RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 SVBPQ8N300 66 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 RAB24Q969Q5 203 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 SRSF8Q9BRL6 282 aaKnown RBP12.51□□□□□ -0.41
HDAC8-209ENST00000373589 FNDC4Q9H6D8 234 aaPredicted RBP12.51□□□□□ -0.41
HDAC8-209ENST00000373589 SLC25A22Q9H936 323 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 CSMD2Q7Z408 3487 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 CENPEQ02224 2701 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 NPFFO15130 113 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 EIF3GO75821 320 aaKnown RBP eCLIP12.51□□□□□ -0.41
HDAC8-209ENST00000373589 COL8A1P27658 744 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 PRR20EP86478 221 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 PRR20CP86479 221 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 PRR20DP86480 221 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 PRR20BP86481 221 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 PRR20AP86496 221 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 HES1Q14469 280 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 ICAM4Q14773 271 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 HAGHQ16775 308 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 C5orf64Q2M2E5 130 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 FAM122CQ6P4D5 195 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 SSMEM1Q8WWF3 244 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 SLC35B3Q9H1N7 401 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 SLC45A2Q9UMX9 530 aa12.51□□□□□ -0.41
HDAC8-209ENST00000373589 LOC102723971A0A1B0GUV8 181 aa12.5□□□□□ -0.41
HDAC8-209ENST00000373589 MFAP2P55001 183 aa12.5□□□□□ -0.41
HDAC8-209ENST00000373589 B2MP61769 119 aa12.5□□□□□ -0.41
HDAC8-209ENST00000373589 CLEC12BQ2HXU8 276 aa12.5□□□□□ -0.41
HDAC8-209ENST00000373589 KHDC3LQ587J8 217 aa12.5□□□□□ -0.41
HDAC8-209ENST00000373589 STPG3Q8N7X2 389 aa12.5□□□□□ -0.41
HDAC8-209ENST00000373589 OR1P1Q8NH06 330 aa12.5□□□□□ -0.41
HDAC8-209ENST00000373589 OR2T6Q8NHC8 308 aa12.5□□□□□ -0.41
HDAC8-209ENST00000373589 GNG13Q9P2W3 67 aa12.5□□□□□ -0.41
HDAC8-209ENST00000373589 HSPB1P04792 205 aaKnown RBP12.49□□□□□ -0.41
HDAC8-209ENST00000373589 LINC00869P0C866 280 aa12.49□□□□□ -0.41
HDAC8-209ENST00000373589 DEFA4P12838 97 aa12.49□□□□□ -0.41
HDAC8-209ENST00000373589 SLC25A16P16260 332 aa12.49□□□□□ -0.41
HDAC8-209ENST00000373589 CDC34P49427 236 aaPredicted RBP12.49□□□□□ -0.41
HDAC8-209ENST00000373589 SLC35E1Q96K37 410 aa12.49□□□□□ -0.41
HDAC8-209ENST00000373589 MAP1AP78559 2803 aaPredicted RBP12.49□□□□□ -0.41
HDAC8-209ENST00000373589 HMGB3O15347 200 aaKnown RBP12.48□□□□□ -0.41
HDAC8-209ENST00000373589 CRYGCP07315 174 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 MSMBP08118 114 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 BCL2P10415 239 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 KRTAP10-9P60411 292 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 TMEM249Q2WGJ8 235 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 F11RQ9Y624 299 aaKnown RBP12.48□□□□□ -0.41
HDAC8-209ENST00000373589 TENM4Q6N022 2769 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 A0A096LNT2 108 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 CNIH1O95406 144 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 SRP19P09132 144 aaKnown RBP12.48□□□□□ -0.41
HDAC8-209ENST00000373589 FAM106CPP0CH98 169 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 APELAP0DMC3 54 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 TMEM11P17152 192 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 C19orf35Q6ZS72 473 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 RXFP4Q8TDU9 374 aa12.48□□□□□ -0.41
HDAC8-209ENST00000373589 NKX6-2Q9C056 277 aaPredicted RBP12.48□□□□□ -0.41
HDAC8-209ENST00000373589 PTPN13Q12923 2485 aa12.47□□□□□ -0.41
HDAC8-209ENST00000373589 IGHV1-69DA0A0B4J2H0 117 aa12.47□□□□□ -0.41
HDAC8-209ENST00000373589 ZFP92A6NM28 416 aa12.47□□□□□ -0.41
HDAC8-209ENST00000373589 IGHV1-69P01742 117 aa12.47□□□□□ -0.41
HDAC8-209ENST00000373589 OR10J1P30954 320 aa12.47□□□□□ -0.41
HDAC8-209ENST00000373589 BRS3P32247 399 aa12.47□□□□□ -0.41
HDAC8-209ENST00000373589 FXYD3Q14802 87 aa12.47□□□□□ -0.41
HDAC8-209ENST00000373589 FAM120AOSQ5T036 256 aa12.47□□□□□ -0.41
HDAC8-209ENST00000373589 ZNF562Q6V9R5 426 aa12.47□□□□□ -0.41
HDAC8-209ENST00000373589 ACY3Q96HD9 319 aa12.47□□□□□ -0.41
HDAC8-209ENST00000373589 MRPL36Q9P0J6 103 aaKnown RBP12.47□□□□□ -0.41
HDAC8-209ENST00000373589 DMRT1Q9Y5R6 373 aa12.47□□□□□ -0.41
HDAC8-209ENST00000373589 A0A1W2PPV4 95 aa12.46□□□□□ -0.41
HDAC8-209ENST00000373589 B4DSR2 109 aa12.46□□□□□ -0.41
HDAC8-209ENST00000373589 CORTO00230 105 aa12.46□□□□□ -0.41
HDAC8-209ENST00000373589 PLA2G2AP14555 144 aa12.46□□□□□ -0.41
HDAC8-209ENST00000373589 CTRB1P17538 263 aa12.46□□□□□ -0.41
HDAC8-209ENST00000373589 CTRB2Q6GPI1 263 aa12.46□□□□□ -0.41
HDAC8-209ENST00000373589 ETFRF1Q6IPR1 90 aa12.46□□□□□ -0.41
HDAC8-209ENST00000373589 THAP8Q8NA92 274 aa12.46□□□□□ -0.41
HDAC8-209ENST00000373589 NPIPB3Q92617 1050 aa12.46□□□□□ -0.41
HDAC8-209ENST00000373589 TMPRSS5Q9H3S3 457 aa12.46□□□□□ -0.41
HDAC8-209ENST00000373589 IGKV1D-37A0A075B6S9 117 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 NCBP2LA6PVI3 153 aaKnown RBP12.45□□□□□ -0.42
HDAC8-209ENST00000373589 SNAPINO95295 136 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 IFNA1P01562 189 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 CX3CL1P78423 397 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 BTN1A1Q13410 526 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 RBMS3Q6XE24 437 aaKnown RBP12.45□□□□□ -0.42
HDAC8-209ENST00000373589 MISP3Q96FF7 219 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 VAX2Q9UIW0 290 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 POLQO75417 2590 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 FBP1P09467 338 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 STAG3L2P0CL84 134 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 STAG3L3P0CL85 134 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 NPBWR1P48145 328 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 SOHLH1Q5JUK2 328 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 RUSC1-AS1Q66K80 236 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 CYP2G1PQ6ZSU1 146 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 SLC35E3Q7Z769 313 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 Q8N9W7 124 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 TMEM116Q8NCL8 245 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 ABHD5Q8WTS1 349 aa12.45□□□□□ -0.42
HDAC8-209ENST00000373589 SLC25A33Q9BSK2 321 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms