RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 TEX45Q8NA69 505 aa12.13□□□□□ -0.47
SLC6A20-202ENST00000358525 UQCR10Q9UDW1 63 aa12.13□□□□□ -0.47
SLC6A20-202ENST00000358525 IGHV3OR16-8A0A075B7F1 116 aa12.13□□□□□ -0.47
SLC6A20-202ENST00000358525 OR10W1Q8NGF6 305 aa12.13□□□□□ -0.47
SLC6A20-202ENST00000358525 WNT10AQ9GZT5 417 aa12.13□□□□□ -0.47
SLC6A20-202ENST00000358525 A0A1W2PS18 150 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 FAM90A9PA6NNJ1 464 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 HIST1H2BKO60814 126 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 HIST1H2BJP06899 126 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 FOLR2P14207 255 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 HIST1H2BOP23527 126 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 HIST1H2BBP33778 126 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 HIST1H2BDP58876 126 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 HIST1H2BCP62807 126 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 GNG5P63218 68 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 HIST2H2BEQ16778 126 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 HIST1H2BHQ93079 126 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 COQ2Q96H96 371 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 HIST1H2BNQ99877 126 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 HIST1H2BMQ99879 126 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 TMEM133Q9H2Q1 129 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 IGHV3-49A0A0A0MS15 119 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 IGHV3-66A0A0C4DH42 116 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 MLNRO43193 412 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 CXCL1P09341 107 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 A6NDN8 102 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 FOXI3A8MTJ6 420 aaPredicted RBP12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 ESPL1Q14674 2120 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 TRAV3A0A0B4J244 114 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 PYYP10082 97 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 ADCYAP1P18509 176 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 RPS20P60866 119 aaKnown RBP12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 EEF1AKMT3Q96AZ1 226 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 LINC00473A8K010 186 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 TIMP3P35625 211 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 Q6ZS49 121 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 DYNLRB2Q8TF09 96 aa12.12□□□□□ -0.47
SLC6A20-202ENST00000358525 NUP210Q8TEM1 1887 aaPredicted RBP12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 NPPCP23582 126 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 CD24P25063 80 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 PDLIM4P50479 330 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 LEMD1Q68G75 181 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 RPP25LQ8N5L8 163 aaKnown RBP12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 HERVK_113P61574 105 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 DGAT2L7PQ6IED9 249 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 Q9H3A6 140 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 FBXL7Q9UJT9 491 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 AUP1Q9Y679 476 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 CD69Q07108 199 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 Q6ZRM9 215 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 RPUSD1Q9UJJ7 312 aaKnown RBP12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 TCF21O43680 179 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 FOXH1O75593 365 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 TMEM14EPQ6UXP3 125 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 OCC1Q8TAD7 63 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 NEU4Q8WWR8 484 aaPredicted RBP12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 ARPC1AQ92747 370 aa12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 TBL2Q9Y4P3 447 aaKnown RBP12.11□□□□□ -0.47
SLC6A20-202ENST00000358525 IGKV1-6A0A0C4DH72 117 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 CDKN1AP38936 164 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 TMEM170AQ8WVE7 144 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 MAP1LC3AQ9H492 121 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 ZNF207O43670 478 aaKnown RBP12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 HLA-DRB1P01911 266 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 GGTLC1Q9BX51 225 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 C21orf62Q9NYP8 219 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 A0A1B0GW64 132 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 C2orf83Q53S99 150 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 REC114Q7Z4M0 266 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 C1QL4Q86Z23 238 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 RNASE6Q93091 150 aaKnown RBP12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 ANAPC10Q9UM13 185 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 TRAV1-1A0A0B4J248 108 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 ADMP35318 185 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 UQCRFS1P47985 274 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 SPACA3Q8IXA5 215 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 CCL19Q99731 98 aa12.1□□□□□ -0.47
SLC6A20-202ENST00000358525 MUC21A0A0G2JKD1 596 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 MUC21A0A140T8X8 626 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 UBE2CO00762 179 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 MUC21Q5SSG8 566 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 C10orf55Q5SWW7 151 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 SPATA31B1PQ5VZV4 182 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 COLCA1Q6ZS62 124 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 FMC1Q96HJ9 113 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 RPP21Q9H633 154 aaKnown RBP12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 CHODLQ9H9P2 273 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 A0A1B0GV90 55 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 TAS2R60P59551 318 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 EBLN2Q6P2I7 272 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 OR10AG1Q8NH19 301 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 LINC00587B1AMM8 73 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 SIAH2O43255 324 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 COX6B1P14854 86 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 SRSF9Q13242 221 aaKnown RBP eCLIP12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 RSPO1Q2MKA7 263 aaPredicted RBP12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 TCRBV4S1A1TA0A5B7 111 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 DPRXA6NFQ7 191 aa12.09□□□□□ -0.47
SLC6A20-202ENST00000358525 GPR183P32249 361 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms