RNA–Protein interactions for RNA: ENST00000361654.8

CLIP1-203, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 5,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-203ENST00000361654 ABCA4P78363 2273 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 OTORQ9NRC9 128 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 C17orf98A8MV24 154 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 IGHV1-46P01743 117 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 SRIP30626 198 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 SRSF7Q16629 238 aaKnown RBP eCLIP9.16□□□□□ -0.94
CLIP1-203ENST00000361654 TMEM136Q6ZRR5 245 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 CEP250Q9BV73 2442 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 SLC25A34Q6PIV7 304 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 TMEM160Q9NX00 188 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 IGFBP2P18065 325 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 TMEM86BQ8N661 226 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 ZNF414Q96IQ9 312 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 RGPD3A6NKT7 1758 aaPredicted RBP9.16□□□□□ -0.94
CLIP1-203ENST00000361654 CNOT1A5YKK6 2376 aaKnown RBP9.16□□□□□ -0.94
CLIP1-203ENST00000361654 LY75O60449 1722 aa9.16□□□□□ -0.94
CLIP1-203ENST00000361654 SAA2-SAA4A0A096LPE2 208 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 ADARB2-AS1A8MUL3 147 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 H3BUX3 64 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 SAA2P0DJI9 122 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-203ENST00000361654 VMO1Q7Z5L0 202 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 FAM131CQ96AQ9 280 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 C5orf66Q9H5L9 145 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 MUC21Q5SSG8 566 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 GLMPQ8WWB7 406 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 PARLQ9H300 379 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 NRN1Q9NPD7 142 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 UBR3Q6ZT12 1888 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 MPTX1A8MV57 137 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 COL24A1Q17RW2 1714 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 IGLV3-32A0A0A0MS00 114 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 PQLC2LA1A4F0 135 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 GCM2O75603 506 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-203ENST00000361654 SPSB3Q6PJ21 355 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 ZCCHC24Q8N2G6 241 aaKnown RBP9.15□□□□□ -0.94
CLIP1-203ENST00000361654 PHLDA1Q8WV24 401 aaPredicted RBP9.15□□□□□ -0.94
CLIP1-203ENST00000361654 NPCDR1Q9BY65 106 aa9.15□□□□□ -0.94
CLIP1-203ENST00000361654 KLHL30-AS1Q8NEE0 82 aa9.15□□□□□ -0.95
CLIP1-203ENST00000361654 NPDC1Q9NQX5 325 aaPredicted RBP9.15□□□□□ -0.95
CLIP1-203ENST00000361654 CACNA1BQ00975 2339 aa9.15□□□□□ -0.95
CLIP1-203ENST00000361654 GAGE10A6NGK3 116 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 M0R1W7 72 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 TMEM144Q7Z5S9 345 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 WBP1Q96G27 269 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 RNF5Q99942 180 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 AICDAQ9GZX7 198 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 Q9H3A6 140 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 DEPPQ9NTK1 212 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 HOXA3O43365 443 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-203ENST00000361654 CD24P25063 80 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 Q5PR19 223 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 ATRAIDQ6UW56 229 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 MCRIP2Q9BUT9 160 aaKnown RBP9.14□□□□□ -0.95
CLIP1-203ENST00000361654 TMEM50AO95807 157 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 HAPLN4Q86UW8 402 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 SFRP2Q96HF1 295 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 GRIFINA4D1Z8 144 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 C15orf61A6NNL5 157 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 K7ERU9 68 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 CEACAM8P31997 349 aaPredicted RBP9.14□□□□□ -0.95
CLIP1-203ENST00000361654 SIGLEC15Q6ZMC9 328 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 NR2C2APQ86WQ0 139 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 PIP4P2Q8N4L2 257 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 TMEM190Q8WZ59 177 aa9.14□□□□□ -0.95
CLIP1-203ENST00000361654 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-203ENST00000361654 VENTXO95231 258 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 UCP1P25874 307 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 SLC25A38Q96DW6 304 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 CACNA1EQ15878 2313 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 LINC00587B1AMM8 73 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 BEND2Q8NDZ0 799 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 NEUROG1Q92886 237 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 USMG5Q96IX5 58 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 AKAP6Q13023 2319 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 C1QL1O75973 258 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 LINC00271P0C7V0 271 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 CD200R1LQ6Q8B3 271 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 Q6ZS92 163 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 LCNL1Q6ZST4 164 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 RPP21Q9H633 154 aaKnown RBP9.13□□□□□ -0.95
CLIP1-203ENST00000361654 TBL2Q9Y4P3 447 aaKnown RBP9.13□□□□□ -0.95
CLIP1-203ENST00000361654 LOC102724200A0A096LPH7 203 aaPredicted RBP9.13□□□□□ -0.95
CLIP1-203ENST00000361654 SOD3P08294 240 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 MORN2Q502X0 79 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 SPATA45Q537H7 98 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 COL5A1-AS1Q5SY13 56 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 ADAMTSL1Q8N6G6 1762 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 A8MXK9 166 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 PIN1P1O15428 100 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 RPL36AP83881 106 aaKnown RBP9.13□□□□□ -0.95
CLIP1-203ENST00000361654 PRCDQ00LT1 54 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 TTC9CQ8N5M4 171 aa9.13□□□□□ -0.95
CLIP1-203ENST00000361654 RPL36ALQ969Q0 106 aaKnown RBP9.13□□□□□ -0.95
CLIP1-203ENST00000361654 TDRD6O60522 2096 aaKnown RBP9.12□□□□□ -0.95
CLIP1-203ENST00000361654 SPTBN2O15020 2390 aa9.12□□□□□ -0.95
CLIP1-203ENST00000361654 TRAV8-6A0A0B4J262 113 aa9.12□□□□□ -0.95
CLIP1-203ENST00000361654 LINC01549A6NIU2 74 aa9.12□□□□□ -0.95
CLIP1-203ENST00000361654 CKS1BP61024 79 aa9.12□□□□□ -0.95
CLIP1-203ENST00000361654 RARRES2Q99969 163 aa9.12□□□□□ -0.95
CLIP1-203ENST00000361654 CCDC88CQ9P219 2028 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms