RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 C15orf61A6NNL5 157 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 H3BVH4 76 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 LOXL3P58215 753 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 RELQ04864 619 aaPredicted RBP9.64□□□□□ -0.87
PTCH1-203ENST00000375274 SAPCD1Q5SSQ6 148 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 METTL26Q96S19 204 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 OSTCQ9NRP0 149 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 RALYQ9UKM9 306 aaKnown RBP9.64□□□□□ -0.87
PTCH1-203ENST00000375274 F11RQ9Y624 299 aaKnown RBP9.64□□□□□ -0.87
PTCH1-203ENST00000375274 IGKV3D-15A0A087WSY6 115 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 LOC107984156A0A0G2JMH3 177 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 C9JQL5 133 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 SNCGO76070 127 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 FAM27E3Q08E93 113 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 EFNB3Q15768 340 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 MST1LQ2TV78 715 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 GGNQ86UU5 652 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 ARL17AQ8IVW1 177 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 ST6GALNAC6Q969X2 333 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 SH2D7A6NKC9 451 aaPredicted RBP9.64□□□□□ -0.87
PTCH1-203ENST00000375274 HGFACQ04756 655 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 TMEM42Q69YG0 159 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 PMCHL2Q9BQD1 86 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 PEF1Q9UBV8 284 aaKnown RBP9.64□□□□□ -0.87
PTCH1-203ENST00000375274 IGHV1-69-2A0A0G2JMI3 117 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 A0A1W2PRE2 83 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 IGKV1-5P01602 117 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 C5orf24Q7Z6I8 188 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 PNKDQ8N490 385 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 RNASEH2CQ8TDP1 164 aaKnown RBP9.64□□□□□ -0.87
PTCH1-203ENST00000375274 MRPL20Q9BYC9 149 aaKnown RBP9.64□□□□□ -0.87
PTCH1-203ENST00000375274 CLDN16Q9Y5I7 305 aa9.64□□□□□ -0.87
PTCH1-203ENST00000375274 SAA2-SAA4A0A096LPE2 208 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 TFF1P04155 84 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 OR9G9P0C7N8 305 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 SAA2P0DJI9 122 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-203ENST00000375274 CX3CL1P78423 397 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 DOCK11Q5JSL3 2073 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 OR10J6PQ8NGY7 276 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 ZNF414Q96IQ9 312 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 HIST1H4GQ99525 98 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 FBXL15Q9H469 300 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 RPP21Q9H633 154 aaKnown RBP9.63□□□□□ -0.87
PTCH1-203ENST00000375274 ZNF581Q9P0T4 197 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 NPIPB11E5RHQ5 1161 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 UPK2O00526 184 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 ZNF883P0CG24 379 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 SAA1P0DJI8 122 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-203ENST00000375274 SOX21Q9Y651 276 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-203ENST00000375274 A1L4Q6 167 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 C7orf71A4D174 169 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 PINLYPA6NC86 204 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 SP9P0CG40 484 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 ZFP36L1Q07352 338 aaKnown RBP9.63□□□□□ -0.87
PTCH1-203ENST00000375274 DNLZQ5SXM8 178 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.63□□□□□ -0.871e-6■■■■□ 23.7
PTCH1-203ENST00000375274 ZNF324O75467 553 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-203ENST00000375274 APOHP02749 345 aaPredicted RBP9.63□□□□□ -0.87
PTCH1-203ENST00000375274 GFRA1P56159 465 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 TREML4Q6UXN2 200 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 TMEM14EPQ6UXP3 125 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 LINC01551Q86U37 167 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 RNF115Q9Y4L5 304 aa9.63□□□□□ -0.87
PTCH1-203ENST00000375274 STAG3L3P0CL85 134 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 PRR7Q8TB68 274 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 PRDM6Q9NQX0 595 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 LINC00312Q9Y6C7 94 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 TIMP3P35625 211 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 MEF2CQ06413 473 aaPredicted RBP9.62□□□□□ -0.87
PTCH1-203ENST00000375274 FOXF2Q12947 444 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 C9orf106Q8NAJ2 232 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 PHLDA3Q9Y5J5 127 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 SNAI2O43623 268 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 PSPNO60542 156 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 RAB9AP51151 201 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 GGTLC1Q9BX51 225 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 KLK15Q9H2R5 256 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 DOCK9Q9BZ29 2069 aa9.62□□□□□ -0.87
PTCH1-203ENST00000375274 ID1P41134 155 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 ERASQ7Z444 233 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 PRELID3AQ96N28 172 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 TRBV20OR9-2A0A075B6H5 130 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 CCL3L1P16619 93 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 CD69Q07108 199 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 FOXL1Q12952 345 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 C18orf15Q96N68 181 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 SSBP4Q9BWG4 385 aaPredicted RBP9.61□□□□□ -0.87
PTCH1-203ENST00000375274 GNB1LQ9BYB4 327 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 A0A1W2PS18 150 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 C9orf172C9J069 976 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 PF4V1P10720 104 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 TM4SF20Q53R12 229 aa9.61□□□□□ -0.87
PTCH1-203ENST00000375274 FOXI3A8MTJ6 420 aaPredicted RBP9.6□□□□□ -0.87
PTCH1-203ENST00000375274 TEX45Q8NA69 505 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 FMC1Q96HJ9 113 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 PYYP10082 97 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 Q9H3A6 140 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 IGHV3OR16-13A0A075B7E8 117 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 IGHV3-74A0A0B4J1X5 117 aa9.6□□□□□ -0.87
PTCH1-203ENST00000375274 FAM90A9PA6NNJ1 464 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms