RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 ST8SIA2Q92186 375 aa10.01□□□□□ -0.81
VPS29-201ENST00000360579 TSC22D3Q99576 134 aa10.01□□□□□ -0.81
VPS29-201ENST00000360579 ELOA3CA0A087WX78 387 aaPredicted RBP10□□□□□ -0.81
VPS29-201ENST00000360579 I3L2K1 104 aa10□□□□□ -0.81
VPS29-201ENST00000360579 EBAG9O00559 213 aa10□□□□□ -0.81
VPS29-201ENST00000360579 KRASP01116 189 aa10□□□□□ -0.81
VPS29-201ENST00000360579 GIG44P09565 113 aaPredicted RBP10□□□□□ -0.81
VPS29-201ENST00000360579 PTHLHP12272 177 aa10□□□□□ -0.81
VPS29-201ENST00000360579 HERV-K104P61576 105 aa10□□□□□ -0.81
VPS29-201ENST00000360579 TBCEQ15813 527 aaPredicted RBP10□□□□□ -0.81
VPS29-201ENST00000360579 C22orf42Q6IC83 251 aa10□□□□□ -0.81
VPS29-201ENST00000360579 TMEM17Q86X19 198 aa10□□□□□ -0.81
VPS29-201ENST00000360579 TSPAN14Q8NG11 270 aa10□□□□□ -0.81
VPS29-201ENST00000360579 MISP3Q96FF7 219 aa10□□□□□ -0.81
VPS29-201ENST00000360579 TMEM14BQ9NUH8 114 aa10□□□□□ -0.81
VPS29-201ENST00000360579 RABAC1Q9UI14 185 aa10□□□□□ -0.81
VPS29-201ENST00000360579 TBC1D24Q9ULP9 559 aa10□□□□□ -0.81
VPS29-201ENST00000360579 X6R8D5 127 aa10□□□□□ -0.81
VPS29-201ENST00000360579 MT-CO2P00403 227 aa9.99□□□□□ -0.81
VPS29-201ENST00000360579 IFNA10P01566 189 aa9.99□□□□□ -0.81
VPS29-201ENST00000360579 NPY1RP25929 384 aa9.99□□□□□ -0.81
VPS29-201ENST00000360579 TOMM20LQ6UXN7 152 aa9.99□□□□□ -0.81
VPS29-201ENST00000360579 ZNF114Q8NC26 417 aa9.99□□□□□ -0.81
VPS29-201ENST00000360579 GRAMD2BQ96HH9 432 aa9.99□□□□□ -0.81
VPS29-201ENST00000360579 RHBDL2Q9NX52 303 aa9.99□□□□□ -0.81
VPS29-201ENST00000360579 NSG2Q9Y328 171 aa9.99□□□□□ -0.81
VPS29-201ENST00000360579 A0A1W2PS18 150 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 IFNA21P01568 189 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 IFNA17P01571 189 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 RLN1P04808 185 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 GNRHRP30968 328 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 G6PCP35575 357 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 LPAR6P43657 344 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 NPBWR1P48145 328 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 C12orf74Q32Q52 190 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 UBE2UQ5VVX9 321 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 CMTM1Q8IZ96 169 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 FAM24BQ8N5W8 94 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 OR5AP2Q8NGF4 316 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 FCAMRQ8WWV6 532 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 KRTAP4-5Q9BYR2 181 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 DAPK2Q9UIK4 370 aa9.98□□□□□ -0.81
VPS29-201ENST00000360579 TRAV18A0A075B6X5 111 aa9.97□□□□□ -0.81
VPS29-201ENST00000360579 A0A0A6YYH2 397 aa9.97□□□□□ -0.81
VPS29-201ENST00000360579 SMIM30A4D0T7 59 aa9.97□□□□□ -0.81
VPS29-201ENST00000360579 A6NJ64 397 aa9.97□□□□□ -0.81
VPS29-201ENST00000360579 PGLYRP1O75594 196 aaPredicted RBP9.97□□□□□ -0.81
VPS29-201ENST00000360579 APOHP02749 345 aaPredicted RBP9.97□□□□□ -0.81
VPS29-201ENST00000360579 C4BPBP20851 252 aa9.97□□□□□ -0.81
VPS29-201ENST00000360579 CBX5P45973 191 aa9.97□□□□□ -0.81
VPS29-201ENST00000360579 ZNF600Q6ZNG1 722 aa9.97□□□□□ -0.81
VPS29-201ENST00000360579 LILRB2Q8N423 598 aa9.97□□□□□ -0.81
VPS29-201ENST00000360579 LGALS14Q8TCE9 139 aa9.97□□□□□ -0.81
VPS29-201ENST00000360579 PINX1Q96BK5 328 aaKnown RBP9.97□□□□□ -0.81
VPS29-201ENST00000360579 MOB3AQ96BX8 217 aa9.97□□□□□ -0.81
VPS29-201ENST00000360579 CELA1Q9UNI1 258 aa9.97□□□□□ -0.81
VPS29-201ENST00000360579 PUS1Q9Y606 427 aaKnown RBP eCLIP9.97□□□□□ -0.81
VPS29-201ENST00000360579 IGHV3-66A0A0C4DH42 116 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 K7EQG2 157 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 NPPCP23582 126 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 FGF9P31371 208 aaPredicted RBP9.96□□□□□ -0.82
VPS29-201ENST00000360579 SCAND1P57086 179 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 KCTD21Q4G0X4 260 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 SFXN4Q6P4A7 337 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 ZNF575Q86XF7 245 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 UBE2DNLQ8IWF7 75 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 CSNK1G2-AS1Q8NCQ2 148 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 STXBP6Q8NFX7 210 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 FAM210BQ96KR6 192 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 C1QTNF4Q9BXJ3 329 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 BLOC1S6Q9UL45 172 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 LRP1BQ9NZR2 4599 aa9.96□□□□□ -0.82
VPS29-201ENST00000360579 A6NJY4 79 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 DBX1A6NMT0 343 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 IGHV3-48P01763 117 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 CD74P04233 296 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 ZNF688P0C7X2 276 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 NUTF2P61970 127 aaKnown RBP9.95□□□□□ -0.82
VPS29-201ENST00000360579 ERHP84090 104 aaKnown RBP9.95□□□□□ -0.82
VPS29-201ENST00000360579 PRCDQ00LT1 54 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 ACTL10Q5JWF8 245 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 DHRS11Q6UWP2 260 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 Q6ZR54 194 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 ZNF767PQ75MW2 155 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 OR4A16Q8NH70 328 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 NARS2Q96I59 477 aaKnown RBP9.95□□□□□ -0.82
VPS29-201ENST00000360579 METTL26Q96S19 204 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 CLEC5AQ9NY25 188 aa9.95□□□□□ -0.82
VPS29-201ENST00000360579 RRP15Q9Y3B9 282 aaKnown RBP9.95□□□□□ -0.82
VPS29-201ENST00000360579 KNCNA6PVL3 124 aa9.94□□□□□ -0.82
VPS29-201ENST00000360579 SCGB2A1O75556 95 aa9.94□□□□□ -0.82
VPS29-201ENST00000360579 EIF2B2P49770 351 aaKnown RBP9.94□□□□□ -0.82
VPS29-201ENST00000360579 AQP4P55087 323 aa9.94□□□□□ -0.82
VPS29-201ENST00000360579 AUNIPQ9H7T9 357 aa9.94□□□□□ -0.82
VPS29-201ENST00000360579 DIABLOQ9NR28 239 aa9.94□□□□□ -0.82
VPS29-201ENST00000360579 FAM212BQ9NTI7 297 aaPredicted RBP9.94□□□□□ -0.82
VPS29-201ENST00000360579 TXNL4BQ9NX01 149 aaKnown RBP9.94□□□□□ -0.82
VPS29-201ENST00000360579 EHFQ9NZC4 300 aa9.94□□□□□ -0.82
VPS29-201ENST00000360579 IGLV2-18A0A075B6J9 118 aa9.93□□□□□ -0.82
VPS29-201ENST00000360579 GPR31O00270 319 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms