RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 TTC9CQ8N5M4 171 aa13.74□□□□□ -0.21
PFDN6-201ENST00000374606 OR2T6Q8NHC8 308 aa13.74□□□□□ -0.21
PFDN6-201ENST00000374606 AQP10Q96PS8 301 aa13.74□□□□□ -0.21
PFDN6-201ENST00000374606 P2RX4Q99571 388 aa13.74□□□□□ -0.21
PFDN6-201ENST00000374606 MFFQ9GZY8 342 aa13.74□□□□□ -0.21
PFDN6-201ENST00000374606 LINC00527Q9UJ94 153 aa13.74□□□□□ -0.21
PFDN6-201ENST00000374606 F11RQ9Y624 299 aaKnown RBP13.74□□□□□ -0.21
PFDN6-201ENST00000374606 CMYA5Q8N3K9 4069 aa13.74□□□□□ -0.21
PFDN6-201ENST00000374606 RNF222A6NCQ9 220 aa13.73□□□□□ -0.21
PFDN6-201ENST00000374606 CYB5BO43169 146 aa13.73□□□□□ -0.21
PFDN6-201ENST00000374606 SCAF4O95104 1147 aaKnown RBP13.73□□□□□ -0.21
PFDN6-201ENST00000374606 IFNA4P05014 189 aa13.73□□□□□ -0.21
PFDN6-201ENST00000374606 CRYGCP07315 174 aa13.73□□□□□ -0.21
PFDN6-201ENST00000374606 EIF2B2P49770 351 aaKnown RBP13.73□□□□□ -0.21
PFDN6-201ENST00000374606 SULT1A1P50225 295 aa13.73□□□□□ -0.21
PFDN6-201ENST00000374606 BAXQ07812 192 aa13.73□□□□□ -0.21
PFDN6-201ENST00000374606 C19orf54Q5BKX5 351 aa13.73□□□□□ -0.21
PFDN6-201ENST00000374606 C19orf35Q6ZS72 473 aa13.73□□□□□ -0.21
PFDN6-201ENST00000374606 OR1L6Q8NGR2 347 aa13.73□□□□□ -0.21
PFDN6-201ENST00000374606 OR1P1Q8NH06 330 aa13.73□□□□□ -0.21
PFDN6-201ENST00000374606 NOL4LQ96MY1 436 aaPredicted RBP13.73□□□□□ -0.21
PFDN6-201ENST00000374606 CST7O76096 145 aa13.72□□□□□ -0.21
PFDN6-201ENST00000374606 AP2S1P53680 142 aaPredicted RBP13.72□□□□□ -0.21
PFDN6-201ENST00000374606 ETV3LQ6ZN32 361 aa13.72□□□□□ -0.21
PFDN6-201ENST00000374606 ACOT7LQ6ZUV0 252 aa13.72□□□□□ -0.21
PFDN6-201ENST00000374606 OR5T1Q8NG75 326 aa13.72□□□□□ -0.21
PFDN6-201ENST00000374606 TMEM170AQ8WVE7 144 aa13.72□□□□□ -0.21
PFDN6-201ENST00000374606 GON7Q9BXV9 100 aa13.72□□□□□ -0.21
PFDN6-201ENST00000374606 WNT10AQ9GZT5 417 aa13.72□□□□□ -0.21
PFDN6-201ENST00000374606 HSPB11Q9Y547 144 aa13.72□□□□□ -0.21
PFDN6-201ENST00000374606 CORTO00230 105 aa13.71□□□□□ -0.21
PFDN6-201ENST00000374606 TSPAN9O75954 239 aa13.71□□□□□ -0.21
PFDN6-201ENST00000374606 NKX2-5P52952 324 aaPredicted RBP13.71□□□□□ -0.21
PFDN6-201ENST00000374606 HBG1P69891 147 aa13.71□□□□□ -0.21
PFDN6-201ENST00000374606 HBG2P69892 147 aa13.71□□□□□ -0.21
PFDN6-201ENST00000374606 OR2F1Q13607 317 aa13.71□□□□□ -0.21
PFDN6-201ENST00000374606 ZNF345Q14585 488 aa13.71□□□□□ -0.21
PFDN6-201ENST00000374606 OR8G2PQ6IF36 304 aa13.71□□□□□ -0.21
PFDN6-201ENST00000374606 SLC25A24Q6NUK1 477 aa13.71□□□□□ -0.21
PFDN6-201ENST00000374606 OR10P1Q8NGE3 313 aa13.71□□□□□ -0.21
PFDN6-201ENST00000374606 MISP3Q96FF7 219 aa13.71□□□□□ -0.21
PFDN6-201ENST00000374606 CXCL2P19875 107 aa13.7□□□□□ -0.22
PFDN6-201ENST00000374606 MFAP2P55001 183 aa13.7□□□□□ -0.22
PFDN6-201ENST00000374606 SLC35B1P78383 322 aa13.7□□□□□ -0.22
PFDN6-201ENST00000374606 TMEM217Q8N7C4 229 aa13.7□□□□□ -0.22
PFDN6-201ENST00000374606 RNASEH2CQ8TDP1 164 aaKnown RBP13.7□□□□□ -0.22
PFDN6-201ENST00000374606 PINX1Q96BK5 328 aaKnown RBP13.7□□□□□ -0.22
PFDN6-201ENST00000374606 ZNF355PQ9NSJ1 428 aa13.7□□□□□ -0.22
PFDN6-201ENST00000374606 SERTAD4Q9NUC0 356 aa13.7□□□□□ -0.22
PFDN6-201ENST00000374606 VWFP04275 2813 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 NOTCH1P46531 2555 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 IGLV11-55A0A075B6I3 123 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 PMS2P5A8MQ11 134 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 H3BUA1 57 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 SOX15O60248 233 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 NDUFA7O95182 113 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 PRH1P02810 166 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 HIST1H1BP16401 226 aaKnown RBP13.69□□□□□ -0.22
PFDN6-201ENST00000374606 OPRK1P41145 380 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 NHLH2Q02577 135 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 CFHR3Q02985 330 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 SLC38A11Q08AI6 406 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 PVRIGQ6DKI7 326 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 HAPLN4Q86UW8 402 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 LILRB2Q8N423 598 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 C9orf62Q8N4C0 152 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 KCNRGQ8N5I3 272 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 OR1S2Q8NGQ3 325 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 TAF15Q92804 592 aaKnown RBP eCLIP13.69□□□□□ -0.22
PFDN6-201ENST00000374606 DMRT1Q9Y5R6 373 aa13.69□□□□□ -0.22
PFDN6-201ENST00000374606 A0A0D9SG52 128 aa13.68□□□□□ -0.22
PFDN6-201ENST00000374606 PSMB11A5LHX3 300 aa13.68□□□□□ -0.22
PFDN6-201ENST00000374606 PPIFP30405 207 aaKnown RBP13.68□□□□□ -0.22
PFDN6-201ENST00000374606 ARL16Q0P5N6 197 aa13.68□□□□□ -0.22
PFDN6-201ENST00000374606 EXOSC2Q13868 293 aaKnown RBP13.68□□□□□ -0.22
PFDN6-201ENST00000374606 OR5C1Q8NGR4 320 aa13.68□□□□□ -0.22
PFDN6-201ENST00000374606 SMIM3Q9BZL3 60 aa13.68□□□□□ -0.22
PFDN6-201ENST00000374606 C16orf95Q9H693 158 aa13.68□□□□□ -0.22
PFDN6-201ENST00000374606 THYN1Q9P016 225 aa13.68□□□□□ -0.22
PFDN6-201ENST00000374606 FBXL17Q9UF56 701 aa13.68□□□□□ -0.22
PFDN6-201ENST00000374606 RPS10-NUDT3A0A1W2PQS6 291 aa13.67□□□□□ -0.22
PFDN6-201ENST00000374606 PRSS46E5RG02 174 aa13.67□□□□□ -0.22
PFDN6-201ENST00000374606 OR2J3O76001 311 aa13.67□□□□□ -0.22
PFDN6-201ENST00000374606 S100A11P31949 105 aa13.67□□□□□ -0.22
PFDN6-201ENST00000374606 CD69Q07108 199 aa13.67□□□□□ -0.22
PFDN6-201ENST00000374606 CLINT1Q14677 625 aa13.67□□□□□ -0.22
PFDN6-201ENST00000374606 LGALSLQ3ZCW2 172 aaPredicted RBP13.67□□□□□ -0.22
PFDN6-201ENST00000374606 SLC16A13Q7RTY0 426 aa13.67□□□□□ -0.22
PFDN6-201ENST00000374606 OR4F5Q8NH21 305 aa13.67□□□□□ -0.22
PFDN6-201ENST00000374606 BSCL2Q96G97 398 aaPredicted RBP13.67□□□□□ -0.22
PFDN6-201ENST00000374606 FANCD2OSQ96PS1 177 aa13.67□□□□□ -0.22
PFDN6-201ENST00000374606 ARL6Q9H0F7 186 aa13.67□□□□□ -0.22
PFDN6-201ENST00000374606 KANTRA0A1W2PQU2 76 aa13.66□□□□□ -0.22
PFDN6-201ENST00000374606 IGLV1-40P01703 118 aa13.66□□□□□ -0.22
PFDN6-201ENST00000374606 TRGV3P03979 118 aa13.66□□□□□ -0.22
PFDN6-201ENST00000374606 PF4V1P10720 104 aa13.66□□□□□ -0.22
PFDN6-201ENST00000374606 DLK1P80370 383 aa13.66□□□□□ -0.22
PFDN6-201ENST00000374606 ETFRF1Q6IPR1 90 aa13.66□□□□□ -0.22
PFDN6-201ENST00000374606 TMUB2Q71RG4 321 aa13.66□□□□□ -0.22
PFDN6-201ENST00000374606 ZNF329Q86UD4 541 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms