RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 PLPPR1Q8TBJ4 325 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 MRPL32Q9BYC8 188 aaKnown RBP10.68□□□□□ -0.7
GPC4-201ENST00000370828 OSTCQ9NRP0 149 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 RNF7Q9UBF6 113 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 FAM181BA6NEQ2 426 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 PGPEP1Q9NXJ5 209 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 QSER1Q2KHR3 1735 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 IGHV2OR16-5A0A0B4J2B6 119 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 IGHV4-34P06331 123 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 GPX1P07203 203 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 RPL27AP46776 148 aaKnown RBP10.68□□□□□ -0.7
GPC4-201ENST00000370828 GAGE2AQ6NT46 116 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 LINC00305Q7Z4B0 112 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 VOPP1Q96AW1 172 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 RPP21Q9H633 154 aaKnown RBP10.68□□□□□ -0.7
GPC4-201ENST00000370828 TDRD15B5MCY1 1934 aaKnown RBP10.68□□□□□ -0.7
GPC4-201ENST00000370828 GREB1LQ9C091 1923 aaPredicted RBP10.68□□□□□ -0.7
GPC4-201ENST00000370828 A0A1B0GUT8 65 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 SRFP11831 508 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 C5orf24Q7Z6I8 188 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 SHISA5Q8N114 240 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 GP6Q9HCN6 339 aa10.68□□□□□ -0.7
GPC4-201ENST00000370828 PFN1P07737 140 aaKnown RBP10.67□□□□□ -0.7
GPC4-201ENST00000370828 AKAP6Q13023 2319 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 DUSP15Q9H1R2 295 aaPredicted RBP10.67□□□□□ -0.7
GPC4-201ENST00000370828 V9GYY9 64 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 DOCK11Q5JSL3 2073 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 FOXC2Q99958 501 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 COL4A5P29400 1685 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 A0A1W2PRE2 83 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 DNM1P46Q6ZS02 220 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 TMEM54Q969K7 222 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 ZNF714Q96N38 554 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 CCL13Q99616 98 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 WNT9BO14905 357 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 CCL25O15444 150 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 NBEAP1P0C6P0 100 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 OR9G9P0C7N8 305 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 GFRA1P56159 465 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 DGAT2L7PQ6IED9 249 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 CALYQ9NYX4 217 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 RABAC1Q9UI14 185 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 TDRD6O60522 2096 aaKnown RBP10.67□□□□□ -0.7
GPC4-201ENST00000370828 CEP250Q9BV73 2442 aa10.67□□□□□ -0.7
GPC4-201ENST00000370828 CGB1A6NKQ9 187 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 PSG3Q16557 428 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 PEAR1Q5VY43 1037 aaPredicted RBP10.66□□□□□ -0.7
GPC4-201ENST00000370828 DOCK4Q8N1I0 1966 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.66□□□□□ -0.7
GPC4-201ENST00000370828 SYNGR3O43761 229 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 GNG5P63218 68 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 PSG9Q00887 426 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 CSRP2Q16527 193 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 FCGR2BP31994 310 aaPredicted RBP10.66□□□□□ -0.7
GPC4-201ENST00000370828 CACNG7P62955 275 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.66□□□□□ -0.7
GPC4-201ENST00000370828 TDHQ8IZJ6 230 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 OR5P3Q8WZ94 311 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 SCARF2Q96GP6 870 aaPredicted RBP10.66□□□□□ -0.7
GPC4-201ENST00000370828 MCRIP2Q9BUT9 160 aaKnown RBP10.66□□□□□ -0.7
GPC4-201ENST00000370828 ZNF576Q9H609 170 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 PSME4Q14997 1843 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 IGHV2-70DA0A0C4DH43 119 aa10.66□□□□□ -0.7
GPC4-201ENST00000370828 RBPMS2Q6ZRY4 209 aaKnown RBP10.65□□□□□ -0.7
GPC4-201ENST00000370828 OR4A5Q8NH83 315 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 FBXL7Q9UJT9 491 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 PILRBQ9UKJ0 227 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 LILRA1O75019 489 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 ZNF146Q15072 292 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 TMEM101Q96IK0 257 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 AGMATQ9BSE5 352 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 ZNF703Q9H7S9 590 aaPredicted RBP10.65□□□□□ -0.7
GPC4-201ENST00000370828 TRBV20OR9-2A0A075B6H5 130 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 IGKV1-12A0A0C4DH73 117 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 PRRG2O14669 202 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 IGKV1D-12P01611 117 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 NMSQ5H8A3 153 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 CLUHP3Q96NS8 147 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 SPTA1P02549 2419 aa10.65□□□□□ -0.7
GPC4-201ENST00000370828 CCL1P22362 96 aa10.65□□□□□ -0.71
GPC4-201ENST00000370828 ANOS1P23352 680 aa10.65□□□□□ -0.71
GPC4-201ENST00000370828 QRFPP83859 136 aa10.65□□□□□ -0.71
GPC4-201ENST00000370828 SPEM1Q8N4L4 309 aa10.65□□□□□ -0.71
GPC4-201ENST00000370828 PSMB11A5LHX3 300 aa10.64□□□□□ -0.71
GPC4-201ENST00000370828 CRXO43186 299 aaPredicted RBP10.64□□□□□ -0.71
GPC4-201ENST00000370828 ZNF436-AS1Q8NC38 126 aaPredicted RBP10.64□□□□□ -0.71
GPC4-201ENST00000370828 WDR83OSQ9Y284 106 aa10.64□□□□□ -0.71
GPC4-201ENST00000370828 APC2O95996 2303 aa10.64□□□□□ -0.71
GPC4-201ENST00000370828 PPIHO43447 177 aaKnown RBP10.64□□□□□ -0.71
GPC4-201ENST00000370828 TRACP01848 142 aa10.64□□□□□ -0.71
GPC4-201ENST00000370828 DCTN5Q9BTE1 182 aa10.64□□□□□ -0.71
GPC4-201ENST00000370828 MRPS18CQ9Y3D5 142 aaKnown RBP10.64□□□□□ -0.71
GPC4-201ENST00000370828 TRBV7-9A0A0J9YWB2 115 aa10.64□□□□□ -0.71
GPC4-201ENST00000370828 LHX2P50458 406 aa10.64□□□□□ -0.71
GPC4-201ENST00000370828 EFNB3Q15768 340 aa10.64□□□□□ -0.71
GPC4-201ENST00000370828 INO80CQ6PI98 192 aaPredicted RBP10.64□□□□□ -0.71
GPC4-201ENST00000370828 PHF7Q9BWX1 381 aaPredicted RBP10.64□□□□□ -0.71
GPC4-201ENST00000370828 CRISPLD2Q9H0B8 497 aa10.64□□□□□ -0.71
GPC4-201ENST00000370828 ZNF581Q9P0T4 197 aa10.64□□□□□ -0.71
GPC4-201ENST00000370828 IGHV5-10-1A0A0J9YXX1 117 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms