RNA–Protein interactions for RNA: ENST00000370496.3

COL9A1-204, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-204ENST00000370496 GGNBP1Q5YKI7 109 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 CLEC19AQ6UXS0 136 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 VN1R17PQ8TDU5 208 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 DLX4Q92988 240 aaPredicted RBP11.41□□□□□ -0.58
COL9A1-204ENST00000370496 PINX1Q96BK5 328 aaKnown RBP11.41□□□□□ -0.58
COL9A1-204ENST00000370496 HSPB7Q9UBY9 170 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 BMPR1BO00238 502 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 ADAP1O75689 374 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 SLC25A6P12236 298 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 GPR183P32249 361 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 NRARPQ7Z6K4 114 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 UBAC2Q8NBM4 344 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 MITD1Q8WV92 249 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 SEC22CQ9BRL7 303 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 HIPK2Q9H2X6 1198 aa11.41□□□□□ -0.58
COL9A1-204ENST00000370496 CORTO00230 105 aa11.4□□□□□ -0.59
COL9A1-204ENST00000370496 RNASE2P10153 161 aaKnown RBP11.4□□□□□ -0.59
COL9A1-204ENST00000370496 HTR2BP41595 481 aa11.4□□□□□ -0.59
COL9A1-204ENST00000370496 C9orf66Q5T8R8 295 aa11.4□□□□□ -0.59
COL9A1-204ENST00000370496 PLET1Q6UQ28 207 aa11.4□□□□□ -0.59
COL9A1-204ENST00000370496 SLC24A4Q8NFF2 622 aa11.4□□□□□ -0.59
COL9A1-204ENST00000370496 ZNF502Q8TBZ5 544 aa11.4□□□□□ -0.59
COL9A1-204ENST00000370496 DTD1Q8TEA8 209 aa11.4□□□□□ -0.59
COL9A1-204ENST00000370496 ZNF431Q8TF32 576 aaPredicted RBP11.4□□□□□ -0.59
COL9A1-204ENST00000370496 RBKSQ9H477 322 aa11.4□□□□□ -0.59
COL9A1-204ENST00000370496 C21orf62Q9NYP8 219 aa11.4□□□□□ -0.59
COL9A1-204ENST00000370496 K7EIM0 57 aa11.39□□□□□ -0.59
COL9A1-204ENST00000370496 GGCTO75223 188 aaKnown RBP11.39□□□□□ -0.59
COL9A1-204ENST00000370496 MT-CO2P00403 227 aa11.39□□□□□ -0.59
COL9A1-204ENST00000370496 OPRK1P41145 380 aa11.39□□□□□ -0.59
COL9A1-204ENST00000370496 SYNJ2BPP57105 145 aa11.39□□□□□ -0.59
COL9A1-204ENST00000370496 TATDN3Q17R31 274 aa11.39□□□□□ -0.59
COL9A1-204ENST00000370496 Q56UQ5 140 aa11.39□□□□□ -0.59
COL9A1-204ENST00000370496 UXS1Q8NBZ7 420 aa11.39□□□□□ -0.59
COL9A1-204ENST00000370496 SCARB1Q8WTV0 552 aa11.39□□□□□ -0.59
COL9A1-204ENST00000370496 ZC4H2Q9NQZ6 224 aa11.39□□□□□ -0.59
COL9A1-204ENST00000370496 OR2T8A6NH00 312 aa11.38□□□□□ -0.59
COL9A1-204ENST00000370496 FAM90A26D6RGX4 464 aa11.38□□□□□ -0.59
COL9A1-204ENST00000370496 PITX3O75364 302 aa11.38□□□□□ -0.59
COL9A1-204ENST00000370496 SAP30O75446 220 aa11.38□□□□□ -0.59
COL9A1-204ENST00000370496 NPY1RP25929 384 aa11.38□□□□□ -0.59
COL9A1-204ENST00000370496 BEAN1Q3B7T3 259 aa11.38□□□□□ -0.59
COL9A1-204ENST00000370496 C11orf87Q6NUJ2 197 aa11.38□□□□□ -0.59
COL9A1-204ENST00000370496 ELOVL1Q9BW60 279 aa11.38□□□□□ -0.59
COL9A1-204ENST00000370496 GPN1Q9HCN4 374 aaPredicted RBP11.38□□□□□ -0.59
COL9A1-204ENST00000370496 MPTX1A8MV57 137 aa11.37□□□□□ -0.59
COL9A1-204ENST00000370496 I3L2K1 104 aa11.37□□□□□ -0.59
COL9A1-204ENST00000370496 TGOLN2O43493 480 aa11.37□□□□□ -0.59
COL9A1-204ENST00000370496 MED6O75586 246 aa11.37□□□□□ -0.59
COL9A1-204ENST00000370496 IFNA10P01566 189 aa11.37□□□□□ -0.59
COL9A1-204ENST00000370496 CLEC3BP05452 202 aa11.37□□□□□ -0.59
COL9A1-204ENST00000370496 IAPPP10997 89 aa11.37□□□□□ -0.59
COL9A1-204ENST00000370496 BSXQ3C1V8 233 aa11.37□□□□□ -0.59
COL9A1-204ENST00000370496 C12orf45Q8N5I9 185 aaPredicted RBP11.37□□□□□ -0.59
COL9A1-204ENST00000370496 DUSP18Q8NEJ0 188 aa11.37□□□□□ -0.59
COL9A1-204ENST00000370496 OR9G4Q8NGQ1 327 aa11.37□□□□□ -0.59
COL9A1-204ENST00000370496 BSCL2Q96G97 398 aaPredicted RBP11.37□□□□□ -0.59
COL9A1-204ENST00000370496 GAR1Q9NY12 217 aaKnown RBP11.37□□□□□ -0.59
COL9A1-204ENST00000370496 NOTCH3Q9UM47 2321 aa11.37□□□□□ -0.59
COL9A1-204ENST00000370496 RPS10-NUDT3A0A1W2PQS6 291 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 FAM25EA8MYX2 175 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 INMT-MINDY4F8WBC2 141 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 WRBO00258 174 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 CCSO14618 274 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 OR2C1O95371 312 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 SCGB1D2O95969 90 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 IGHV3-48P01763 117 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 MFAP4P55083 255 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 KLF5Q13887 457 aaPredicted RBP11.36□□□□□ -0.59
COL9A1-204ENST00000370496 IAH1Q2TAA2 248 aaPredicted RBP11.36□□□□□ -0.59
COL9A1-204ENST00000370496 C2orf83Q53S99 150 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 ACSM6Q6P461 480 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 NOXA1Q86UR1 476 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 CIB3Q96Q77 187 aaPredicted RBP11.36□□□□□ -0.59
COL9A1-204ENST00000370496 OR4C12Q96R67 309 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 ATP6V0BQ99437 205 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 MAGT1Q9H0U3 335 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 PEMTQ9UBM1 199 aa11.36□□□□□ -0.59
COL9A1-204ENST00000370496 NOTCH1P46531 2555 aa11.35□□□□□ -0.59
COL9A1-204ENST00000370496 SYNGR2O43760 224 aa11.35□□□□□ -0.59
COL9A1-204ENST00000370496 GNG7O60262 68 aa11.35□□□□□ -0.59
COL9A1-204ENST00000370496 PRAF2O60831 178 aa11.35□□□□□ -0.59
COL9A1-204ENST00000370496 IL5P05113 134 aa11.35□□□□□ -0.59
COL9A1-204ENST00000370496 NKX2-1P43699 371 aaPredicted RBP11.35□□□□□ -0.59
COL9A1-204ENST00000370496 INSL3P51460 131 aa11.35□□□□□ -0.59
COL9A1-204ENST00000370496 KPRPQ5T749 579 aaPredicted RBP11.35□□□□□ -0.59
COL9A1-204ENST00000370496 SPSB3Q6PJ21 355 aa11.35□□□□□ -0.59
COL9A1-204ENST00000370496 U3KQ87 197 aa11.35□□□□□ -0.59
COL9A1-204ENST00000370496 IGHV3-35A0A0C4DH35 117 aa11.34□□□□□ -0.59
COL9A1-204ENST00000370496 ZNF320A2RRD8 509 aa11.34□□□□□ -0.59
COL9A1-204ENST00000370496 C5orf51A6NDU8 294 aa11.34□□□□□ -0.59
COL9A1-204ENST00000370496 NUPL2O15504 423 aaKnown RBP11.34□□□□□ -0.59
COL9A1-204ENST00000370496 SCGB2A1O75556 95 aa11.34□□□□□ -0.59
COL9A1-204ENST00000370496 PTTG1O95997 202 aa11.34□□□□□ -0.59
COL9A1-204ENST00000370496 DEFA6Q01524 100 aa11.34□□□□□ -0.59
COL9A1-204ENST00000370496 FAM106AQ4KMX7 169 aa11.34□□□□□ -0.59
COL9A1-204ENST00000370496 PVRIGQ6DKI7 326 aa11.34□□□□□ -0.59
COL9A1-204ENST00000370496 RNASEH2CQ8TDP1 164 aaKnown RBP11.34□□□□□ -0.59
COL9A1-204ENST00000370496 OR10C1Q96KK4 312 aa11.34□□□□□ -0.59
COL9A1-204ENST00000370496 TXN2Q99757 166 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms