RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 CMC4P56277 68 aaPredicted RBP9.08□□□□□ -0.96
HIF3A-205ENST00000377670 C2orf83Q53S99 150 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 ZNF818PQ6ZRF7 136 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 NIT1Q86X76 327 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 SPSB4Q96A44 273 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 TBL2Q9Y4P3 447 aaKnown RBP9.08□□□□□ -0.96
HIF3A-205ENST00000377670 WNK2Q9Y3S1 2297 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 TNFRSF9Q07011 255 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 NR2C2APQ86WQ0 139 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 MAP1LC3AQ9H492 121 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 PCNX2A6NKB5 2137 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 EFNA2O43921 213 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 CELA3BP08861 270 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 SRSF3P84103 164 aaKnown RBP9.08□□□□□ -0.96
HIF3A-205ENST00000377670 ZCCHC24Q8N2G6 241 aaKnown RBP9.08□□□□□ -0.96
HIF3A-205ENST00000377670 FAM110DQ8TAY7 271 aaPredicted RBP9.08□□□□□ -0.96
HIF3A-205ENST00000377670 PHLDA3Q9Y5J5 127 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 NDUFS8O00217 210 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 FAM159AQ6UWV7 190 aa9.08□□□□□ -0.96
HIF3A-205ENST00000377670 IGHV3-49A0A0A0MS15 119 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 CLEC19AQ6UXS0 136 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 SAXO1Q8IYX7 474 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 SRSF12Q8WXF0 261 aaKnown RBP9.07□□□□□ -0.96
HIF3A-205ENST00000377670 OR5P3Q8WZ94 311 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A10PA6NDY2 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A18PA6NE21 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A16PA6NEW6 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A20PA6NIJ5 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A8PA6NJQ4 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A7PA6NKC0 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A22PA8MWA6 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A12PA8MX19 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A5PA8MXJ8 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A23PA8MXZ1 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A15PP0C7V4 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A13PP0C7W8 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A14PP0C7W9 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A24PP0C7X0 464 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 DLX6P56179 175 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 PRR30Q53SZ7 412 aaPredicted RBP9.07□□□□□ -0.96
HIF3A-205ENST00000377670 ACP7Q6ZNF0 438 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 SOX21Q9Y651 276 aaPredicted RBP9.07□□□□□ -0.96
HIF3A-205ENST00000377670 A6NNC1 897 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 C10orf128Q5T292 105 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 VOPP1Q96AW1 172 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 TMEM70Q9BUB7 260 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 ZNF430Q9H8G1 570 aaPredicted RBP9.07□□□□□ -0.96
HIF3A-205ENST00000377670 PLXND1Q9Y4D7 1925 aa9.07□□□□□ -0.96
HIF3A-205ENST00000377670 H3BTX0 84 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 PSCAO43653 123 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 TSPAN13O95857 204 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 FOXG1P55316 489 aaPredicted RBP9.06□□□□□ -0.96
HIF3A-205ENST00000377670 FOXF2Q12947 444 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 CENPWQ5EE01 88 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 KLK15Q9H2R5 256 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 CADP27708 2225 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 TRAV14DV4A0A0A6YYC5 116 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 TIMM23O14925 209 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 IL4P05112 153 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 SRP19P09132 144 aaKnown RBP9.06□□□□□ -0.96
HIF3A-205ENST00000377670 SAMD13Q5VXD3 122 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 BEX4Q9NWD9 120 aaPredicted RBP9.06□□□□□ -0.96
HIF3A-205ENST00000377670 HEATR5AQ86XA9 2040 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 IGHV3-66A0A0C4DH42 116 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 SLC17A3O00476 420 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 C17orf82Q86X59 251 aaPredicted RBP9.06□□□□□ -0.96
HIF3A-205ENST00000377670 MAPK1IP1LQ8NDC0 245 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 OR4D5Q8NGN0 318 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 RNF222A6NCQ9 220 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 NPFFO15130 113 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 LGALS3P17931 250 aaKnown RBP9.06□□□□□ -0.96
HIF3A-205ENST00000377670 GPR183P32249 361 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 FOXA3P55318 350 aaPredicted RBP9.06□□□□□ -0.96
HIF3A-205ENST00000377670 KIAA2026Q5HYC2 2103 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 CEACAM4O75871 244 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 ZNF124Q15973 351 aa9.06□□□□□ -0.96
HIF3A-205ENST00000377670 HEATR1Q9H583 2144 aaKnown RBP9.06□□□□□ -0.96
HIF3A-205ENST00000377670 GALNT14Q96FL9 552 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 SMIM8Q96KF7 97 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 KCNS1Q96KK3 526 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 RPRMQ9NS64 109 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 DOPEY2Q9Y3R5 2298 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 IGHMP01871 453 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 C8orf88P0DMB2 117 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 CX3CL1P78423 397 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 ZNF56Q15929 161 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 PRSS8Q16651 343 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 FAM74A4Q5TZK3 123 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 DRAM1Q8N682 238 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 RCC1LQ96I51 464 aaKnown RBP9.05□□□□□ -0.96
HIF3A-205ENST00000377670 FAM90A26D6RGX4 464 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 RBFOX2O43251 390 aaKnown RBP eCLIP9.05□□□□□ -0.96
HIF3A-205ENST00000377670 RNASE1P07998 156 aaKnown RBP9.05□□□□□ -0.96
HIF3A-205ENST00000377670 DTX2Q86UW9 622 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 Q96M66 194 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 LINC00312Q9Y6C7 94 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 IGHV1-18A0A0C4DH31 117 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 TFF1P04155 84 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 PRSS2P07478 247 aa9.05□□□□□ -0.96
HIF3A-205ENST00000377670 GCHFRP30047 84 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms