RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 OR5AN1Q8NGI8 311 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 OR4P4Q8NGL7 312 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 TMEM18Q96B42 140 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 NABP2Q9BQ15 211 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 DERL1Q9BUN8 251 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 SEPSECSQ9HD40 501 aaKnown RBP11.35□□□□□ -0.59
HMGCL-203ENST00000374490 PPIAL4AQ9Y536 164 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 TRAPPC1Q9Y5R8 145 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 OR5G3P0C626 314 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 RPL19P84098 196 aaKnown RBP11.35□□□□□ -0.59
HMGCL-203ENST00000374490 CD69Q07108 199 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 LRRC10Q5BKY1 277 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 FAM209BQ5JX69 171 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 SPATA31B1PQ5VZV4 182 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 TEX38Q6PEX7 206 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 SGMS2Q8NHU3 365 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 ZNF596Q8TC21 504 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 TMEM37Q8WXS4 190 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 TMEM186Q96B77 213 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 HARBI1Q96MB7 349 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 MRPL20Q9BYC9 149 aaKnown RBP11.35□□□□□ -0.59
HMGCL-203ENST00000374490 COMMD5Q9GZQ3 224 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 PRDM13Q9H4Q3 707 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 SAP30LQ9HAJ7 183 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 NGBQ9NPG2 151 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 JKAMPQ9P055 326 aa11.35□□□□□ -0.59
HMGCL-203ENST00000374490 HEATR1Q9H583 2144 aaKnown RBP11.34□□□□□ -0.59
HMGCL-203ENST00000374490 PRRC2CQ9Y520 2896 aaKnown RBP11.34□□□□□ -0.59
HMGCL-203ENST00000374490 SPTBN1Q01082 2364 aaKnown RBP11.34□□□□□ -0.59
HMGCL-203ENST00000374490 TRBV20OR9-2A0A075B6H5 130 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 DPRXA6NFQ7 191 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 TSTD3H0UI37 97 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 H0YJW9 148 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 TMEM178BH3BS89 294 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 NDUFB3O43676 98 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 COL8A1P27658 744 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 CA7P43166 264 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 YPEL3P61236 119 aaPredicted RBP11.34□□□□□ -0.59
HMGCL-203ENST00000374490 RPL8P62917 257 aaKnown RBP11.34□□□□□ -0.59
HMGCL-203ENST00000374490 CCL8P80075 99 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 CLEC12BQ2HXU8 276 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 ZNF114Q8NC26 417 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 TMEM167AQ8TBQ9 72 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 FLYWCH2Q96CP2 140 aaKnown RBP11.34□□□□□ -0.59
HMGCL-203ENST00000374490 IL36BQ9NZH7 164 aa11.34□□□□□ -0.59
HMGCL-203ENST00000374490 SRRM4A7MD48 611 aaKnown RBP11.33□□□□□ -0.6
HMGCL-203ENST00000374490 IGKV1-16P04430 117 aa11.33□□□□□ -0.6
HMGCL-203ENST00000374490 OR10J1P30954 320 aa11.33□□□□□ -0.6
HMGCL-203ENST00000374490 SUB1P53999 127 aaKnown RBP eCLIP11.33□□□□□ -0.6
HMGCL-203ENST00000374490 DEFA6Q01524 100 aa11.33□□□□□ -0.6
HMGCL-203ENST00000374490 C22orf34Q6ZV56 151 aa11.33□□□□□ -0.6
HMGCL-203ENST00000374490 MIR17HGQ75NE6 70 aa11.33□□□□□ -0.6
HMGCL-203ENST00000374490 MRPL41Q8IXM3 137 aaKnown RBP11.33□□□□□ -0.6
HMGCL-203ENST00000374490 OCC1Q8TAD7 63 aa11.33□□□□□ -0.6
HMGCL-203ENST00000374490 NDUFA4L2Q9NRX3 87 aa11.33□□□□□ -0.6
HMGCL-203ENST00000374490 ICE1Q9Y2F5 2266 aa11.33□□□□□ -0.6
HMGCL-203ENST00000374490 MYOD1P15172 320 aa11.32□□□□□ -0.6
HMGCL-203ENST00000374490 BSPH1Q075Z2 132 aa11.32□□□□□ -0.6
HMGCL-203ENST00000374490 GAMTQ14353 236 aa11.32□□□□□ -0.6
HMGCL-203ENST00000374490 PSG5Q15238 335 aa11.32□□□□□ -0.6
HMGCL-203ENST00000374490 COX19Q49B96 90 aa11.32□□□□□ -0.6
HMGCL-203ENST00000374490 OR4C13Q8NGP0 309 aa11.32□□□□□ -0.6
HMGCL-203ENST00000374490 EAF1Q96JC9 268 aaPredicted RBP11.32□□□□□ -0.6
HMGCL-203ENST00000374490 TMEM106BQ9NUM4 274 aa11.32□□□□□ -0.6
HMGCL-203ENST00000374490 DCAF16Q9NXF7 216 aa11.32□□□□□ -0.6
HMGCL-203ENST00000374490 PRR14LQ5THK1 2151 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 TRBV9A0A0B4J1U6 114 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 A0A1W2PRE2 83 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 TNFRSF13BO14836 293 aaPredicted RBP11.31□□□□□ -0.6
HMGCL-203ENST00000374490 FOXH1O75593 365 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 OR10J4P0C629 311 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 C8orf88P0DMB2 117 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 ZNF137PP52743 207 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 ZNF90Q03938 601 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 HLA-DRB5Q30154 266 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 TMEM200BQ69YZ2 307 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 CDPF1Q6NVV7 123 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 OR10X1Q8NGY0 326 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 KAAG1Q9UBP8 84 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 WASHC3Q9Y3C0 194 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 UNC79Q9P2D8 2635 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 TEX15Q9BXT5 2789 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 A0A087X0M5 115 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 A0A1B0GX30 115 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 PGPEP1LA6NFU8 196 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 CCL21O00585 134 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 THBDP07204 575 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 MC5RP33032 325 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 VMA21Q3ZAQ7 101 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 GBGT1Q8N5D6 347 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 OR1L4Q8NGR5 311 aa11.31□□□□□ -0.6
HMGCL-203ENST00000374490 AURKAIP1Q9NWT8 199 aaPredicted RBP11.31□□□□□ -0.6
HMGCL-203ENST00000374490 NBPF19A0A087WUL8 3843 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 HCFC1P51610 2035 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 HELTA6NFD8 242 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 ACTL6BO94805 426 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 GZMBP10144 247 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 CCL3L1P16619 93 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 GNG4P50150 75 aa11.3□□□□□ -0.6
HMGCL-203ENST00000374490 SELENOTP62341 195 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms