RNA–Protein interactions for RNA: ENST00000368215.7

PTPRK-206, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 4,651 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-206ENST00000368215 EFNB3Q15768 340 aa6.98□□□□□ -1.29
PTPRK-206ENST00000368215 LINC00305Q7Z4B0 112 aa6.98□□□□□ -1.29
PTPRK-206ENST00000368215 NEUROG1Q92886 237 aa6.98□□□□□ -1.29
PTPRK-206ENST00000368215 RNASE6Q93091 150 aaKnown RBP6.98□□□□□ -1.29
PTPRK-206ENST00000368215 EML5Q05BV3 1969 aa6.98□□□□□ -1.29
PTPRK-206ENST00000368215 APCSP02743 223 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 RELBQ01201 579 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 MLANAQ16655 118 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 SSX8Q7RTT4 187 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 SEPSECSQ9HD40 501 aaKnown RBP6.97□□□□□ -1.29
PTPRK-206ENST00000368215 HIST1H1EP10412 219 aaKnown RBP6.97□□□□□ -1.29
PTPRK-206ENST00000368215 LMO1P25800 156 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 LGALS7P47929 136 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 MEF2CQ06413 473 aaPredicted RBP6.97□□□□□ -1.29
PTPRK-206ENST00000368215 PRR30Q53SZ7 412 aaPredicted RBP6.97□□□□□ -1.29
PTPRK-206ENST00000368215 FAM90A2PQ658T7 463 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 TMEM144Q7Z5S9 345 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 HAPLN4Q86UW8 402 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 A0A1B0GW64 132 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 DPRXA6NFQ7 191 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 M0R2Z0 102 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 IGKV1-16P04430 117 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 CD81P60033 236 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 PKIAP61925 76 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 GAFA1Q96PS6 74 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 MGST2Q99735 147 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 IGKV3-7A0A075B6H7 116 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 TEX50A0A1B0GTY4 177 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 ZNF726P1Q15940 193 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 TMEM30BQ3MIR4 351 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 Q6ZPA2 131 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 OCC1Q8TAD7 63 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 RBM14Q96PK6 669 aaKnown RBP6.97□□□□□ -1.29
PTPRK-206ENST00000368215 RAXQ9Y2V3 346 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 NOTCH3Q9UM47 2321 aa6.97□□□□□ -1.29
PTPRK-206ENST00000368215 K7EM74 188 aa6.96□□□□□ -1.29
PTPRK-206ENST00000368215 UBE2CO00762 179 aa6.96□□□□□ -1.29
PTPRK-206ENST00000368215 PYYP10082 97 aa6.96□□□□□ -1.29
PTPRK-206ENST00000368215 UCNP55089 124 aa6.96□□□□□ -1.29
PTPRK-206ENST00000368215 C1QL4Q86Z23 238 aa6.96□□□□□ -1.29
PTPRK-206ENST00000368215 ANKHD1Q8IWZ3 2542 aaKnown RBP6.96□□□□□ -1.3
PTPRK-206ENST00000368215 F2RL2O00254 374 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 FOXH1O75593 365 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 IGKV1D-33P01593 117 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 IGKV1-33P01594 117 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 LIPFP07098 398 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 FCGR2BP31994 310 aaPredicted RBP6.96□□□□□ -1.3
PTPRK-206ENST00000368215 PPOXP50336 477 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 TMEM183BQ1AE95 376 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 TMEM200BQ69YZ2 307 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 TMEM183AQ8IXX5 376 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 RNASE7Q9H1E1 156 aaKnown RBP6.96□□□□□ -1.3
PTPRK-206ENST00000368215 TRAV5A0A0B4J249 113 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 FOLR2P14207 255 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 PRCDQ00LT1 54 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 LEMD1Q68G75 181 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 LYPD2Q6UXB3 125 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 FA2HQ7L5A8 372 aa6.96□□□□□ -1.3
PTPRK-206ENST00000368215 IGHV3OR16-8A0A075B7F1 116 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 J3KRW8 73 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 SRIP30626 198 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 BRS3P32247 399 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 ADIPOQQ15848 244 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 C10orf91Q5T1B1 145 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 C11orf53Q8IXP5 236 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 FAM215AQ9Y5M1 114 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 LOC105371242A0A075B767 164 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 LY6HO94772 140 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 IGHV3-23P01764 117 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 ZNF134P52741 427 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 DLX1P56177 255 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 SPRNQ5BIV9 151 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 PRSS3P2Q8NHM4 247 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 HNRNPA3P51991 378 aaKnown RBP6.95□□□□□ -1.3
PTPRK-206ENST00000368215 AARDQ4LEZ3 155 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 SLC25A33Q9BSK2 321 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 CLEC5AQ9NY25 188 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 IGHV3OR16-10A0A075B7F0 116 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 STAG3L2P0CL84 134 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 STAG3L3P0CL85 134 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 CD69Q07108 199 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 ZNF788Q6ZQV5 615 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 PIP4P1Q86T03 277 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 OR52E5Q8NH55 327 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 PGLYRP4Q96LB8 373 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 C1RLQ9NZP8 487 aa6.95□□□□□ -1.3
PTPRK-206ENST00000368215 TMEM178BH3BS89 294 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 CORTO00230 105 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 MMP23AO75900 390 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 SOD3P08294 240 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 NBEAP1P0C6P0 100 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 GNG5P63218 68 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 TBR1Q16650 682 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 TMEM177Q53S58 311 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 KHDC1LQ5JSQ8 128 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 GOLT1AQ6ZVE7 132 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 DIRC3C9JPN6 131 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 IGLV1-44P01699 117 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 COX19Q49B96 90 aa6.94□□□□□ -1.3
PTPRK-206ENST00000368215 CCDC144NLQ6NUI1 221 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms