RNA–Protein interactions for RNA: ENST00000376659.9

TRIM39-202, Transcript of tripartite motif containing 39, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM39, Length 3,535 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-202ENST00000376659 FAM3BP58499 235 aaPredicted RBP7.75□□□□□ -1.17
TRIM39-202ENST00000376659 PAX2Q02962 417 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 PRR30Q53SZ7 412 aaPredicted RBP7.75□□□□□ -1.17
TRIM39-202ENST00000376659 NUDT10Q8NFP7 164 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 OR5R1Q8NH85 324 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 RITA1Q96K30 269 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 TMEM238C9JI98 176 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 NDUFB4O95168 129 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 RPLP1P05386 114 aaKnown RBP7.75□□□□□ -1.17
TRIM39-202ENST00000376659 OR4A8P0C604 315 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 OR10J4P0C629 311 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 YPEL3P61236 119 aaPredicted RBP7.75□□□□□ -1.17
TRIM39-202ENST00000376659 TEPPQ6URK8 271 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 ZNF841Q6ZN19 808 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 TTC28Q96AY4 2481 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 ABHD17AQ96GS6 310 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 NABP2Q9BQ15 211 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 C7orf69Q9H7B7 122 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 PRNDQ9UKY0 176 aa7.75□□□□□ -1.17
TRIM39-202ENST00000376659 CCL3L1P16619 93 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 MYCNOSP40205 109 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 CDKN1BP46527 198 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 LYG1Q8N1E2 194 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 ZCCHC24Q8N2G6 241 aaKnown RBP7.74□□□□□ -1.17
TRIM39-202ENST00000376659 ZNF664Q8N3J9 261 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 THAP8Q8NA92 274 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 TMEM37Q8WXS4 190 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 SFRP2Q96HF1 295 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 PITPNC1Q9UKF7 332 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 GGTLC3B5MD39 225 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 M0QZK8 103 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 OVOL3O00110 214 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 BMP5P22003 454 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 SELENOTP62341 195 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 WT1-ASQ06250 92 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 BATFQ16520 125 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 TMEM155Q4W5P6 130 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 TEX38Q6PEX7 206 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 MIR17HGQ75NE6 70 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 CISD2Q8N5K1 135 aaKnown RBP7.74□□□□□ -1.17
TRIM39-202ENST00000376659 OR10W1Q8NGF6 305 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 TMEM167AQ8TBQ9 72 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 SLC35E1Q96K37 410 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 ZNF714Q96N38 554 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 CBLN4Q9NTU7 201 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 MRPL36Q9P0J6 103 aaKnown RBP7.74□□□□□ -1.17
TRIM39-202ENST00000376659 V9GYV3 84 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 E7EQL1 145 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 MFAP2P55001 183 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 ERVK-16P61578 105 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 OR5I1Q13606 314 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 TMEM108Q6UXF1 575 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 OR1P1Q8NH06 330 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 OR5B3Q8NH48 314 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 OSR1Q8TAX0 266 aaPredicted RBP7.74□□□□□ -1.17
TRIM39-202ENST00000376659 SSMEM1Q8WWF3 244 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 FNDC4Q9H6D8 234 aaPredicted RBP7.74□□□□□ -1.17
TRIM39-202ENST00000376659 FUT9Q9Y231 359 aa7.74□□□□□ -1.17
TRIM39-202ENST00000376659 CRYGCP07315 174 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 GZMBP10144 247 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 ESDP10768 282 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 ATP5IP56385 69 aaPredicted RBP7.73□□□□□ -1.17
TRIM39-202ENST00000376659 OR4A5Q8NH83 315 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 OCC1Q8TAD7 63 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 ACY3Q96HD9 319 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 HEYLQ9NQ87 328 aaPredicted RBP7.73□□□□□ -1.17
TRIM39-202ENST00000376659 CADP27708 2225 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 CCL8P80075 99 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 TBR1Q16650 682 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 MLANAQ16655 118 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 NECAP1Q8NC96 275 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 WFIKKN1Q96NZ8 548 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 RAB9BQ9NP90 201 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 TPSG1Q9NRR2 321 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 C16orf97H3BN30 126 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 UBE2G2P60604 165 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 CD69Q07108 199 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 PATE2Q6UY27 113 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 DNAJC4Q9NNZ3 241 aa7.73□□□□□ -1.17
TRIM39-202ENST00000376659 ASH1LQ9NR48 2969 aaKnown RBP7.72□□□□□ -1.17
TRIM39-202ENST00000376659 J3QR06 171 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 KLK10O43240 276 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 ZNF709Q8N972 641 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 NUDT11Q96G61 164 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 PLCE1Q9P212 2302 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 ICE1Q9Y2F5 2266 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 hADV38S2A0JD32 116 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 LY6LH3BQJ8 138 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 H7BYZ3 331 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 NDUFS8O00217 210 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 NUPR1O60356 82 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 IGLV1-47P01700 117 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 FRMD6-AS1P0C7T7 363 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 LGALS4P56470 323 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 JOSD1Q15040 202 aaPredicted RBP7.72□□□□□ -1.17
TRIM39-202ENST00000376659 OR5T1Q8NG75 326 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 PACRGQ96M98 296 aaPredicted RBP7.72□□□□□ -1.17
TRIM39-202ENST00000376659 TMEM204Q9BSN7 226 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 SLC35D1Q9NTN3 355 aa7.72□□□□□ -1.17
TRIM39-202ENST00000376659 IGLC7A0M8Q6 106 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms