RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TPRX1Q8N7U7 411 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 COQ2Q96H96 371 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 TNFSF13O75888 250 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 VKORC1Q9BQB6 163 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 RPP21Q9H633 154 aaKnown RBP11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 MED12LQ86YW9 2145 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 ERVK11-1P61568 191 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 CALYQ9NYX4 217 aa11.25□□□□□ -0.61
SRGAP3-201ENST00000360413 DPM2O94777 84 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 ZNF48Q96MX3 618 aaPredicted RBP11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 CGAP01215 116 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 TRGV3P03979 118 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 MRPL52Q86TS9 123 aaKnown RBP11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 DNAJC30Q96LL9 226 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 NCOR1P1Q9H4R4 102 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 GAGE12BA1L429 117 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 CD69Q07108 199 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 M0R381 172 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 PPBPP02775 128 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 OR10J3Q5JRS4 329 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 PNKDQ8N490 385 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 EPDR1Q9UM22 224 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 USF3Q68DE3 2245 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 DUSP14O95147 198 aaKnown RBP11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 CT83Q5H943 113 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 OR2H2O95918 312 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 IGFBP6P24592 240 aaPredicted RBP11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 ATXN8Q156A1 80 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 CST9LQ9H4G1 147 aa11.24□□□□□ -0.61
SRGAP3-201ENST00000360413 TMEM54Q969K7 222 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 CCL13Q99616 98 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 CD200R1LQ6Q8B3 271 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 HEPN1Q6WQI6 88 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 STHQ8IWL8 128 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 OSR1Q8TAX0 266 aaPredicted RBP11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 CACNG8Q8WXS5 425 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 SAA1P0DJI8 122 aaPredicted RBP11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 ORMDL2Q53FV1 153 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 ABHD12Q8N2K0 398 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 MUC21A0A0G2JKD1 596 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 MUC21A0A140T8X8 626 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 MUC21Q5SSG8 566 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 HIST3H2BBQ8N257 126 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 TRAV24A0A0B4J272 114 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 RPL32P62910 135 aaKnown RBP11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 UCN2Q96RP3 112 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 SELENOKQ9Y6D0 94 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 TRAV2A0A0B4J234 112 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 PSG1P11464 419 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 GZMMP51124 257 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 SRSF3P84103 164 aaKnown RBP11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 GFI1BQ5VTD9 330 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 FAM181AQ8N9Y4 354 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 SHANK3Q9BYB0 1731 aa11.23□□□□□ -0.61
SRGAP3-201ENST00000360413 HELZP42694 1942 aaKnown RBP11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 TMEM167AQ8TBQ9 72 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 IGHV3-72A0A0B4J1Y9 119 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 APOBEC3AP31941 199 aaPredicted RBP11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 RPL23P62829 140 aaKnown RBP11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 TOMM7Q9P0U1 55 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 IGHV1-69-2A0A0G2JMI3 117 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 ITLN2Q8WWU7 325 aaPredicted RBP11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 ZIC1Q15915 447 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 GLRX5Q86SX6 157 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 FAM90A1Q86YD7 464 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 UBE2DNLQ8IWF7 75 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 LINC01587Q99440 93 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 ZIC4Q8N9L1 334 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 MRAPQ8TCY5 172 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 NPIPB13A6NJU9 1138 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 Q6ZS52 159 aa11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 RNASE7Q9H1E1 156 aaKnown RBP11.22□□□□□ -0.61
SRGAP3-201ENST00000360413 IGHV3-48P01763 117 aa11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 C1orf122Q6ZSJ8 110 aa11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 VN1R4Q7Z5H5 301 aa11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 SPRED2Q7Z698 418 aa11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 KCNK17Q96T54 332 aa11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 PKIGQ9Y2B9 76 aa11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 HRKO00198 91 aa11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 ICAM4Q14773 271 aa11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 FAM168AQ92567 244 aa11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 NAA38Q9BRA0 125 aaKnown RBP11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 JPT2Q9H910 190 aa11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 SLC50A1Q9BRV3 221 aa11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 CCL3P10147 92 aa11.21□□□□□ -0.61
SRGAP3-201ENST00000360413 C9JCJ5 164 aa11.21□□□□□ -0.62
SRGAP3-201ENST00000360413 MSGN1A6NI15 193 aa11.21□□□□□ -0.62
SRGAP3-201ENST00000360413 ATP5G3P48201 142 aa11.21□□□□□ -0.62
SRGAP3-201ENST00000360413 TRGV11A0A075B6L2 103 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 C1orf53Q5VUE5 145 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 MED13Q9UHV7 2174 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 UPK2O00526 184 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 IGKCP01834 107 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 GNB1LQ9BYB4 327 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 SBF2Q86WG5 1849 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 SIPA1L3O60292 1781 aaPredicted RBP11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 C1orf194Q5T5A4 169 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 ZAR1Q86SH2 424 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 NRXN3Q9Y4C0 1643 aa11.2□□□□□ -0.62
SRGAP3-201ENST00000360413 C1QAP02745 245 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms