RNA–Protein interactions for RNA: ENST00000375427.4

SCN2A-202, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN2A, Length 8,553 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-202ENST00000375427 ZIC1Q15915 447 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 SERP2Q8N6R1 65 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 SARAFQ96BY9 339 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 FRG2CA6NGY1 282 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 TM4SF1P30408 202 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 RPL31P62899 125 aaKnown RBP5.06□□□□□ -1.6
SCN2A-202ENST00000375427 C9orf47Q6ZRZ4 202 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 DEFB119Q8N690 84 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 CCL17Q92583 94 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 SUSD3Q96L08 255 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 LINC01387J3KSC0 135 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 CFHR1Q03591 330 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 DEFB110Q30KQ9 67 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 BVES-AS1Q5T3Y7 98 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 LAT2Q9GZY6 243 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 VCYO14598 125 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 EFEMP2O95967 443 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 COA6Q5JTJ3 125 aaKnown RBP5.06□□□□□ -1.6
SCN2A-202ENST00000375427 RIF1Q5UIP0 2472 aaKnown RBP5.06□□□□□ -1.6
SCN2A-202ENST00000375427 CDC42EP5Q6NZY7 148 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 MARCH3Q86UD3 253 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 SPEM1Q8N4L4 309 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 SIGLEC12Q96PQ1 595 aa5.06□□□□□ -1.6
SCN2A-202ENST00000375427 PF4P02776 101 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 TRBV24-1A0A075B6N3 115 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 A0A0B4J2C4 111 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 TRGV4A0A0C4DH28 118 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 RPL8P62917 257 aaKnown RBP5.05□□□□□ -1.6
SCN2A-202ENST00000375427 EMC6Q9BV81 110 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 A0A1W2PP55 124 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 K7EP34 96 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 EREGO14944 169 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 TCL1BO95988 128 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 IER5LQ5T953 404 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 ZNF826PQ6ZT77 177 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 CYS1Q717R9 158 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 C16orf52Q8NHV5 167 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 DUOX1Q9NRD9 1551 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 TINCRA0A1B0GVN0 87 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 CA11O75493 328 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 TMEM219Q86XT9 240 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 TMEM99Q8N816 258 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 INSM2Q96T92 566 aaPredicted RBP5.05□□□□□ -1.6
SCN2A-202ENST00000375427 PLA2G3Q9NZ20 509 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 IDI2-AS1Q9NZ38 188 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 LIPT2A6NK58 231 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 TARM1B6A8C7 271 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 DANCRP0C864 163 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 FXYD7P58549 80 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 ISCA2Q86U28 154 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 RNF183Q96D59 192 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 PLAC1Q9HBJ0 212 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 SCRT2Q9NQ03 307 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 IGKV1D-42A0A075B6H8 117 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 IGHV1OR21-1A0A087WYE8 117 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 F5H768 121 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 UQCRQO14949 82 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 C4orf48Q5BLP8 95 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 GLIS3Q8NEA6 775 aa5.05□□□□□ -1.6
SCN2A-202ENST00000375427 LILRA5A6NI73 299 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 SCRG1O75711 98 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 CXCL3P19876 107 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 RNASE4P34096 147 aaKnown RBP5.04□□□□□ -1.6
SCN2A-202ENST00000375427 FAM174AQ8TBP5 190 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 PDLIM5Q96HC4 596 aaKnown RBP5.04□□□□□ -1.6
SCN2A-202ENST00000375427 RHNO1Q9BSD3 238 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 SRXN1Q9BYN0 137 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 NEXMIFQ5QGS0 1516 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 PDLIM4P50479 330 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 NREPQ16612 68 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 OTOSQ8NHW6 89 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 BICRAQ9NZM4 1560 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 PTPRDP23468 1912 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 MAP3K4Q9Y6R4 1608 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 A0A1W2PPM0 123 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 CELA3AP09093 270 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 CD69Q07108 199 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 TRAV14DV4A0A0A6YYC5 116 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 ZNF561-AS1K7EIQ3 104 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 RND3P61587 244 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 HIGD2BQ4VC39 106 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 PRR30Q53SZ7 412 aaPredicted RBP5.04□□□□□ -1.6
SCN2A-202ENST00000375427 GFI1BQ5VTD9 330 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 ZCCHC24Q8N2G6 241 aaKnown RBP5.04□□□□□ -1.6
SCN2A-202ENST00000375427 ZNF524Q96C55 264 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 VSIG2Q96IQ7 327 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 FGF20Q9NP95 211 aaPredicted RBP5.04□□□□□ -1.6
SCN2A-202ENST00000375427 PRO1854Q9UHT4 67 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 ABCC3O15438 1527 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 TRAV26-1A0A087WT03 109 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 CENPVL1A0A0U1RR11 272 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 A0A1W2PRE2 83 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 LINC01553A4QN01 128 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 FAM231BA6NCW3 169 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 NMBP08949 121 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 CD7P09564 240 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 CXorf67Q86X51 503 aaPredicted RBP5.04□□□□□ -1.6
SCN2A-202ENST00000375427 ZNF488Q96MN9 340 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 IGHV1-45A0A0A0MS14 117 aa5.04□□□□□ -1.6
SCN2A-202ENST00000375427 LOC105371267A0A1B0GV96 52 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms