RNA–Protein interactions for RNA: ENST00000360238.6

CUEDC1-201, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CUEDC1, Length 2,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-201ENST00000360238 OR10G8Q8NGN5 311 aa21.35■■□□□ 1.01
CUEDC1-201ENST00000360238 IGHV1-69-2A0A0G2JMI3 117 aa21.34■■□□□ 1.01
CUEDC1-201ENST00000360238 RPL15P61313 204 aaKnown RBP21.34■■□□□ 1.01
CUEDC1-201ENST00000360238 SGMS2Q8NHU3 365 aa21.34■■□□□ 1.01
CUEDC1-201ENST00000360238 RNASEH2CQ8TDP1 164 aaKnown RBP21.34■■□□□ 1.01
CUEDC1-201ENST00000360238 PFDN5Q99471 154 aa21.34■■□□□ 1.01
CUEDC1-201ENST00000360238 B9A039 149 aa21.34■■□□□ 1.01
CUEDC1-201ENST00000360238 IGHV1-8P0DP01 117 aa21.34■■□□□ 1.01
CUEDC1-201ENST00000360238 MC5RP33032 325 aa21.34■■□□□ 1.01
CUEDC1-201ENST00000360238 MRPL32Q9BYC8 188 aaKnown RBP21.34■■□□□ 1.01
CUEDC1-201ENST00000360238 TRBV23-1A0A0A0MS06 115 aa21.33■■□□□ 1.01
CUEDC1-201ENST00000360238 A0A0U1RQK1 487 aa21.33■■□□□ 1.01
CUEDC1-201ENST00000360238 ZNF320A2RRD8 509 aa21.33■■□□□ 1.01
CUEDC1-201ENST00000360238 ZNF503Q96F45 646 aa21.33■■□□□ 1.01
CUEDC1-201ENST00000360238 RNF2Q99496 336 aa21.33■■□□□ 1.01
CUEDC1-201ENST00000360238 PKDREJQ9NTG1 2253 aa21.33■■□□□ 1.01
CUEDC1-201ENST00000360238 HIST1H1BP16401 226 aaKnown RBP21.33■■□□□ 1
CUEDC1-201ENST00000360238 GATA2P23769 480 aaPredicted RBP21.33■■□□□ 1
CUEDC1-201ENST00000360238 MLANAQ16655 118 aa21.33■■□□□ 1
CUEDC1-201ENST00000360238 ZNF430Q9H8G1 570 aaPredicted RBP21.33■■□□□ 1
CUEDC1-201ENST00000360238 TRAV9-1A0A075B6T8 112 aa21.32■■□□□ 1
CUEDC1-201ENST00000360238 CGB1A6NKQ9 187 aa21.32■■□□□ 1
CUEDC1-201ENST00000360238 E7EUB6 86 aa21.32■■□□□ 1
CUEDC1-201ENST00000360238 CD3EP07766 207 aa21.32■■□□□ 1
CUEDC1-201ENST00000360238 VMA21Q3ZAQ7 101 aa21.32■■□□□ 1
CUEDC1-201ENST00000360238 CDPF1Q6NVV7 123 aa21.32■■□□□ 1
CUEDC1-201ENST00000360238 SCNM1Q9BWG6 230 aa21.32■■□□□ 1
CUEDC1-201ENST00000360238 K7EN84 100 aa21.31■■□□□ 1
CUEDC1-201ENST00000360238 COL8A2P25067 703 aa21.31■■□□□ 1
CUEDC1-201ENST00000360238 SUB1P53999 127 aaKnown RBP eCLIP21.31■■□□□ 1
CUEDC1-201ENST00000360238 WT1-ASQ06250 92 aa21.31■■□□□ 1
CUEDC1-201ENST00000360238 TMEM37Q8WXS4 190 aa21.31■■□□□ 1
CUEDC1-201ENST00000360238 EAF1Q96JC9 268 aaPredicted RBP21.31■■□□□ 1
CUEDC1-201ENST00000360238 PIEZO2Q9H5I5 2752 aa21.31■■□□□ 1
CUEDC1-201ENST00000360238 OR7C2O60412 319 aa21.31■■□□□ 1
CUEDC1-201ENST00000360238 AMBPP02760 352 aa21.31■■□□□ 1
CUEDC1-201ENST00000360238 TMEM133Q9H2Q1 129 aa21.31■■□□□ 1
CUEDC1-201ENST00000360238 PSMB11A5LHX3 300 aa21.3■■□□□ 1
CUEDC1-201ENST00000360238 C8orf88P0DMB2 117 aa21.3■■□□□ 1
CUEDC1-201ENST00000360238 TNFRSF14Q92956 283 aa21.3■■□□□ 1
CUEDC1-201ENST00000360238 SLC25A33Q9BSK2 321 aa21.3■■□□□ 1
CUEDC1-201ENST00000360238 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP21.3■■□□□ 1
CUEDC1-201ENST00000360238 HNF1AP20823 631 aa21.3■■□□□ 1
CUEDC1-201ENST00000360238 C11orf42Q8N5U0 333 aa21.29■■□□□ 1
CUEDC1-201ENST00000360238 OR2T6Q8NHC8 308 aa21.29■■□□□ 1
CUEDC1-201ENST00000360238 IL36BQ9NZH7 164 aa21.29■■□□□ 1
CUEDC1-201ENST00000360238 TRAPPC1Q9Y5R8 145 aa21.29■■□□□ 1
CUEDC1-201ENST00000360238 A0A1W2PRE2 83 aa21.29■■□□□ 1
CUEDC1-201ENST00000360238 LGALS7P47929 136 aa21.29■■□□□ 1
CUEDC1-201ENST00000360238 CNN1P51911 297 aaKnown RBP21.29■■□□□ 1
CUEDC1-201ENST00000360238 C10orf55Q5SWW7 151 aa21.29■■□□□ 1
CUEDC1-201ENST00000360238 PRDM13Q9H4Q3 707 aa21.29■■□□□ 1
CUEDC1-201ENST00000360238 SSX2Q16385 188 aa21.28■■□□□ 1
CUEDC1-201ENST00000360238 POLEQ07864 2286 aa21.28■■□□□ 1
CUEDC1-201ENST00000360238 SLC25A17O43808 307 aa21.27■■□□□ 1
CUEDC1-201ENST00000360238 FAM87AP0C7U9 286 aa21.27■■□□□ 1
CUEDC1-201ENST00000360238 OR5R1Q8NH85 324 aa21.27■■□□□ 1
CUEDC1-201ENST00000360238 GNG4P50150 75 aa21.27■■□□□ 1
CUEDC1-201ENST00000360238 FNDC4Q9H6D8 234 aaPredicted RBP21.27■■□□□ 1
CUEDC1-201ENST00000360238 DMXL2Q8TDJ6 3036 aa21.27■□□□□ 0.99
CUEDC1-201ENST00000360238 SMG1Q96Q15 3661 aaKnown RBP21.27■□□□□ 0.99
CUEDC1-201ENST00000360238 HELTA6NFD8 242 aa21.26■□□□□ 0.99
CUEDC1-201ENST00000360238 GGTLC3B5MD39 225 aa21.26■□□□□ 0.99
CUEDC1-201ENST00000360238 CRYBB3P26998 211 aa21.26■□□□□ 0.99
CUEDC1-201ENST00000360238 PPOXP50336 477 aa21.26■□□□□ 0.99
CUEDC1-201ENST00000360238 CENPWQ5EE01 88 aa21.26■□□□□ 0.99
CUEDC1-201ENST00000360238 THAP8Q8NA92 274 aa21.26■□□□□ 0.99
CUEDC1-201ENST00000360238 DNAJC4Q9NNZ3 241 aa21.26■□□□□ 0.99
CUEDC1-201ENST00000360238 FSTL3O95633 263 aa21.26■□□□□ 0.99
CUEDC1-201ENST00000360238 YPEL3P61236 119 aaPredicted RBP21.26■□□□□ 0.99
CUEDC1-201ENST00000360238 RALYQ9UKM9 306 aaKnown RBP21.26■□□□□ 0.99
CUEDC1-201ENST00000360238 NAV3Q8IVL0 2385 aa21.25■□□□□ 0.99
CUEDC1-201ENST00000360238 TCRBV4S1A1TA0A5B7 111 aa21.25■□□□□ 0.99
CUEDC1-201ENST00000360238 JOSD1Q15040 202 aaPredicted RBP21.25■□□□□ 0.99
CUEDC1-201ENST00000360238 MRGPRG-AS1Q2M3A8 158 aa21.25■□□□□ 0.99
CUEDC1-201ENST00000360238 MRPL41Q8IXM3 137 aaKnown RBP21.25■□□□□ 0.99
CUEDC1-201ENST00000360238 OR1L4Q8NGR5 311 aa21.25■□□□□ 0.99
CUEDC1-201ENST00000360238 FAM167A-AS1Q96KT0 104 aa21.25■□□□□ 0.99
CUEDC1-201ENST00000360238 SLC25A2Q9BXI2 301 aa21.25■□□□□ 0.99
CUEDC1-201ENST00000360238 SPTBN2O15020 2390 aa21.25■□□□□ 0.99
CUEDC1-201ENST00000360238 A0A1W2PPI3 338 aa21.24■□□□□ 0.99
CUEDC1-201ENST00000360238 OR10J4P0C629 311 aa21.24■□□□□ 0.99
CUEDC1-201ENST00000360238 TEX45Q8NA69 505 aa21.24■□□□□ 0.99
CUEDC1-201ENST00000360238 TPSG1Q9NRR2 321 aa21.24■□□□□ 0.99
CUEDC1-201ENST00000360238 TRAV20A0A0B4J274 112 aa21.24■□□□□ 0.99
CUEDC1-201ENST00000360238 CASP6P55212 293 aa21.24■□□□□ 0.99
CUEDC1-201ENST00000360238 SELENOTP62341 195 aa21.24■□□□□ 0.99
CUEDC1-201ENST00000360238 ZNF90Q03938 601 aa21.24■□□□□ 0.99
CUEDC1-201ENST00000360238 FBXL19-AS1Q494R0 122 aa21.24■□□□□ 0.99
CUEDC1-201ENST00000360238 IGHV2-26A0A0B4J1V2 119 aa21.23■□□□□ 0.99
CUEDC1-201ENST00000360238 BPIFB3P59826 476 aa21.23■□□□□ 0.99
CUEDC1-201ENST00000360238 PRSS8Q16651 343 aa21.23■□□□□ 0.99
CUEDC1-201ENST00000360238 COX7A2P2O60397 106 aa21.23■□□□□ 0.99
CUEDC1-201ENST00000360238 SSBP2P81877 361 aaPredicted RBP21.23■□□□□ 0.99
CUEDC1-201ENST00000360238 NPIPB3Q92617 1050 aa21.23■□□□□ 0.99
CUEDC1-201ENST00000360238 PTPRZ1P23471 2315 aaPredicted RBP21.22■□□□□ 0.99
CUEDC1-201ENST00000360238 PTPRQQ9UMZ3 2332 aa21.22■□□□□ 0.99
CUEDC1-201ENST00000360238 IGKV1D-37A0A075B6S9 117 aa21.22■□□□□ 0.99
CUEDC1-201ENST00000360238 PLAUP00749 431 aa21.22■□□□□ 0.99
CUEDC1-201ENST00000360238 IGLV1-47P01700 117 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms