RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 DPM3Q9P2X0 92 aa13.45□□□□□ -0.26
COL18A1-203ENST00000359759 EFEMP2O95967 443 aa13.45□□□□□ -0.26
COL18A1-203ENST00000359759 SEPSECSQ9HD40 501 aaKnown RBP13.45□□□□□ -0.26
COL18A1-203ENST00000359759 IGHV3-73A0A0B4J1V6 119 aa13.45□□□□□ -0.26
COL18A1-203ENST00000359759 C18orf12Q96KH6 178 aa13.45□□□□□ -0.26
COL18A1-203ENST00000359759 CFHR5Q9BXR6 569 aa13.45□□□□□ -0.26
COL18A1-203ENST00000359759 CECR9P0C854 216 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 ZNF415Q09FC8 603 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 A8MWV9 139 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 C3orf36Q3SXR2 165 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 TM2D1Q9BX74 207 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 MDC1Q14676 2089 aaKnown RBP13.44□□□□□ -0.26
COL18A1-203ENST00000359759 TRAV9-2A0A087WT02 112 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 A0A1B0GW15 77 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 HOXB1P14653 301 aaPredicted RBP13.44□□□□□ -0.26
COL18A1-203ENST00000359759 CD33P20138 364 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 TMEM30BQ3MIR4 351 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 RIPPLY2Q5TAB7 128 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 GTSCR1Q86UQ5 136 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 PTPRZ1P23471 2315 aaPredicted RBP13.44□□□□□ -0.26
COL18A1-203ENST00000359759 KBTBD11-OT1A0A1B0GTJ5 212 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 COLCA1Q6ZS62 124 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 GGTLC3B5MD39 225 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 FDCSPQ8NFU4 85 aa13.44□□□□□ -0.26
COL18A1-203ENST00000359759 SAA2-SAA4A0A096LPE2 208 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 M0R2P5 195 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 SAA2P0DJI9 122 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-203ENST00000359759 ZNF703Q9H7S9 590 aaPredicted RBP13.43□□□□□ -0.26
COL18A1-203ENST00000359759 CRIM1Q9NZV1 1036 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 TDRD15B5MCY1 1934 aaKnown RBP13.43□□□□□ -0.26
COL18A1-203ENST00000359759 ZNF688P0C7X2 276 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 A0A0G2JMM0 328 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 A0A1W2PPB8 328 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 A0A1W2PRS3 328 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 FABP5P3A8MUU1 101 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 KIR3DP1A8MWS1 328 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 S100A7L2Q5SY68 101 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 Q6AWC8 147 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 NDUFAF3Q9BU61 184 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 YAE1D1Q9NRH1 226 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 A0A0G2JLM5 398 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 CCL3L1P16619 93 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 ZNF562Q6V9R5 426 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 GAGE13Q4V321 117 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 Q6ZT83 130 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 ZNF479Q96JC4 524 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 BRWD1Q9NSI6 2320 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 RGPD4Q7Z3J3 1758 aa13.43□□□□□ -0.26
COL18A1-203ENST00000359759 A0A0G2JK05 382 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 TMEM167AQ8TBQ9 72 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 TMEM249Q2WGJ8 235 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 ADARB2-AS1A8MUL3 147 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 PLPPR1Q8TBJ4 325 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 SAP25Q8TEE9 199 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 EDA2RQ9HAV5 297 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 QSER1Q2KHR3 1735 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 TRAV9-1A0A075B6T8 112 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 TRGV4A0A0C4DH28 118 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 EPDR1Q9UM22 224 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 UMODP07911 640 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 UCP1P25874 307 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 C11orf44Q8N8P7 122 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 CST9LQ9H4G1 147 aa13.42□□□□□ -0.26
COL18A1-203ENST00000359759 CKAP5Q14008 2032 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 TM4SF5O14894 197 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 CRPP02741 224 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 RNF126Q9BV68 326 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 VSIRQ9H7M9 311 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 USP54Q70EL1 1684 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 SMIM10L1P0DMW3 83 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 ATP5IP56385 69 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-203ENST00000359759 SMIM10Q96HG1 83 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 CYSLTR1Q9Y271 337 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 HIST1H2BKO60814 126 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 HIST1H2BJP06899 126 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 HIST1H2BOP23527 126 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 HIST1H2BBP33778 126 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 HIST1H2BDP58876 126 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 HIST1H2BCP62807 126 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 HIST2H2BEQ16778 126 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-203ENST00000359759 OCC1Q8TAD7 63 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 HIST1H2BHQ93079 126 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 HIST1H2BNQ99877 126 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 HIST1H2BMQ99879 126 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 TRIP12Q14669 1992 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-203ENST00000359759 ATXN8Q156A1 80 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 GAGE2EQ4V326 116 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 ZNF837Q96EG3 531 aaPredicted RBP13.41□□□□□ -0.26
COL18A1-203ENST00000359759 C7orf69Q9H7B7 122 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 GAGE2DQ9UEU5 116 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 OCIAD2Q56VL3 154 aa13.41□□□□□ -0.26
COL18A1-203ENST00000359759 TRAV5A0A0B4J249 113 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 IGKV1D-13A0A0B4J2D9 117 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 IGKV1-13P0DP09 117 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 ZFAND6Q6FIF0 208 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 ZNF436-AS1Q8NC38 126 aaPredicted RBP13.4□□□□□ -0.26
COL18A1-203ENST00000359759 LAMB2P55268 1798 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 CDKN1AP38936 164 aa13.4□□□□□ -0.26
COL18A1-203ENST00000359759 WFDC1Q9HC57 220 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms