RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 TMEM200BQ69YZ2 307 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 LYPD2Q6UXB3 125 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 CCL17Q92583 94 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 NEUROG1Q92886 237 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 PATZ1Q9HBE1 687 aaKnown RBP11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 FKBP11Q9NYL4 201 aa11.62□□□□□ -0.55
NIPAL3-203ENST00000358028 NDUFB3O43676 98 aa11.61□□□□□ -0.55
NIPAL3-203ENST00000358028 GOSR1O95249 250 aa11.61□□□□□ -0.55
NIPAL3-203ENST00000358028 CA2P00918 260 aa11.61□□□□□ -0.55
NIPAL3-203ENST00000358028 ATP5G3P48201 142 aa11.61□□□□□ -0.55
NIPAL3-203ENST00000358028 LRRC10Q5BKY1 277 aa11.61□□□□□ -0.55
NIPAL3-203ENST00000358028 ARSJQ5FYB0 599 aaPredicted RBP11.61□□□□□ -0.55
NIPAL3-203ENST00000358028 ACTL10Q5JWF8 245 aa11.61□□□□□ -0.55
NIPAL3-203ENST00000358028 NECAP1Q8NC96 275 aa11.61□□□□□ -0.55
NIPAL3-203ENST00000358028 H1FXQ92522 213 aaKnown RBP11.61□□□□□ -0.55
NIPAL3-203ENST00000358028 PCGF1Q9BSM1 259 aa11.61□□□□□ -0.55
NIPAL3-203ENST00000358028 YLPM1P49750 1951 aaKnown RBP11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 HIVEP1P15822 2718 aa11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 NDUFB4O95168 129 aa11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 PLAUP00749 431 aa11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 IGKV1-16P04430 117 aa11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 HIST1H1BP16401 226 aaKnown RBP11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 UBE2G2P60604 165 aa11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 PRCDQ00LT1 54 aa11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 FOXL1Q12952 345 aa11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 OR1P1Q8NH06 330 aa11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 RNASEH2CQ8TDP1 164 aaKnown RBP11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 C1orf159Q96HA4 380 aa11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 ELOVL1Q9BW60 279 aa11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 HINT2Q9BX68 163 aa11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 MRPL20Q9BYC9 149 aaKnown RBP11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 PLEKHA3Q9HB20 300 aa11.6□□□□□ -0.55
NIPAL3-203ENST00000358028 A0A1W2PPQ1 181 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 SRRM4A7MD48 611 aaKnown RBP11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 J3QR06 171 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 APOA2P02652 100 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 FABP4P15090 132 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 GCHFRP30047 84 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 PDLIM4P50479 330 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 PRR20EP86478 221 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 PRR20CP86479 221 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 PRR20DP86480 221 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 PRR20BP86481 221 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 PRR20AP86496 221 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 EFNB3Q15768 340 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 STPG3Q8N7X2 389 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 C11orf52Q96A22 123 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 PACRGQ96M98 296 aaPredicted RBP11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 HIST1H2BLQ99880 126 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 BET1LQ9NYM9 111 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 CTSZQ9UBR2 303 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 LY96Q9Y6Y9 160 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 F8P00451 2351 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 DVL1O14640 695 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 CD3EP07766 207 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 SAA1P0DJI8 122 aaPredicted RBP11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 AREGP15514 252 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 TMEM144Q7Z5S9 345 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 OR5B3Q8NH48 314 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 OR5R1Q8NH85 324 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 OSR1Q8TAX0 266 aaPredicted RBP11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 SLC35E1Q96K37 410 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 C19orf24Q9BVV8 132 aa11.59□□□□□ -0.55
NIPAL3-203ENST00000358028 TRAV9-1A0A075B6T8 112 aa11.58□□□□□ -0.56
NIPAL3-203ENST00000358028 TEX50A0A1B0GTY4 177 aa11.58□□□□□ -0.56
NIPAL3-203ENST00000358028 MDFIC2A0A1B0GVS7 189 aa11.58□□□□□ -0.56
NIPAL3-203ENST00000358028 APOBEC3AP31941 199 aaPredicted RBP11.58□□□□□ -0.56
NIPAL3-203ENST00000358028 SSX2Q16385 188 aa11.58□□□□□ -0.56
NIPAL3-203ENST00000358028 C2orf83Q53S99 150 aa11.58□□□□□ -0.56
NIPAL3-203ENST00000358028 PNKDQ8N490 385 aa11.58□□□□□ -0.56
NIPAL3-203ENST00000358028 C8orf31Q8N9H6 132 aa11.58□□□□□ -0.56
NIPAL3-203ENST00000358028 SSMEM1Q8WWF3 244 aa11.58□□□□□ -0.56
NIPAL3-203ENST00000358028 UHRF2Q96PU4 802 aa11.58□□□□□ -0.56
NIPAL3-203ENST00000358028 KAAG1Q9UBP8 84 aa11.58□□□□□ -0.56
NIPAL3-203ENST00000358028 MAP1AP78559 2803 aaPredicted RBP11.58□□□□□ -0.56
NIPAL3-203ENST00000358028 VPS13CQ709C8 3753 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 XKRY2A2RUG3 117 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 B9A039 149 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 H0YJW9 148 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 CHRNA7P36544 502 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 TMEM177Q53S58 311 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 PDZD11Q5EBL8 140 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 FAM71F2Q6NXP2 309 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 LINC00311Q8N616 119 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 OR5AN1Q8NGI8 311 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 OR1L8Q8NGR8 309 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 ZNF596Q8TC21 504 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 SFRP2Q96HF1 295 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 SLC45A2Q9UMX9 530 aa11.57□□□□□ -0.56
NIPAL3-203ENST00000358028 IGHV1-69-2A0A0G2JMI3 117 aa11.56□□□□□ -0.56
NIPAL3-203ENST00000358028 C9JCJ5 164 aa11.56□□□□□ -0.56
NIPAL3-203ENST00000358028 INS-IGF2F8WCM5 200 aa11.56□□□□□ -0.56
NIPAL3-203ENST00000358028 GATCO43716 136 aaKnown RBP11.56□□□□□ -0.56
NIPAL3-203ENST00000358028 DLX6P56179 175 aa11.56□□□□□ -0.56
NIPAL3-203ENST00000358028 FAM78BQ5VT40 261 aa11.56□□□□□ -0.56
NIPAL3-203ENST00000358028 HARBI1Q96MB7 349 aa11.56□□□□□ -0.56
NIPAL3-203ENST00000358028 UBTD1Q9HAC8 227 aa11.56□□□□□ -0.56
NIPAL3-203ENST00000358028 TMEM167BQ9NRX6 74 aa11.56□□□□□ -0.56
NIPAL3-203ENST00000358028 TRAV20A0A0B4J274 112 aa11.56□□□□□ -0.56
NIPAL3-203ENST00000358028 LINC00869P0C866 280 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms