RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 EXOSC2Q13868 293 aaKnown RBP14.98□□□□□ -0.01
GTF3A-201ENST00000381140 Q5BKY6 102 aa14.98□□□□□ -0.01
GTF3A-201ENST00000381140 FAM223AQ8IWN6 122 aa14.98□□□□□ -0.01
GTF3A-201ENST00000381140 NECAP1Q8NC96 275 aa14.98□□□□□ -0.01
GTF3A-201ENST00000381140 HYLS1Q96M11 299 aa14.98□□□□□ -0.01
GTF3A-201ENST00000381140 SRSF8Q9BRL6 282 aaKnown RBP14.98□□□□□ -0.01
GTF3A-201ENST00000381140 S4R3C0 116 aa14.98□□□□□ -0.01
GTF3A-201ENST00000381140 TRBV9A0A0B4J1U6 114 aa14.97□□□□□ -0.01
GTF3A-201ENST00000381140 PITX3O75364 302 aa14.97□□□□□ -0.01
GTF3A-201ENST00000381140 HSPB1P04792 205 aaKnown RBP14.97□□□□□ -0.01
GTF3A-201ENST00000381140 EIF2B2P49770 351 aaKnown RBP14.97□□□□□ -0.01
GTF3A-201ENST00000381140 SMCO1Q147U7 214 aa14.97□□□□□ -0.01
GTF3A-201ENST00000381140 C15orf32Q32M92 178 aa14.97□□□□□ -0.01
GTF3A-201ENST00000381140 GSKIPQ9P0R6 139 aa14.97□□□□□ -0.01
GTF3A-201ENST00000381140 NOTCH1P46531 2555 aa14.96□□□□□ -0.01
GTF3A-201ENST00000381140 ST8SIA3O43173 380 aa14.96□□□□□ -0.02
GTF3A-201ENST00000381140 NDUFB8O95169 186 aa14.96□□□□□ -0.02
GTF3A-201ENST00000381140 MPC2O95563 127 aa14.96□□□□□ -0.02
GTF3A-201ENST00000381140 IFNA17P01571 189 aa14.96□□□□□ -0.02
GTF3A-201ENST00000381140 IGHV3-23P01764 117 aa14.96□□□□□ -0.02
GTF3A-201ENST00000381140 HSPE1P61604 102 aaKnown RBP14.96□□□□□ -0.02
GTF3A-201ENST00000381140 HSD17B13Q7Z5P4 300 aaPredicted RBP14.96□□□□□ -0.02
GTF3A-201ENST00000381140 RCC1LQ96I51 464 aaKnown RBP14.96□□□□□ -0.02
GTF3A-201ENST00000381140 FANCD2OSQ96PS1 177 aa14.96□□□□□ -0.02
GTF3A-201ENST00000381140 CACNG5Q9UF02 275 aa14.96□□□□□ -0.02
GTF3A-201ENST00000381140 TRBV12-3P01733 135 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 PET100P0DJ07 73 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 SLC25A4P12235 298 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 HIST1H1BP16401 226 aaKnown RBP14.95□□□□□ -0.02
GTF3A-201ENST00000381140 PRCDQ00LT1 54 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 RAB32Q13637 225 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 SAMD5Q5TGI4 173 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 C11orf87Q6NUJ2 197 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 SLC25A24Q6NUK1 477 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 ZNF343Q6P1L6 599 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 Q6ZRM9 215 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 OR11H4Q8NGC9 324 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 DCUN1D4Q92564 292 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 PLEKHA3Q9HB20 300 aa14.95□□□□□ -0.02
GTF3A-201ENST00000381140 IGLV11-55A0A075B6I3 123 aa14.94□□□□□ -0.02
GTF3A-201ENST00000381140 LYL1P12980 280 aa14.94□□□□□ -0.02
GTF3A-201ENST00000381140 LRRC37A5PQ49AS3 106 aa14.94□□□□□ -0.02
GTF3A-201ENST00000381140 PEF1Q9UBV8 284 aaKnown RBP14.94□□□□□ -0.02
GTF3A-201ENST00000381140 FAM90A26D6RGX4 464 aa14.93□□□□□ -0.02
GTF3A-201ENST00000381140 CYB5BO43169 146 aa14.93□□□□□ -0.02
GTF3A-201ENST00000381140 NXPH3O95157 252 aa14.93□□□□□ -0.02
GTF3A-201ENST00000381140 MBPP02686 304 aaPredicted RBP14.93□□□□□ -0.02
GTF3A-201ENST00000381140 NKX2-1P43699 371 aaPredicted RBP14.93□□□□□ -0.02
GTF3A-201ENST00000381140 ID3Q02535 119 aa14.93□□□□□ -0.02
GTF3A-201ENST00000381140 AARDQ4LEZ3 155 aa14.93□□□□□ -0.02
GTF3A-201ENST00000381140 PRSS54Q6PEW0 395 aa14.93□□□□□ -0.02
GTF3A-201ENST00000381140 ZNF429Q86V71 674 aa14.93□□□□□ -0.02
GTF3A-201ENST00000381140 OR1S1Q8NH92 325 aa14.93□□□□□ -0.02
GTF3A-201ENST00000381140 THAP6Q8TBB0 222 aa14.93□□□□□ -0.02
GTF3A-201ENST00000381140 DLX4Q92988 240 aaPredicted RBP14.93□□□□□ -0.02
GTF3A-201ENST00000381140 MCRIP2Q9BUT9 160 aaKnown RBP14.93□□□□□ -0.02
GTF3A-201ENST00000381140 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.93□□□□□ -0.02
GTF3A-201ENST00000381140 DMRT1Q9Y5R6 373 aa14.93□□□□□ -0.02
GTF3A-201ENST00000381140 HMSDA8MTL9 139 aa14.92□□□□□ -0.02
GTF3A-201ENST00000381140 K7EPK0 472 aa14.92□□□□□ -0.02
GTF3A-201ENST00000381140 OVOL1O14753 267 aa14.92□□□□□ -0.02
GTF3A-201ENST00000381140 HOXD3P31249 432 aaPredicted RBP14.92□□□□□ -0.02
GTF3A-201ENST00000381140 HOXA1P49639 335 aaPredicted RBP14.92□□□□□ -0.02
GTF3A-201ENST00000381140 S100A10P60903 97 aa14.92□□□□□ -0.02
GTF3A-201ENST00000381140 DEFA6Q01524 100 aa14.92□□□□□ -0.02
GTF3A-201ENST00000381140 RNF126Q9BV68 326 aa14.92□□□□□ -0.02
GTF3A-201ENST00000381140 ENY2Q9NPA8 101 aa14.92□□□□□ -0.02
GTF3A-201ENST00000381140 MBD2Q9UBB5 411 aa14.92□□□□□ -0.02
GTF3A-201ENST00000381140 F11RQ9Y624 299 aaKnown RBP14.92□□□□□ -0.02
GTF3A-201ENST00000381140 IGHV3-21A0A0B4J1V1 117 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 MFSD2BA6NFX1 497 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 SEC14L6B5MCN3 397 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 H0YIZ8 118 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 DEDDO75618 318 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 SCGB1D2O95969 90 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 ZP3P21754 424 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 NKX2-5P52952 324 aaPredicted RBP14.91□□□□□ -0.02
GTF3A-201ENST00000381140 MFAP2P55001 183 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 ERHP84090 104 aaKnown RBP14.91□□□□□ -0.02
GTF3A-201ENST00000381140 BEAN1Q3B7T3 259 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 CLEC19AQ6UXS0 136 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 OR2C3Q8N628 320 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 EEF1AKMT3Q96AZ1 226 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 THYN1Q9P016 225 aa14.91□□□□□ -0.02
GTF3A-201ENST00000381140 FXYD6-FXYD2A0A087WZ82 144 aa14.9□□□□□ -0.02
GTF3A-201ENST00000381140 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP14.9□□□□□ -0.02
GTF3A-201ENST00000381140 PPP5D1E7EU14 171 aa14.9□□□□□ -0.02
GTF3A-201ENST00000381140 RLN2P04090 185 aa14.9□□□□□ -0.02
GTF3A-201ENST00000381140 RPEL1Q2QD12 228 aa14.9□□□□□ -0.02
GTF3A-201ENST00000381140 MISP3Q96FF7 219 aa14.9□□□□□ -0.02
GTF3A-201ENST00000381140 CACFD1Q9UGQ2 172 aa14.9□□□□□ -0.02
GTF3A-201ENST00000381140 RCL1Q9Y2P8 373 aaKnown RBP14.9□□□□□ -0.02
GTF3A-201ENST00000381140 LSM5Q9Y4Y9 91 aaKnown RBP14.9□□□□□ -0.02
GTF3A-201ENST00000381140 PRB2P02812 416 aaPredicted RBP14.89□□□□□ -0.03
GTF3A-201ENST00000381140 C9orf62Q8N4C0 152 aa14.89□□□□□ -0.03
GTF3A-201ENST00000381140 CXorf58Q96LI9 332 aa14.89□□□□□ -0.03
GTF3A-201ENST00000381140 CCDC140Q96MF4 163 aa14.89□□□□□ -0.03
GTF3A-201ENST00000381140 GPR61Q9BZJ8 451 aa14.89□□□□□ -0.03
GTF3A-201ENST00000381140 C11orf1Q9H5F2 150 aa14.89□□□□□ -0.03
GTF3A-201ENST00000381140 ZC4H2Q9NQZ6 224 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms