RNA–Protein interactions for RNA: ENST00000358808.6

CLIP1-202, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CLIP1, Length 5,880 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-202ENST00000358808 NMBP08949 121 aa8.58□□□□□ -1.04
CLIP1-202ENST00000358808 GLRXP35754 106 aa8.58□□□□□ -1.04
CLIP1-202ENST00000358808 ATP5IP56385 69 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-202ENST00000358808 PSMG4Q5JS54 123 aa8.58□□□□□ -1.04
CLIP1-202ENST00000358808 ORMDL3Q8N138 153 aa8.58□□□□□ -1.04
CLIP1-202ENST00000358808 SPTBP11277 2137 aa8.58□□□□□ -1.04
CLIP1-202ENST00000358808 PLNP26678 52 aa8.58□□□□□ -1.04
CLIP1-202ENST00000358808 IGHV3-73A0A0B4J1V6 119 aa8.58□□□□□ -1.04
CLIP1-202ENST00000358808 GCM2O75603 506 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-202ENST00000358808 FAM181AQ8N9Y4 354 aa8.58□□□□□ -1.04
CLIP1-202ENST00000358808 C14orf144Q96I85 54 aa8.58□□□□□ -1.04
CLIP1-202ENST00000358808 CRIM1Q9NZV1 1036 aa8.58□□□□□ -1.04
CLIP1-202ENST00000358808 TDRD15B5MCY1 1934 aaKnown RBP8.58□□□□□ -1.04
CLIP1-202ENST00000358808 BRCA1P38398 1863 aaKnown RBP8.58□□□□□ -1.04
CLIP1-202ENST00000358808 CXorf65A6NEN9 183 aa8.58□□□□□ -1.04
CLIP1-202ENST00000358808 NBR2O15453 112 aa8.58□□□□□ -1.04
CLIP1-202ENST00000358808 MORN3Q6PF18 240 aaPredicted RBP8.58□□□□□ -1.04
CLIP1-202ENST00000358808 UNC13CQ8NB66 2214 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 RND3P61587 244 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 CTAG1AP78358 180 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 ATXN8Q156A1 80 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 SUMO4Q6EEV6 95 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 SSBP4Q9BWG4 385 aaPredicted RBP8.57□□□□□ -1.04
CLIP1-202ENST00000358808 M0R2P5 195 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 IGHV3-53P01767 116 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 SRSF4Q08170 494 aaKnown RBP8.57□□□□□ -1.04
CLIP1-202ENST00000358808 PUSL1Q8N0Z8 303 aaKnown RBP8.57□□□□□ -1.04
CLIP1-202ENST00000358808 SLC50A1Q9BRV3 221 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 ALPK2Q86TB3 2170 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 SCN3AQ9NY46 2000 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 ATG2BQ96BY7 2078 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 TRAV40A0A0B4J280 105 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 LY6DQ14210 128 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 DTX1Q86Y01 620 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 CYSLTR1Q9Y271 337 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 CHTOPQ9Y3Y2 248 aaKnown RBP8.57□□□□□ -1.04
CLIP1-202ENST00000358808 A0A1B0GV90 55 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 A0A1B0GW15 77 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 SRSF1Q07955 248 aaKnown RBP eCLIP8.57□□□□□ -1.04
CLIP1-202ENST00000358808 RCHY1Q96PM5 261 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 DERL1Q9BUN8 251 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 CACNA1IQ9P0X4 2223 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 CACNA1DQ01668 2161 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 SPSB2Q99619 263 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 ASCL2Q99929 193 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 LHFPL6Q9Y693 200 aa8.57□□□□□ -1.04
CLIP1-202ENST00000358808 SCN1AP35498 2009 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 SLC17A3O00476 420 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 THBDP07204 575 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 CECR9P0C854 216 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 C2orf68Q2NKX9 166 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 LURAP1LQ8IV03 231 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 TRIP12Q14669 1992 aaPredicted RBP8.56□□□□□ -1.04
CLIP1-202ENST00000358808 TRIP11Q15643 1979 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 FABP5P3A8MUU1 101 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 WNT2P09544 360 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 CD24P25063 80 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 RHOGP84095 191 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 Q6AWC8 147 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 RNASE6Q93091 150 aaKnown RBP8.56□□□□□ -1.04
CLIP1-202ENST00000358808 PGPEP1LA6NFU8 196 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 ORAOV1Q8WV07 137 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 SCN10AQ9Y5Y9 1956 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 TRGV1A0A0A0MS02 117 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 DDTP30046 118 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 GZMMP51124 257 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 IFITM2Q01629 132 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 HAPLN4Q86UW8 402 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 PILRAQ9UKJ1 303 aa8.56□□□□□ -1.04
CLIP1-202ENST00000358808 SCO2A0A1W2PP80 73 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 CYB5R2Q6BCY4 276 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-202ENST00000358808 VENTXO95231 258 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 LGALS1P09382 135 aaKnown RBP8.55□□□□□ -1.04
CLIP1-202ENST00000358808 EVI2AP22794 236 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 TFF3Q07654 80 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 OTORQ9NRC9 128 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 IL36BQ9NZH7 164 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 AKAP6Q13023 2319 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 AHCTF1Q8WYP5 2266 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 PPIFP30405 207 aaKnown RBP8.55□□□□□ -1.04
CLIP1-202ENST00000358808 GAGE2EQ4V326 116 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 AQP3Q92482 292 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 AMELYQ99218 206 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 ANAPC13Q9BS18 74 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 GAGE2DQ9UEU5 116 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 GVINP1Q7Z2Y8 2422 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 KBTBD11-OT1A0A1B0GTJ5 212 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 LHX2P50458 406 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 ZNF660Q6AZW8 331 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-202ENST00000358808 Q96M66 194 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 CLDN16Q9Y5I7 305 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 ZNF883P0CG24 379 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 TMEM187Q14656 261 aa8.55□□□□□ -1.04
CLIP1-202ENST00000358808 NHP2Q9NX24 153 aaKnown RBP8.55□□□□□ -1.04
CLIP1-202ENST00000358808 ZFC3H1O60293 1989 aaKnown RBP8.55□□□□□ -1.04
CLIP1-202ENST00000358808 FXYD7P58549 80 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 GNG5P63218 68 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 IMMP2LQ96T52 175 aa8.54□□□□□ -1.04
CLIP1-202ENST00000358808 TMEM126AQ9H061 195 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms