RNA–Protein interactions for RNA: ENST00000378839.1

CCDC3-202, Transcript of coiled-coil domain containing 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC3, Length 3,180 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC3-202ENST00000378839 POLEQ07864 2286 aa10.82□□□□□ -0.68
CCDC3-202ENST00000378839 A0A1W2PPQ1 181 aa10.82□□□□□ -0.68
CCDC3-202ENST00000378839 VENTXO95231 258 aa10.82□□□□□ -0.68
CCDC3-202ENST00000378839 TMEM37Q8WXS4 190 aa10.82□□□□□ -0.68
CCDC3-202ENST00000378839 K7EN84 100 aa10.82□□□□□ -0.68
CCDC3-202ENST00000378839 IGHV3-48P01763 117 aa10.82□□□□□ -0.68
CCDC3-202ENST00000378839 WT1-ASQ06250 92 aa10.82□□□□□ -0.68
CCDC3-202ENST00000378839 TMEM30BQ3MIR4 351 aa10.82□□□□□ -0.68
CCDC3-202ENST00000378839 TMEM177Q53S58 311 aa10.82□□□□□ -0.68
CCDC3-202ENST00000378839 C2orf83Q53S99 150 aa10.82□□□□□ -0.68
CCDC3-202ENST00000378839 ZNF596Q8TC21 504 aa10.82□□□□□ -0.68
CCDC3-202ENST00000378839 NDUFB3O43676 98 aa10.81□□□□□ -0.68
CCDC3-202ENST00000378839 ZNF705AQ6ZN79 300 aaPredicted RBP10.81□□□□□ -0.68
CCDC3-202ENST00000378839 OCC1Q8TAD7 63 aa10.81□□□□□ -0.68
CCDC3-202ENST00000378839 MRPL36Q9P0J6 103 aaKnown RBP10.81□□□□□ -0.68
CCDC3-202ENST00000378839 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.81□□□□□ -0.68
CCDC3-202ENST00000378839 GGCTO75223 188 aaKnown RBP10.81□□□□□ -0.68
CCDC3-202ENST00000378839 OR10J1P30954 320 aa10.81□□□□□ -0.68
CCDC3-202ENST00000378839 FAM78BQ5VT40 261 aa10.81□□□□□ -0.68
CCDC3-202ENST00000378839 OSR1Q8TAX0 266 aaPredicted RBP10.81□□□□□ -0.68
CCDC3-202ENST00000378839 HRNRQ86YZ3 2850 aaPredicted RBP10.81□□□□□ -0.68
CCDC3-202ENST00000378839 IGHV3-72A0A0B4J1Y9 119 aa10.81□□□□□ -0.68
CCDC3-202ENST00000378839 PLXNB1O43157 2135 aa10.81□□□□□ -0.68
CCDC3-202ENST00000378839 LGALS4P56470 323 aa10.81□□□□□ -0.68
CCDC3-202ENST00000378839 HLA-DRB5Q30154 266 aa10.81□□□□□ -0.68
CCDC3-202ENST00000378839 TMEM155Q4W5P6 130 aa10.81□□□□□ -0.68
CCDC3-202ENST00000378839 TMEM144Q7Z5S9 345 aa10.81□□□□□ -0.68
CCDC3-202ENST00000378839 MRPL41Q8IXM3 137 aaKnown RBP10.81□□□□□ -0.68
CCDC3-202ENST00000378839 ANAPC16Q96DE5 110 aa10.81□□□□□ -0.68
CCDC3-202ENST00000378839 FNDC4Q9H6D8 234 aaPredicted RBP10.81□□□□□ -0.68
CCDC3-202ENST00000378839 NAV3Q8IVL0 2385 aa10.81□□□□□ -0.68
CCDC3-202ENST00000378839 A0A1B0GUS0 222 aa10.8□□□□□ -0.68
CCDC3-202ENST00000378839 SCGB1D1O95968 90 aa10.8□□□□□ -0.68
CCDC3-202ENST00000378839 NPSP0C0P6 89 aa10.8□□□□□ -0.68
CCDC3-202ENST00000378839 RHOBP62745 196 aa10.8□□□□□ -0.68
CCDC3-202ENST00000378839 C19orf35Q6ZS72 473 aa10.8□□□□□ -0.68
CCDC3-202ENST00000378839 OR10X1Q8NGY0 326 aa10.8□□□□□ -0.68
CCDC3-202ENST00000378839 OR5B3Q8NH48 314 aa10.8□□□□□ -0.68
CCDC3-202ENST00000378839 FLYWCH2Q96CP2 140 aaKnown RBP10.8□□□□□ -0.68
CCDC3-202ENST00000378839 RPL8P62917 257 aaKnown RBP10.8□□□□□ -0.68
CCDC3-202ENST00000378839 LRRC10Q5BKY1 277 aa10.8□□□□□ -0.68
CCDC3-202ENST00000378839 ZNF430Q9H8G1 570 aaPredicted RBP10.8□□□□□ -0.68
CCDC3-202ENST00000378839 DYNLRB1Q9NP97 96 aa10.8□□□□□ -0.68
CCDC3-202ENST00000378839 PSMB11A5LHX3 300 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 FNDC10F2Z333 226 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 F6UZH7 168 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 IGHV1-8P0DP01 117 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 OR1L8Q8NGR8 309 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 TRAV5A0A0B4J249 113 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 IGHV1-69-2A0A0G2JMI3 117 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 IL3RAP26951 378 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 CNTFRP26992 372 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 CD69Q07108 199 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 OR2T10Q8NGZ9 312 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 KAAG1Q9UBP8 84 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 IGF2RP11717 2491 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 APOA2P02652 100 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 REG1AP05451 166 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 NUTF2P61970 127 aaKnown RBP10.79□□□□□ -0.68
CCDC3-202ENST00000378839 ACTL10Q5JWF8 245 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 LINC00311Q8N616 119 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 TMEM167AQ8TBQ9 72 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 SFRP2Q96HF1 295 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 OR5B12Q96R08 314 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 VKORC1Q9BQB6 163 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 SNHG12Q9BXW3 62 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 FUT9Q9Y231 359 aa10.79□□□□□ -0.68
CCDC3-202ENST00000378839 ZNF705FA8MVS1 300 aaPredicted RBP10.78□□□□□ -0.68
CCDC3-202ENST00000378839 ZNF705DP0CH99 300 aaPredicted RBP10.78□□□□□ -0.68
CCDC3-202ENST00000378839 ZNF705BP0CI00 300 aaPredicted RBP10.78□□□□□ -0.68
CCDC3-202ENST00000378839 GZMBP10144 247 aa10.78□□□□□ -0.68
CCDC3-202ENST00000378839 ZNF841Q6ZN19 808 aa10.78□□□□□ -0.68
CCDC3-202ENST00000378839 FRMD6-AS1P0C7T7 363 aa10.78□□□□□ -0.68
CCDC3-202ENST00000378839 SRP14P37108 136 aaKnown RBP10.78□□□□□ -0.68
CCDC3-202ENST00000378839 ZNF137PP52743 207 aa10.78□□□□□ -0.68
CCDC3-202ENST00000378839 PSG5Q15238 335 aa10.78□□□□□ -0.68
CCDC3-202ENST00000378839 OR4C13Q8NGP0 309 aa10.78□□□□□ -0.68
CCDC3-202ENST00000378839 NEU1Q99519 415 aa10.78□□□□□ -0.68
CCDC3-202ENST00000378839 IGKV1D-37A0A075B6S9 117 aa10.77□□□□□ -0.68
CCDC3-202ENST00000378839 FAM90A27PA6NNH2 459 aa10.77□□□□□ -0.68
CCDC3-202ENST00000378839 PPP5D1E7EU14 171 aa10.77□□□□□ -0.68
CCDC3-202ENST00000378839 SLC25A17O43808 307 aa10.77□□□□□ -0.68
CCDC3-202ENST00000378839 TYMSP04818 313 aa10.77□□□□□ -0.68
CCDC3-202ENST00000378839 OR10J4P0C629 311 aa10.77□□□□□ -0.68
CCDC3-202ENST00000378839 APOBEC3AP31941 199 aaPredicted RBP10.77□□□□□ -0.68
CCDC3-202ENST00000378839 TFPI2P48307 235 aa10.77□□□□□ -0.68
CCDC3-202ENST00000378839 RPL15P61313 204 aaKnown RBP10.77□□□□□ -0.68
CCDC3-202ENST00000378839 COMMD5Q9GZQ3 224 aa10.77□□□□□ -0.68
CCDC3-202ENST00000378839 FKBP11Q9NYL4 201 aa10.77□□□□□ -0.68
CCDC3-202ENST00000378839 ELOA3CA0A087WX78 387 aaPredicted RBP10.77□□□□□ -0.69
CCDC3-202ENST00000378839 XKRY2A2RUG3 117 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 LY6HO94772 140 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 AMBPP02760 352 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 MFAP2P55001 183 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 ZNF90Q03938 601 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 RAB31Q13636 194 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 C8orf31Q8N9H6 132 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 IGFBPL1Q8WX77 278 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 C11orf52Q96A22 123 aa10.77□□□□□ -0.69
CCDC3-202ENST00000378839 TMEM186Q96B77 213 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms