RNA–Protein interactions for RNA: ENST00000388940.8

SCFD2-201, Transcript of sec1 family domain containing 2, humanhuman

TSL 2 BASIC

Gene SCFD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2-201ENST00000388940 UNQ6494/PRO21346Q6UXR6 183 aa12.14□□□□□ -0.47
SCFD2-201ENST00000388940 RNASEH2CQ8TDP1 164 aaKnown RBP12.14□□□□□ -0.47
SCFD2-201ENST00000388940 PACRGQ96M98 296 aaPredicted RBP12.14□□□□□ -0.47
SCFD2-201ENST00000388940 NDUFAF3Q9BU61 184 aa12.14□□□□□ -0.47
SCFD2-201ENST00000388940 AURKAIP1Q9NWT8 199 aaPredicted RBP12.14□□□□□ -0.47
SCFD2-201ENST00000388940 A0A1W2PN81 502 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 XKRY2A2RUG3 117 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 PGPEP1LA6NFU8 196 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 OR10J1P30954 320 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 TEX38Q6PEX7 206 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 PQLC2Q6ZP29 291 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 H1FXQ92522 213 aaKnown RBP12.13□□□□□ -0.47
SCFD2-201ENST00000388940 SH3BGRL2Q9UJC5 107 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 NBEAQ8NFP9 2946 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 TRAV9-1A0A075B6T8 112 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 E7EQL1 145 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 DVL1O14640 695 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 LOXP28300 417 aaPredicted RBP12.13□□□□□ -0.47
SCFD2-201ENST00000388940 MOB3BQ86TA1 216 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 SPACA3Q8IXA5 215 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 OR10W1Q8NGF6 305 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 OR10G8Q8NGN5 311 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 OR10X1Q8NGY0 326 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 FAM122AQ96E09 287 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 CTSZQ9UBR2 303 aa12.13□□□□□ -0.47
SCFD2-201ENST00000388940 AKAP13Q12802 2813 aa12.12□□□□□ -0.47
SCFD2-201ENST00000388940 A8MWP6 167 aa12.12□□□□□ -0.47
SCFD2-201ENST00000388940 CHRNB4P30926 498 aa12.12□□□□□ -0.47
SCFD2-201ENST00000388940 TMEM155Q4W5P6 130 aa12.12□□□□□ -0.47
SCFD2-201ENST00000388940 SGMS2Q8NHU3 365 aa12.12□□□□□ -0.47
SCFD2-201ENST00000388940 RIF1Q5UIP0 2472 aaKnown RBP12.12□□□□□ -0.47
SCFD2-201ENST00000388940 A0A0U1RQK1 487 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 ZNF320A2RRD8 509 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 ACTL6BO94805 426 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 IGLV2-23P01705 113 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 LINC00614P0C842 121 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 TAS2R45P59539 299 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 RBPJQ06330 500 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 PSG5Q15238 335 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 OR9G1Q8NH87 305 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 TMEM37Q8WXS4 190 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 ZNF503Q96F45 646 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 RNF2Q99496 336 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 WASHC3Q9Y3C0 194 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 RP1L1Q8IWN7 2480 aaPredicted RBP12.11□□□□□ -0.47
SCFD2-201ENST00000388940 K7ENP7 123 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 AMBPP02760 352 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 MC5RP33032 325 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 GAGE1Q13065 139 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 MLANAQ16655 118 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 HLA-DRB5Q30154 266 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 MRPL32Q9BYC8 188 aaKnown RBP12.11□□□□□ -0.47
SCFD2-201ENST00000388940 DYNLRB1Q9NP97 96 aa12.11□□□□□ -0.47
SCFD2-201ENST00000388940 REG1BP48304 166 aa12.1□□□□□ -0.47
SCFD2-201ENST00000388940 EAF1Q96JC9 268 aaPredicted RBP12.1□□□□□ -0.47
SCFD2-201ENST00000388940 PRO1933Q9H354 126 aa12.1□□□□□ -0.47
SCFD2-201ENST00000388940 PSMB11A5LHX3 300 aa12.1□□□□□ -0.47
SCFD2-201ENST00000388940 CGB1A6NKQ9 187 aa12.1□□□□□ -0.47
SCFD2-201ENST00000388940 K7EN84 100 aa12.1□□□□□ -0.47
SCFD2-201ENST00000388940 APOBEC3AP31941 199 aaPredicted RBP12.1□□□□□ -0.47
SCFD2-201ENST00000388940 YPEL3P61236 119 aaPredicted RBP12.1□□□□□ -0.47
SCFD2-201ENST00000388940 JOSD1Q15040 202 aaPredicted RBP12.1□□□□□ -0.47
SCFD2-201ENST00000388940 VKORC1Q9BQB6 163 aa12.1□□□□□ -0.47
SCFD2-201ENST00000388940 SLC25A33Q9BSK2 321 aa12.1□□□□□ -0.47
SCFD2-201ENST00000388940 IL36BQ9NZH7 164 aa12.1□□□□□ -0.47
SCFD2-201ENST00000388940 TRAPPC1Q9Y5R8 145 aa12.1□□□□□ -0.47
SCFD2-201ENST00000388940 BOD1L1Q8NFC6 3051 aa12.1□□□□□ -0.47
SCFD2-201ENST00000388940 MGAQ8IWI9 3026 aa12.1□□□□□ -0.47
SCFD2-201ENST00000388940 A0A1W2PRE2 83 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 E7EUB6 86 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 C8orf88P0DMB2 117 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 IGHV1-8P0DP01 117 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 GATA2P23769 480 aaPredicted RBP12.09□□□□□ -0.47
SCFD2-201ENST00000388940 CNN1P51911 297 aaKnown RBP12.09□□□□□ -0.47
SCFD2-201ENST00000388940 SUB1P53999 127 aaKnown RBP eCLIP12.09□□□□□ -0.47
SCFD2-201ENST00000388940 DIAPH2-AS1Q14236 149 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 SAPCD1Q5SSQ6 148 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 IGHV1-69-2A0A0G2JMI3 117 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 B9A039 149 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 COL8A2P25067 703 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 LGALS7P47929 136 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 WT1-ASQ06250 92 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 VMA21Q3ZAQ7 101 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 PRR30Q53SZ7 412 aaPredicted RBP12.09□□□□□ -0.47
SCFD2-201ENST00000388940 C11orf42Q8N5U0 333 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 TNFRSF14Q92956 283 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 ZNF430Q9H8G1 570 aaPredicted RBP12.09□□□□□ -0.47
SCFD2-201ENST00000388940 GOLT1BQ9Y3E0 138 aa12.09□□□□□ -0.47
SCFD2-201ENST00000388940 ARFGEF3Q5TH69 2177 aa12.08□□□□□ -0.48
SCFD2-201ENST00000388940 HELTA6NFD8 242 aa12.08□□□□□ -0.48
SCFD2-201ENST00000388940 ACACAQ13085 2346 aa12.08□□□□□ -0.48
SCFD2-201ENST00000388940 OR2T6Q8NHC8 308 aa12.08□□□□□ -0.48
SCFD2-201ENST00000388940 CEP250Q9BV73 2442 aa12.08□□□□□ -0.48
SCFD2-201ENST00000388940 ZFHX2Q9C0A1 2572 aaPredicted RBP12.08□□□□□ -0.48
SCFD2-201ENST00000388940 OR7C2O60412 319 aa12.07□□□□□ -0.48
SCFD2-201ENST00000388940 FSTL3O95633 263 aa12.07□□□□□ -0.48
SCFD2-201ENST00000388940 OR10J4P0C629 311 aa12.07□□□□□ -0.48
SCFD2-201ENST00000388940 G0S2P27469 103 aa12.07□□□□□ -0.48
SCFD2-201ENST00000388940 TMEM133Q9H2Q1 129 aa12.07□□□□□ -0.48
SCFD2-201ENST00000388940 DNAJC4Q9NNZ3 241 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms