RNA–Protein interactions for RNA: ENST00000375224.1

UBR4-202, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-202ENST00000375224 TMEM242Q9NWH2 141 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 RPUSD1Q9UJJ7 312 aaKnown RBP6.75□□□□□ -1.33
UBR4-202ENST00000375224 B9A039 149 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 K7EQM0 130 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 HRASP01112 189 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 HSPB1P04792 205 aaKnown RBP6.75□□□□□ -1.33
UBR4-202ENST00000375224 PDLIM4P50479 330 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 EFNB3Q15768 340 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 FBXL19-AS1Q494R0 122 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 ZNF506Q5JVG8 444 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 SP5Q6BEB4 398 aaPredicted RBP6.75□□□□□ -1.33
UBR4-202ENST00000375224 ZNF439Q8NDP4 499 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 DDB2Q92466 427 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 PLPPR2Q96GM1 343 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 GTSF1LQ9H1H1 148 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 HIF1ANQ9NWT6 349 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 CDC42EP3Q9UKI2 254 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 RFNGQ9Y644 331 aa6.75□□□□□ -1.33
UBR4-202ENST00000375224 A0A0U1RQK1 487 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 UBE2L5PA0A1B0GUS4 154 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 C17orf112F2Z3M2 114 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 PDE6DO43924 150 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 SAP30O75446 220 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 CNIH1O95406 144 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 IFNA1P01562 189 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 OR9G9P0C7N8 305 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 ESDP10768 282 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 CD99P14209 185 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 RND2P52198 227 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 HERV-K104P63124 156 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 PAFAH1B2P68402 229 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 CLEC12BQ2HXU8 276 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 LRRC10Q5BKY1 277 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 QTRT1Q9BXR0 403 aaKnown RBP6.74□□□□□ -1.33
UBR4-202ENST00000375224 RPRMQ9NS64 109 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 RAI1Q7Z5J4 1906 aaPredicted RBP6.74□□□□□ -1.33
UBR4-202ENST00000375224 AKAP13Q12802 2813 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 SAA2-SAA4A0A096LPE2 208 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 PMS2P5A8MQ11 134 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 SHISA9B4DS77 424 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 NDUFB3O43676 98 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 SAA2P0DJI9 122 aaPredicted RBP6.74□□□□□ -1.33
UBR4-202ENST00000375224 AZU1P20160 251 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 KRTDAPP60985 99 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 TMEM177Q53S58 311 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 SLC25A48Q6ZT89 311 aaKnown RBP6.74□□□□□ -1.33
UBR4-202ENST00000375224 RAXQ9Y2V3 346 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 LOC400499M0QZD8 3231 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 DIDO1Q9BTC0 2240 aaKnown RBP6.74□□□□□ -1.33
UBR4-202ENST00000375224 ICE1Q9Y2F5 2266 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 SPTBN2O15020 2390 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 ANKRD11Q6UB99 2663 aaPredicted RBP6.74□□□□□ -1.33
UBR4-202ENST00000375224 SRP19P09132 144 aaKnown RBP6.74□□□□□ -1.33
UBR4-202ENST00000375224 RPL31P62899 125 aaKnown RBP6.74□□□□□ -1.33
UBR4-202ENST00000375224 RTL8BQ17RB0 113 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 C5orf64Q2M2E5 130 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 VWC2Q2TAL6 325 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 WDR25Q64LD2 544 aaPredicted RBP6.74□□□□□ -1.33
UBR4-202ENST00000375224 AMMECR1LQ6DCA0 310 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 ZNF787Q6DD87 383 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 OR10G4Q8NGN3 311 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 ZDHHC16Q969W1 377 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 HSPB9Q9BQS6 159 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 TMEM140Q9NV12 185 aa6.74□□□□□ -1.33
UBR4-202ENST00000375224 ZFHX4Q86UP3 3567 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 E7EQL1 145 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 CD33P20138 364 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 LINC00205P59089 165 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 CCL20P78556 96 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 RELBQ01201 579 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 PSG3Q16557 428 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 POU2AF1Q16633 256 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 DUX4L9Q6RFH8 374 aaPredicted RBP6.73□□□□□ -1.33
UBR4-202ENST00000375224 TCF23Q7RTU1 214 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 TGIF2LYQ8IUE0 185 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 OR5AU1Q8NGC0 362 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 OR4P4Q8NGL7 312 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 CLDND2Q8NHS1 167 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 CCL17Q92583 94 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 ZNF714Q96N38 554 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 SPXQ9BT56 116 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 HEYLQ9NQ87 328 aaPredicted RBP6.73□□□□□ -1.33
UBR4-202ENST00000375224 IGHV3-7P01780 117 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 CRYGCP07315 174 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 PLP1P60201 277 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 RHOGP84095 191 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 ADIRFQ15847 76 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 IMMP2LQ96T52 175 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 ENY2Q9NPA8 101 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 SLC39A9Q9NUM3 307 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 KAAG1Q9UBP8 84 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 PTPRQQ9UMZ3 2332 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 HCFC1P51610 2035 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 IGHV1-69-2A0A0G2JMI3 117 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 MPDU1O75352 247 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 GALR1P47211 349 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 FER1L6-AS1Q8NA97 138 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 LEAP2Q969E1 77 aa6.73□□□□□ -1.33
UBR4-202ENST00000375224 CISD1Q9NZ45 108 aaKnown RBP6.73□□□□□ -1.33
UBR4-202ENST00000375224 LOC102723971A0A1B0GUV8 181 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms