RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 TRAV25A0A0B4J276 109 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 APOA2P02652 100 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 EGR1P18146 543 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 GNG3P63215 75 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 DAZAP2Q15038 168 aaPredicted RBP12.84□□□□□ -0.35
FXN-201ENST00000377270 TMEM97Q5BJF2 176 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 MDS2Q8NDY4 140 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 SFXN3Q9BWM7 321 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 DOCK7Q96N67 2140 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 A0A0G2JRQ6 117 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 PLP2Q04941 152 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 ZDHHC23Q8IYP9 409 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 C18orf32Q8TCD1 76 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 TAF15Q92804 592 aaKnown RBP eCLIP12.84□□□□□ -0.35
FXN-201ENST00000377270 PSENENQ9NZ42 101 aa12.84□□□□□ -0.35
FXN-201ENST00000377270 KMT2EQ8IZD2 1858 aa12.83□□□□□ -0.35
FXN-201ENST00000377270 NKX2-8O15522 239 aa12.83□□□□□ -0.36
FXN-201ENST00000377270 ACSM6Q6P461 480 aa12.83□□□□□ -0.36
FXN-201ENST00000377270 ZNF439Q8NDP4 499 aa12.83□□□□□ -0.36
FXN-201ENST00000377270 DAZAP1Q96EP5 407 aaKnown RBP12.83□□□□□ -0.36
FXN-201ENST00000377270 HS3ST6Q96QI5 342 aa12.83□□□□□ -0.36
FXN-201ENST00000377270 OR4C12Q96R67 309 aa12.83□□□□□ -0.36
FXN-201ENST00000377270 SLC25A22Q9H936 323 aa12.83□□□□□ -0.36
FXN-201ENST00000377270 SCRT2Q9NQ03 307 aa12.83□□□□□ -0.36
FXN-201ENST00000377270 NAT8BQ9UHF3 227 aa12.83□□□□□ -0.36
FXN-201ENST00000377270 KBTBD11-OT1A0A1B0GTJ5 212 aa12.83□□□□□ -0.36
FXN-201ENST00000377270 CTXND1A0A1B0GTU2 59 aa12.83□□□□□ -0.36
FXN-201ENST00000377270 H0Y980 276 aa12.83□□□□□ -0.36
FXN-201ENST00000377270 SRIP30626 198 aa12.83□□□□□ -0.36
FXN-201ENST00000377270 A6NDN8 102 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 PCNX2A6NKB5 2137 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 NPIPB5A8MRT5 1133 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 PAGE4O60829 102 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 IAPPP10997 89 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 KIR3DS1Q14943 382 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 DDB2Q92466 427 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 ZNF835Q9Y2P0 537 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 SYNGR2O43760 224 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 KIR3DL3Q8N743 410 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 IL36RNQ9UBH0 155 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 CYSLTR1Q9Y271 337 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 TIMM9Q9Y5J7 89 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 HILPDAQ9Y5L2 63 aa12.82□□□□□ -0.36
FXN-201ENST00000377270 IGKV1D-13A0A0B4J2D9 117 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 C2orf70A6NJV1 201 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 TMPRSS2O15393 492 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 TGFAP01135 160 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 IGKV1-13P0DP09 117 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 PSG2P11465 335 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 FABP2P12104 132 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 SPINK2P20155 84 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 UBE2L5PA0A1B0GUS4 154 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 CD300LBA8K4G0 201 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 HSPB6O14558 160 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 SCGB2A1O75556 95 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 MT-ATP8P03928 68 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 FGF12P61328 243 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 GRAMD2BQ96HH9 432 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 GCM1Q9NP62 436 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 CCL28Q9NRJ3 127 aa12.81□□□□□ -0.36
FXN-201ENST00000377270 C11orf94C9JXX5 98 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 M0R2Z0 102 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 F2RP25116 425 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 C2orf91Q6ZV80 131 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 OR10G8Q8NGN5 311 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 GNB1LQ9BYB4 327 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 ZNF257Q9Y2Q1 563 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 PRRC2CQ9Y520 2896 aaKnown RBP12.8□□□□□ -0.36
FXN-201ENST00000377270 TRAV9-1A0A075B6T8 112 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 TRGV5A0A0B4J1U4 118 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A10PA6NDY2 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A18PA6NE21 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A16PA6NEW6 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A20PA6NIJ5 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A8PA6NJQ4 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A7PA6NKC0 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A22PA8MWA6 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A12PA8MX19 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A5PA8MXJ8 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A23PA8MXZ1 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 SS18L1O75177 396 aaPredicted RBP12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A15PP0C7V4 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A13PP0C7W8 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A14PP0C7W9 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 FAM90A24PP0C7X0 464 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 LGALS4P56470 323 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 ZNF766Q5HY98 468 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 MKXQ8IYA7 352 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 TPRX1Q8N7U7 411 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 IL36BQ9NZH7 164 aa12.8□□□□□ -0.36
FXN-201ENST00000377270 TRBV9A0A0B4J1U6 114 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 SYNGR1O43759 233 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 PGLYRP1O75594 196 aaPredicted RBP12.79□□□□□ -0.36
FXN-201ENST00000377270 WFDC2Q14508 124 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 TRIP6Q15654 476 aaKnown RBP12.79□□□□□ -0.36
FXN-201ENST00000377270 IZUMO4Q1ZYL8 232 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 GCSAMLQ5JQS6 135 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 ACP7Q6ZNF0 438 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 Q6ZRM9 215 aa12.79□□□□□ -0.36
FXN-201ENST00000377270 OR10G9Q8NGN4 311 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms