RNA–Protein interactions for RNA: ENST00000374843.8

HLA-DMA-201, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DMA, Length 1,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-201ENST00000374843 C9orf152Q5JTZ5 239 aa13.53□□□□□ -0.24
HLA-DMA-201ENST00000374843 OR8G2PQ6IF36 304 aa13.53□□□□□ -0.24
HLA-DMA-201ENST00000374843 Q6ZS46 218 aa13.53□□□□□ -0.24
HLA-DMA-201ENST00000374843 TMEM217Q8N7C4 229 aa13.53□□□□□ -0.24
HLA-DMA-201ENST00000374843 JMJD8Q96S16 334 aa13.53□□□□□ -0.24
HLA-DMA-201ENST00000374843 ATP5SQ99766 215 aa13.53□□□□□ -0.24
HLA-DMA-201ENST00000374843 PRSS22Q9GZN4 317 aa13.53□□□□□ -0.24
HLA-DMA-201ENST00000374843 WFDC1Q9HC57 220 aa13.53□□□□□ -0.24
HLA-DMA-201ENST00000374843 PAIP2BQ9ULR5 123 aaKnown RBP13.53□□□□□ -0.24
HLA-DMA-201ENST00000374843 FN1P02751 2386 aaKnown RBP13.52□□□□□ -0.24
HLA-DMA-201ENST00000374843 IGLV11-55A0A075B6I3 123 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 TRAV41A0A0B4J266 112 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 TRIM77I1YAP6 450 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 TSPAN9O75954 239 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 DFFBO76075 338 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 BRI3O95415 125 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 UBA52P62987 128 aaKnown RBP13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 CFHR3Q02985 330 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 EXOSC2Q13868 293 aaKnown RBP13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 ATP6V1FQ16864 119 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 ECSCRQ19T08 205 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 UNQ5815/PRO19632Q6UWF5 114 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 C19orf35Q6ZS72 473 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 STOML3Q8TAV4 291 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 DUX5Q96PT3 197 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 TMEM147Q9BVK8 224 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 SMIM3Q9BZL3 60 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 WNT10AQ9GZT5 417 aa13.52□□□□□ -0.25
HLA-DMA-201ENST00000374843 GPX4P36969 197 aaPredicted RBP13.51□□□□□ -0.25
HLA-DMA-201ENST00000374843 CD69Q07108 199 aa13.51□□□□□ -0.25
HLA-DMA-201ENST00000374843 ZNF266Q14584 549 aa13.51□□□□□ -0.25
HLA-DMA-201ENST00000374843 CLINT1Q14677 625 aa13.51□□□□□ -0.25
HLA-DMA-201ENST00000374843 SLC51BQ86UW2 128 aa13.51□□□□□ -0.25
HLA-DMA-201ENST00000374843 LILRB2Q8N423 598 aa13.51□□□□□ -0.25
HLA-DMA-201ENST00000374843 UBAC2Q8NBM4 344 aa13.51□□□□□ -0.25
HLA-DMA-201ENST00000374843 CACNG8Q8WXS5 425 aa13.51□□□□□ -0.25
HLA-DMA-201ENST00000374843 FANCD2OSQ96PS1 177 aa13.51□□□□□ -0.25
HLA-DMA-201ENST00000374843 PARD6GQ9BYG4 376 aaPredicted RBP13.51□□□□□ -0.25
HLA-DMA-201ENST00000374843 G3V318 75 aa13.5□□□□□ -0.25
HLA-DMA-201ENST00000374843 H3BUA1 57 aa13.5□□□□□ -0.25
HLA-DMA-201ENST00000374843 CYB5BO43169 146 aa13.5□□□□□ -0.25
HLA-DMA-201ENST00000374843 SLC16A13Q7RTY0 426 aa13.5□□□□□ -0.25
HLA-DMA-201ENST00000374843 ARV1Q9H2C2 271 aa13.5□□□□□ -0.25
HLA-DMA-201ENST00000374843 UQCC1Q9NVA1 299 aa13.5□□□□□ -0.25
HLA-DMA-201ENST00000374843 MAST4O15021 2626 aa13.5□□□□□ -0.25
HLA-DMA-201ENST00000374843 FAM181BA6NEQ2 426 aa13.49□□□□□ -0.25
HLA-DMA-201ENST00000374843 SOX15O60248 233 aa13.49□□□□□ -0.25
HLA-DMA-201ENST00000374843 JTBO76095 146 aa13.49□□□□□ -0.25
HLA-DMA-201ENST00000374843 DEFA4P12838 97 aa13.49□□□□□ -0.25
HLA-DMA-201ENST00000374843 HIST1H1BP16401 226 aaKnown RBP13.49□□□□□ -0.25
HLA-DMA-201ENST00000374843 MDKP21741 143 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMA-201ENST00000374843 PPIFP30405 207 aaKnown RBP13.49□□□□□ -0.25
HLA-DMA-201ENST00000374843 ARSJQ5FYB0 599 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMA-201ENST00000374843 RPL7L1Q6DKI1 246 aaKnown RBP13.49□□□□□ -0.25
HLA-DMA-201ENST00000374843 ZNF471Q9BX82 626 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMA-201ENST00000374843 FNDC4Q9H6D8 234 aaPredicted RBP13.49□□□□□ -0.25
HLA-DMA-201ENST00000374843 BORCS7-ASMTA0A0B4J1R7 106 aa13.48□□□□□ -0.25
HLA-DMA-201ENST00000374843 TRBV9A0A0B4J1U6 114 aa13.48□□□□□ -0.25
HLA-DMA-201ENST00000374843 RPS10-NUDT3A0A1W2PQS6 291 aa13.48□□□□□ -0.25
HLA-DMA-201ENST00000374843 I3L2K1 104 aa13.48□□□□□ -0.25
HLA-DMA-201ENST00000374843 K7EIM0 57 aa13.48□□□□□ -0.25
HLA-DMA-201ENST00000374843 EIF5AP63241 154 aaKnown RBP13.48□□□□□ -0.25
HLA-DMA-201ENST00000374843 TMEM95Q3KNT9 176 aa13.48□□□□□ -0.25
HLA-DMA-201ENST00000374843 OR5T1Q8NG75 326 aa13.48□□□□□ -0.25
HLA-DMA-201ENST00000374843 NOL4LQ96MY1 436 aaPredicted RBP13.48□□□□□ -0.25
HLA-DMA-201ENST00000374843 GON7Q9BXV9 100 aa13.48□□□□□ -0.25
HLA-DMA-201ENST00000374843 UBE2L5PA0A1B0GUS4 154 aa13.47□□□□□ -0.25
HLA-DMA-201ENST00000374843 IGLV1-40P01703 118 aa13.47□□□□□ -0.25
HLA-DMA-201ENST00000374843 TPT1P13693 172 aaKnown RBP13.47□□□□□ -0.25
HLA-DMA-201ENST00000374843 OPRK1P41145 380 aa13.47□□□□□ -0.25
HLA-DMA-201ENST00000374843 ETFRF1Q6IPR1 90 aa13.47□□□□□ -0.25
HLA-DMA-201ENST00000374843 SLC25A24Q6NUK1 477 aa13.47□□□□□ -0.25
HLA-DMA-201ENST00000374843 Q6ZSV7 163 aa13.47□□□□□ -0.25
HLA-DMA-201ENST00000374843 ST8SIA2Q92186 375 aa13.47□□□□□ -0.25
HLA-DMA-201ENST00000374843 MISP3Q96FF7 219 aa13.47□□□□□ -0.25
HLA-DMA-201ENST00000374843 WDR83OSQ9Y284 106 aa13.47□□□□□ -0.25
HLA-DMA-201ENST00000374843 LSM4Q9Y4Z0 139 aaKnown RBP13.47□□□□□ -0.25
HLA-DMA-201ENST00000374843 TMEM89A2RUT3 159 aa13.46□□□□□ -0.25
HLA-DMA-201ENST00000374843 TCF21O43680 179 aa13.46□□□□□ -0.25
HLA-DMA-201ENST00000374843 MT-CO2P00403 227 aa13.46□□□□□ -0.25
HLA-DMA-201ENST00000374843 IFNA5P01569 189 aa13.46□□□□□ -0.25
HLA-DMA-201ENST00000374843 PRH1P02810 166 aa13.46□□□□□ -0.25
HLA-DMA-201ENST00000374843 SLC35E1Q96K37 410 aa13.46□□□□□ -0.25
HLA-DMA-201ENST00000374843 GINS3Q9BRX5 216 aa13.46□□□□□ -0.25
HLA-DMA-201ENST00000374843 WDR61Q9GZS3 305 aaKnown RBP13.46□□□□□ -0.25
HLA-DMA-201ENST00000374843 SERTAD4Q9NUC0 356 aa13.46□□□□□ -0.25
HLA-DMA-201ENST00000374843 THYN1Q9P016 225 aa13.46□□□□□ -0.25
HLA-DMA-201ENST00000374843 LINC00527Q9UJ94 153 aa13.46□□□□□ -0.25
HLA-DMA-201ENST00000374843 MPDU1O75352 247 aa13.45□□□□□ -0.26
HLA-DMA-201ENST00000374843 NDUFA7O95182 113 aa13.45□□□□□ -0.26
HLA-DMA-201ENST00000374843 IGHG4P01861 327 aa13.45□□□□□ -0.26
HLA-DMA-201ENST00000374843 GAMTQ14353 236 aa13.45□□□□□ -0.26
HLA-DMA-201ENST00000374843 TREML4Q6UXN2 200 aa13.45□□□□□ -0.26
HLA-DMA-201ENST00000374843 TMEM144Q7Z5S9 345 aa13.45□□□□□ -0.26
HLA-DMA-201ENST00000374843 BAP18Q8IXM2 172 aa13.45□□□□□ -0.26
HLA-DMA-201ENST00000374843 NECAP1Q8NC96 275 aa13.45□□□□□ -0.26
HLA-DMA-201ENST00000374843 TMEM116Q8NCL8 245 aa13.45□□□□□ -0.26
HLA-DMA-201ENST00000374843 PHYHIPLQ96FC7 376 aa13.45□□□□□ -0.26
HLA-DMA-201ENST00000374843 C16orf95Q9H693 158 aa13.45□□□□□ -0.26
HLA-DMA-201ENST00000374843 SLA2Q9H6Q3 261 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms