RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 MALP21145 153 aa11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 TRAV41A0A0B4J266 112 aa11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 CD300EQ496F6 205 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 JMJD8Q96S16 334 aa11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 INAFM2P0DMQ5 153 aa11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 RPL31P62899 125 aaKnown RBP11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 ZNF703Q9H7S9 590 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 OR2H2O95918 312 aa11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 C1QCP02747 245 aa11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 AZU1P20160 251 aa11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 RPL27AP46776 148 aaKnown RBP11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 MPV17L2Q567V2 206 aa11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 CXorf66Q5JRM2 361 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 ITLN1Q8WWA0 313 aa11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 ZNF646O15015 1829 aaPredicted RBP11.89□□□□□ -0.51
RAPGEF1-202ENST00000372190 DXOO77932 396 aaKnown RBP11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 HLA-DQB1P01920 261 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 APELAP0DMC3 54 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 FSTP19883 344 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 SRSF1Q07955 248 aaKnown RBP eCLIP11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 PPP1R27Q86WC6 154 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 CCL13Q99616 98 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 KLHDC3Q9BQ90 382 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 GAGE12HA6NDE8 117 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 C9JAW5 83 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 IFI27P40305 119 aaPredicted RBP11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 SMIM8Q96KF7 97 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 IGLV3-21P80748 117 aaPredicted RBP11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 SEMA5BQ9P283 1151 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 K7N7A8 449 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 CEACAM4O75871 244 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 H2BFSP57053 126 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 ECSCRQ19T08 205 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 C1QL4Q86Z23 238 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 KNTC1P50748 2209 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 IFI6P09912 130 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 FMC1Q96HJ9 113 aa11.88□□□□□ -0.51
RAPGEF1-202ENST00000372190 TRAV8-3A0A0A6YYJ7 113 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 RAMP1O60894 148 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 GLRXP35754 106 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 CD8AP01732 235 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 UCP1P25874 307 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 UTF1Q5T230 341 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 DRAM1Q8N682 238 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 UNC13CQ8NB66 2214 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 EGR1P18146 543 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 ZFP36L1Q07352 338 aaKnown RBP11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 GNB1LQ9BYB4 327 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 ZNHIT1O43257 154 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 MOSP00540 346 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 HEPN1Q6WQI6 88 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 FAM89BQ8N5H3 189 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 V9GYY9 64 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 TRBV5-5A0A0J9YX44 114 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 LINC01549A6NIU2 74 aa11.87□□□□□ -0.51
RAPGEF1-202ENST00000372190 B9A039 149 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 LIMS1P48059 325 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 WDR82Q6UXN9 313 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 EAF1Q96JC9 268 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 CELA3AP09093 270 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 IFI27L1Q96BM0 104 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 SOCS3O14543 225 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 TBX6O95947 436 aaPredicted RBP11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 RFPL3SP0C7P2 107 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 RND2P52198 227 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 ATP5L2Q7Z4Y8 100 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 ZNF645Q8N7E2 425 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 TPRX1Q8N7U7 411 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 GATAD1Q8WUU5 269 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 MYOFQ9NZM1 2061 aa11.86□□□□□ -0.51
RAPGEF1-202ENST00000372190 ORMDL2Q53FV1 153 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 RCC1LQ96I51 464 aaKnown RBP11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 IGHV3OR16-12A0A075B7B8 117 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 A0A087X0K7 114 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 F8W1H4 67 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 RPL23P62829 140 aaKnown RBP11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 SELENOKQ9Y6D0 94 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 A0A1B0GWJ7 208 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 NTN3O00634 580 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 EFEMP2O95967 443 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 APOBEC3AP31941 199 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 CD200R1LQ6Q8B3 271 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 CLDND2Q8NHS1 167 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 MUC21A0A0G2JKD1 596 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 MUC21A0A140T8X8 626 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 CLDN14O95500 239 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 CD33P20138 364 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 FAM27E3Q08E93 113 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 MUC21Q5SSG8 566 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 ZNF488Q96MN9 340 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 CHCHD2Q9Y6H1 151 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 M0R381 172 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 ZNF688P0C7X2 276 aa11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 MRPL14Q6P1L8 145 aaKnown RBP11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 CIARTQ8N365 385 aaPredicted RBP11.85□□□□□ -0.51
RAPGEF1-202ENST00000372190 GUSBP1Q15486 140 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 HIGD1CA8MV81 97 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 HAX1O00165 279 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 EREGO14944 169 aa11.84□□□□□ -0.51
RAPGEF1-202ENST00000372190 NDUFA2O43678 99 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms