RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 FLYWCH2Q96CP2 140 aaKnown RBP13.86□□□□□ -0.19
RXRB-201ENST00000374680 ADTRPQ96IZ2 230 aa13.86□□□□□ -0.19
RXRB-201ENST00000374680 DMRT1Q9Y5R6 373 aa13.86□□□□□ -0.19
RXRB-201ENST00000374680 NDUFB3O43676 98 aa13.85□□□□□ -0.19
RXRB-201ENST00000374680 APOA2P02652 100 aa13.85□□□□□ -0.19
RXRB-201ENST00000374680 MGST1P10620 155 aaKnown RBP13.85□□□□□ -0.19
RXRB-201ENST00000374680 TMPRSS3P57727 454 aa13.85□□□□□ -0.19
RXRB-201ENST00000374680 RNASE7Q9H1E1 156 aaKnown RBP13.85□□□□□ -0.19
RXRB-201ENST00000374680 RAB9BQ9NP90 201 aa13.85□□□□□ -0.19
RXRB-201ENST00000374680 TMEM106BQ9NUM4 274 aa13.85□□□□□ -0.19
RXRB-201ENST00000374680 LINC00312Q9Y6C7 94 aa13.85□□□□□ -0.19
RXRB-201ENST00000374680 HIST1H1BP16401 226 aaKnown RBP13.85□□□□□ -0.19
RXRB-201ENST00000374680 TMEM178BH3BS89 294 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 GGCTO75223 188 aaKnown RBP13.84□□□□□ -0.19
RXRB-201ENST00000374680 RPL8P62917 257 aaKnown RBP13.84□□□□□ -0.19
RXRB-201ENST00000374680 TEX38Q6PEX7 206 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 NPIPB3Q92617 1050 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 GAL3ST2Q9H3Q3 398 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 SERTAD4Q9NUC0 356 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 SLC45A2Q9UMX9 530 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 H0YJW9 148 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 H3BTX0 84 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 NDUFS6O75380 124 aaKnown RBP13.84□□□□□ -0.19
RXRB-201ENST00000374680 PYYP10082 97 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 RNASE2P10153 161 aaKnown RBP13.84□□□□□ -0.19
RXRB-201ENST00000374680 RPL29P47914 159 aaKnown RBP13.84□□□□□ -0.19
RXRB-201ENST00000374680 CA1P00915 261 aaPredicted RBP13.84□□□□□ -0.19
RXRB-201ENST00000374680 CNTFRP26992 372 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 GRNP28799 593 aaKnown RBP13.84□□□□□ -0.19
RXRB-201ENST00000374680 PRR20EP86478 221 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 PRR20CP86479 221 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 PRR20DP86480 221 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 PRR20BP86481 221 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 PRR20AP86496 221 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 RUSC1-AS1Q66K80 236 aa13.84□□□□□ -0.19
RXRB-201ENST00000374680 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.84□□□□□ -0.19
RXRB-201ENST00000374680 MRPL36Q9P0J6 103 aaKnown RBP13.84□□□□□ -0.19
RXRB-201ENST00000374680 E7EQL1 145 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 SRP14P37108 136 aaKnown RBP13.83□□□□□ -0.2
RXRB-201ENST00000374680 CNN1P51911 297 aaKnown RBP13.83□□□□□ -0.2
RXRB-201ENST00000374680 DEFA6Q01524 100 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 KIAA1644Q3SXP7 199 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 ACTL10Q5JWF8 245 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 RNASE6Q93091 150 aaKnown RBP13.83□□□□□ -0.2
RXRB-201ENST00000374680 ZNF503Q96F45 646 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 RPH3ALQ9UNE2 315 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 HELTA6NFD8 242 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 FAM90A27PA6NNH2 459 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 OR5G3P0C626 314 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 IER3P46695 156 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 WT1-ASQ06250 92 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 LRRC10Q5BKY1 277 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 CENPWQ5EE01 88 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 TEX36Q5VZQ5 186 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 IGF2-ASQ6U949 168 aa13.83□□□□□ -0.2
RXRB-201ENST00000374680 TRAV34A0A0B4J273 112 aa13.82□□□□□ -0.2
RXRB-201ENST00000374680 TGOLN2O43493 480 aa13.82□□□□□ -0.2
RXRB-201ENST00000374680 GZMBP10144 247 aa13.82□□□□□ -0.2
RXRB-201ENST00000374680 ADMP35318 185 aa13.82□□□□□ -0.2
RXRB-201ENST00000374680 RAB4BP61018 213 aa13.82□□□□□ -0.2
RXRB-201ENST00000374680 TMEM144Q7Z5S9 345 aa13.82□□□□□ -0.2
RXRB-201ENST00000374680 OR8I2Q8N0Y5 310 aa13.82□□□□□ -0.2
RXRB-201ENST00000374680 GSX1Q9H4S2 264 aaPredicted RBP13.82□□□□□ -0.2
RXRB-201ENST00000374680 FNDC4Q9H6D8 234 aaPredicted RBP13.82□□□□□ -0.2
RXRB-201ENST00000374680 ZNF430Q9H8G1 570 aaPredicted RBP13.82□□□□□ -0.2
RXRB-201ENST00000374680 ELOVL5Q9NYP7 299 aa13.82□□□□□ -0.2
RXRB-201ENST00000374680 COX7A1P24310 79 aa13.82□□□□□ -0.2
RXRB-201ENST00000374680 TDGF1P3P51864 188 aa13.82□□□□□ -0.2
RXRB-201ENST00000374680 ERHP84090 104 aaKnown RBP13.82□□□□□ -0.2
RXRB-201ENST00000374680 GATCO43716 136 aaKnown RBP13.81□□□□□ -0.2
RXRB-201ENST00000374680 MOSP00540 346 aa13.81□□□□□ -0.2
RXRB-201ENST00000374680 NUP37Q8NFH4 326 aa13.81□□□□□ -0.2
RXRB-201ENST00000374680 MISP3Q96FF7 219 aa13.81□□□□□ -0.2
RXRB-201ENST00000374680 SCNM1Q9BWG6 230 aa13.81□□□□□ -0.2
RXRB-201ENST00000374680 ORM2P19652 201 aa13.81□□□□□ -0.2
RXRB-201ENST00000374680 GNG4P50150 75 aa13.81□□□□□ -0.2
RXRB-201ENST00000374680 ASCL5Q7RTU5 278 aa13.81□□□□□ -0.2
RXRB-201ENST00000374680 TGIF2LXQ8IUE1 241 aa13.81□□□□□ -0.2
RXRB-201ENST00000374680 SPACA3Q8IXA5 215 aa13.81□□□□□ -0.2
RXRB-201ENST00000374680 OR1L8Q8NGR8 309 aa13.81□□□□□ -0.2
RXRB-201ENST00000374680 SSBP3Q9BWW4 388 aaPredicted RBP13.81□□□□□ -0.2
RXRB-201ENST00000374680 A0A1W2PRD5 423 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 A0A1W2PRF3 423 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 A0A1W2PRM7 423 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 GGTLC3B5MD39 225 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 SCGB1D1O95968 90 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 MT-CO2P00403 227 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 CORO2AQ92828 525 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 EAF1Q96JC9 268 aaPredicted RBP13.8□□□□□ -0.2
RXRB-201ENST00000374680 F2Z2F3 143 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 ITGB1BP1O14713 200 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 CD69Q07108 199 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 BLNKQ8WV28 456 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 ZNF833PQ6ZTB9 187 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 OR5AU1Q8NGC0 362 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 SLC35E1Q96K37 410 aa13.8□□□□□ -0.2
RXRB-201ENST00000374680 TECRQ9NZ01 308 aaKnown RBP13.8□□□□□ -0.2
RXRB-201ENST00000374680 LOXP28300 417 aaPredicted RBP13.79□□□□□ -0.2
RXRB-201ENST00000374680 GPX4P36969 197 aaPredicted RBP13.79□□□□□ -0.2
RXRB-201ENST00000374680 RPL15P61313 204 aaKnown RBP13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms