RNA–Protein interactions for RNA: ENST00000377808.8

SMARCE1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-203ENST00000377808 RBPMS2Q6ZRY4 209 aaKnown RBP8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 SCGB3A2Q96PL1 93 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 CHRDL1Q9BU40 450 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 ZNF436Q9C0F3 470 aaPredicted RBP8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 TMEM222Q9H0R3 208 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 MLXQ9UH92 298 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 GPR132Q9UNW8 380 aa8.74□□□□□ -1.01
SMARCE1-203ENST00000377808 ZNF785A8K8V0 405 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 NUPL2O15504 423 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 GNG7O60262 68 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 NXPH3O95157 252 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 CD7P09564 240 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 P0C879 139 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 AKR1C4P17516 323 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 SUB1P53999 127 aaKnown RBP eCLIP8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 MFAP4P55083 255 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 AP3S2P59780 193 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 RELQ04864 619 aaPredicted RBP8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 SLC16A13Q7RTY0 426 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 TMED4Q7Z7H5 227 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 TMEM61Q8N0U2 210 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 TOMM5Q8N4H5 51 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 DEFB125Q8N687 156 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 ZNF114Q8NC26 417 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 LHFPL5Q8TAF8 219 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 TMEM190Q8WZ59 177 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 RBPMSQ93062 196 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 MARC2Q969Z3 335 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 SOSTQ9BQB4 213 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 WFDC10AQ9H1F0 79 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 GAR1Q9NY12 217 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 PRR13Q9NZ81 148 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 CACNG5Q9UF02 275 aa8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 HUWE1Q7Z6Z7 4374 aaKnown RBP8.73□□□□□ -1.01
SMARCE1-203ENST00000377808 F8W735 103 aaPredicted RBP8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 I3L2K1 104 aa8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 NDUFA4O00483 81 aa8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 CDS2O95674 445 aa8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 INPP1P49441 399 aa8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 FAM219AQ8IW50 185 aa8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 SELENOHQ8IZQ5 122 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 OR52B4Q8NGK2 314 aa8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 GLYATL2Q8WU03 294 aa8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 RBM38Q9H0Z9 239 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 SRD5A3Q9H8P0 318 aa8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 DAZ1Q9NQZ3 744 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 C19orf73Q9NVV2 129 aa8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 MRPL27Q9P0M9 148 aaKnown RBP8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 KCNIP3Q9Y2W7 256 aa8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 V9GYH0 126 aa8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 COL7A1Q02388 2944 aa8.72□□□□□ -1.01
SMARCE1-203ENST00000377808 CEBPZOSA8MTT3 80 aa8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 A8MZ25 164 aa8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 OR11H12B2RN74 326 aa8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 ANXA3P12429 323 aa8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 ADMP35318 185 aa8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 OPRK1P41145 380 aa8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 ELLP55199 621 aaPredicted RBP8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 KLF9Q13886 244 aaPredicted RBP8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 SPANXN2Q5MJ10 180 aa8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 Q6ZRM9 215 aa8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 DUSP18Q8NEJ0 188 aa8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 GPR146Q96CH1 333 aa8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 ATP6V0BQ99437 205 aa8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.71□□□□□ -1.02
SMARCE1-203ENST00000377808 IGHV3-49A0A0A0MS15 119 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 CORTO00230 105 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 RNASE2P10153 161 aaKnown RBP8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 NPBWR1P48145 328 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 SPCS3P61009 180 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 TMEM187Q14656 261 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 ZNF79Q15937 498 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 HAGHQ16775 308 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 ANKRD55Q3KP44 614 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 LAMTOR1Q6IAA8 161 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 TRIM63Q969Q1 353 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 TMEM230Q96A57 120 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 TXN2Q99757 166 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 SPATA25Q9BR10 227 aa8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 HEYLQ9NQ87 328 aaPredicted RBP8.7□□□□□ -1.02
SMARCE1-203ENST00000377808 ZNF701M0R085 212 aaPredicted RBP8.69□□□□□ -1.02
SMARCE1-203ENST00000377808 CTSGP08311 255 aa8.69□□□□□ -1.02
SMARCE1-203ENST00000377808 C8orf88P0DMB2 117 aa8.69□□□□□ -1.02
SMARCE1-203ENST00000377808 SULT1A3P0DMM9 295 aa8.69□□□□□ -1.02
SMARCE1-203ENST00000377808 SULT1A4P0DMN0 295 aa8.69□□□□□ -1.02
SMARCE1-203ENST00000377808 CCDC190Q86UF4 302 aa8.69□□□□□ -1.02
SMARCE1-203ENST00000377808 TM2D3Q9BRN9 247 aa8.69□□□□□ -1.02
SMARCE1-203ENST00000377808 RETNQ9HD89 108 aa8.69□□□□□ -1.02
SMARCE1-203ENST00000377808 UBQLN2Q9UHD9 624 aa8.69□□□□□ -1.02
SMARCE1-203ENST00000377808 TMEM56-RWDD3S4R434 201 aa8.69□□□□□ -1.02
SMARCE1-203ENST00000377808 IGKV3-7A0A075B6H7 116 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 IGHV3OR16-13A0A075B7E8 117 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 IGHV3-74A0A0B4J1X5 117 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 TRAV25A0A0B4J276 109 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 C15orf62A8K5M9 175 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 INS-IGF2F8WCM5 200 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 SCGB2A1O75556 95 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 VAMP1P23763 118 aa8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 FCGR2BP31994 310 aaPredicted RBP8.68□□□□□ -1.02
SMARCE1-203ENST00000377808 HTR2BP41595 481 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms