055 326 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 TMEM56-RWDD3S4R434 201 aa4.16□□□□□ -1.74
LTN1-202ENST00000389194 MLNRO43193 412 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 HLA-DQA1P01909 254 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 MC5RP33032 325 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 EMP1P54849 157 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 LCN12Q6JVE5 192 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 TMEM256Q8N2U0 113 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 LINC00479Q96M42 142 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 IFI27L2Q9H2X8 130 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 PNRC2Q9NPJ4 139 aaKnown RBP4.15□□□□□ -1.74
LTN1-202ENST00000389194 LAMA3Q16787 3333 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 TRAV8-1A0A0A6YYK1 113 aa4.15□□□□□ -1.74
LTN1-202ENST00000389194 KBTBD11-OT1A0A1B0GTJ5 212 aa4.15□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms