RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 H1FXQ92522 213 aaKnown RBP10.63□□□□□ -0.71
PRPF4-201ENST00000374198 NAA38Q9BRA0 125 aaKnown RBP10.63□□□□□ -0.71
PRPF4-201ENST00000374198 MCRIP2Q9BUT9 160 aaKnown RBP10.63□□□□□ -0.71
PRPF4-201ENST00000374198 UNC13CQ8NB66 2214 aa10.62□□□□□ -0.71
PRPF4-201ENST00000374198 ACTL6BO94805 426 aa10.62□□□□□ -0.71
PRPF4-201ENST00000374198 TEPPQ6URK8 271 aa10.62□□□□□ -0.71
PRPF4-201ENST00000374198 SSX8Q7RTT4 187 aa10.62□□□□□ -0.71
PRPF4-201ENST00000374198 OR10W1Q8NGF6 305 aa10.62□□□□□ -0.71
PRPF4-201ENST00000374198 VSTM2AQ8TAG5 236 aa10.62□□□□□ -0.71
PRPF4-201ENST00000374198 GRAMD2BQ96HH9 432 aa10.62□□□□□ -0.71
PRPF4-201ENST00000374198 KIAA1549Q9HCM3 1950 aa10.62□□□□□ -0.71
PRPF4-201ENST00000374198 ESPL1Q14674 2120 aa10.62□□□□□ -0.71
PRPF4-201ENST00000374198 C10orf142B7Z368 130 aa10.62□□□□□ -0.71
PRPF4-201ENST00000374198 F2RL2O00254 374 aa10.62□□□□□ -0.71
PRPF4-201ENST00000374198 OR2H2O95918 312 aa10.62□□□□□ -0.71
PRPF4-201ENST00000374198 A0A0G2JMM0 328 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 A0A1W2PPB8 328 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 A0A1W2PRE2 83 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 PSMB11A5LHX3 300 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 KIR3DP1A8MWS1 328 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 OR5AL1P0C617 328 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 CCL2P13500 99 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 VDAC2P45880 294 aaPredicted RBP10.61□□□□□ -0.71
PRPF4-201ENST00000374198 HSD52Q0P140 79 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 FAM53AQ6NSI3 398 aaPredicted RBP10.61□□□□□ -0.71
PRPF4-201ENST00000374198 FAM231DQ6ZW35 169 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 THYN1Q9P016 225 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 DUSP13Q9UII6 198 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 ASCC3Q8N3C0 2202 aaKnown RBP10.61□□□□□ -0.71
PRPF4-201ENST00000374198 A0A1W2PR77 199 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 LIPFP07098 398 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 LINC00205P59089 165 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 RPL24P83731 157 aaKnown RBP10.61□□□□□ -0.71
PRPF4-201ENST00000374198 ABHD12Q8N2K0 398 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 SNRNP40Q96DI7 357 aaKnown RBP10.61□□□□□ -0.71
PRPF4-201ENST00000374198 FGF21Q9NSA1 209 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 SPCS1Q9Y6A9 102 aa10.61□□□□□ -0.71
PRPF4-201ENST00000374198 IGLV3-12A0A075B6K2 115 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 LINC00473A8K010 186 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 C22orf46C9J442 243 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 RAB9AP51151 201 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 FOXA3P55318 350 aaPredicted RBP10.6□□□□□ -0.71
PRPF4-201ENST00000374198 GNG3P63215 75 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 PRR20EP86478 221 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 PRR20CP86479 221 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 PRR20DP86480 221 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 PRR20BP86481 221 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 PRR20AP86496 221 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 KIR3DS1Q14943 382 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 ATP5L2Q7Z4Y8 100 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 C17orf82Q86X59 251 aaPredicted RBP10.6□□□□□ -0.71
PRPF4-201ENST00000374198 DEFB124Q8NES8 71 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 GALMQ96C23 342 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 ZNF503Q96F45 646 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 PERPQ96FX8 193 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 PLEKHA3Q9HB20 300 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 IDI2-AS1Q9NZ38 188 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 TEX48A0A1B0GUV7 120 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 A0A1B0GXF2 115 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 A0A1W2PPM0 123 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 ZNF716A6NP11 495 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 HIGD1CA8MV81 97 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 H0Y8G0 127 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 NXPH1P58417 271 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 CFHR1Q03591 330 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 MEF2CQ06413 473 aaPredicted RBP10.6□□□□□ -0.71
PRPF4-201ENST00000374198 PRR31Q5SQ13 230 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 LINC01545Q5VT33 79 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 TPRX1Q8N7U7 411 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 LRRC29Q8WV35 223 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 C5orf49A4QMS7 147 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 TM4SF5O14894 197 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 MYF5P13349 255 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 LIFP15018 202 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 DSCR4P56555 118 aaPredicted RBP10.6□□□□□ -0.71
PRPF4-201ENST00000374198 RAC3P60763 192 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 DEFB133Q30KQ1 61 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 DEFB126Q9BYW3 111 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 PKIBQ9C010 78 aa10.6□□□□□ -0.71
PRPF4-201ENST00000374198 CNOT1A5YKK6 2376 aaKnown RBP10.59□□□□□ -0.71
PRPF4-201ENST00000374198 DMXL1Q9Y485 3027 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 TMEM189A5PLL7 270 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 FABP6P51161 128 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 TRAT1Q6PIZ9 186 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 HSD17B10Q99714 261 aaKnown RBP10.59□□□□□ -0.71
PRPF4-201ENST00000374198 USF3Q68DE3 2245 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 SPTBN2O15020 2390 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 TNRC6AQ8NDV7 1962 aaKnown RBP10.59□□□□□ -0.71
PRPF4-201ENST00000374198 VWC2LB2RUY7 222 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 AGFG2O95081 481 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 CD59P13987 128 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 OR4A16Q8NH70 328 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 RABAC1Q9UI14 185 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 HSPB8Q9UJY1 196 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 HILPDAQ9Y5L2 63 aa10.59□□□□□ -0.71
PRPF4-201ENST00000374198 ANKRD30BLA7E2S9 258 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 FGF6P10767 208 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 IGFBP2P18065 325 aa10.58□□□□□ -0.72
PRPF4-201ENST00000374198 CD300EQ496F6 205 aaPredicted RBP10.58□□□□□ -0.72
PRPF4-201ENST00000374198 PRAMEF5Q5TYX0 476 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms