RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 WNT2BQ93097 391 aa3.96□□□□□ -1.77
SYNE2-203ENST00000357395 CD27P26842 260 aa3.96□□□□□ -1.77
SYNE2-203ENST00000357395 GUSBP1Q15486 140 aa3.96□□□□□ -1.77
SYNE2-203ENST00000357395 LYZL2Q7Z4W2 148 aa3.96□□□□□ -1.77
SYNE2-203ENST00000357395 ZNF492Q9P255 531 aa3.96□□□□□ -1.77
SYNE2-203ENST00000357395 GLI3P10071 1580 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 ADM5C9JUS6 153 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 EBLN2Q6P2I7 272 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 NAPSAO96009 420 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 TEN1Q86WV5 123 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 SIRT4Q9Y6E7 314 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-203ENST00000357395 TDRD15B5MCY1 1934 aaKnown RBP3.96□□□□□ -1.78
SYNE2-203ENST00000357395 LTN1O94822 1766 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 SPSB3Q6PJ21 355 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 FGF8P55075 233 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-203ENST00000357395 TMEM108Q6UXF1 575 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 RSPO2Q6UXX9 243 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-203ENST00000357395 SPATA12Q7Z6I5 190 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 NXPH3O95157 252 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 PHF3Q92576 2039 aaKnown RBP3.96□□□□□ -1.78
SYNE2-203ENST00000357395 SPAG8Q99932 426 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-203ENST00000357395 Q6ZNB5 142 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 PLA2G3Q9NZ20 509 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 GATD1Q8NB37 220 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 MYMXA0A1B0GTQ4 84 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 A0A1W2PP55 124 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 ZNF815PA8K554 130 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 PGLYRP4Q96LB8 373 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 KCNK17Q96T54 332 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 PLAC1Q9HBJ0 212 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 VCYO14598 125 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 APOHP02749 345 aaPredicted RBP3.96□□□□□ -1.78
SYNE2-203ENST00000357395 SSPNQ14714 243 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 CDCP2Q5VXM1 449 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 CEND1Q8N111 149 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 RGPD5Q99666 1765 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 DNAJC25-GNG10A0A024R161 153 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 SMIM27A0A1W2PRY6 76 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 E9PQ18 207 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 FAM89BQ8N5H3 189 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 PRTN3P24158 256 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 THSD4Q6ZMP0 1018 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 GNB4Q9HAV0 340 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 CASP8AP2Q9UKL3 1982 aa3.96□□□□□ -1.78
SYNE2-203ENST00000357395 HOXD3P31249 432 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-203ENST00000357395 BVES-AS1Q5T3Y7 98 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 GVQW1Q8N7I0 195 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 VDAC2P45880 294 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-203ENST00000357395 RBMY1FQ15415 496 aaKnown RBP3.95□□□□□ -1.78
SYNE2-203ENST00000357395 LILRA1O75019 489 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 CFIP05156 583 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 RGPD8O14715 1765 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-203ENST00000357395 VWC2LB2RUY7 222 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 KLF4O43474 513 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 WNT2P09544 360 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 ZNF441Q8N8Z8 693 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 PLCH1Q4KWH8 1693 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 MARCH3Q86UD3 253 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 KLK2P20151 261 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 COLQQ9Y215 455 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-203ENST00000357395 TOPAZ1Q8N9V7 1692 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 TRBV20OR9-2A0A075B6H5 130 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 H0YGX0 51 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 SHISA5Q8N114 240 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 NRXN3Q9Y4C0 1643 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 CT55Q8WUE5 264 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 SONP18583 2426 aaKnown RBP3.95□□□□□ -1.78
SYNE2-203ENST00000357395 JMJD7-PLA2G4BH0Y9G9 81 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 PRDM6Q9NQX0 595 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 LOXL2Q9Y4K0 774 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 TRAV8-6A0A0B4J262 113 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 COL9A2Q14055 689 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-203ENST00000357395 FNDC4Q9H6D8 234 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-203ENST00000357395 RHODO00212 210 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 P2RY2P41231 377 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 UCNP55089 124 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 FAM157BP0CG42 384 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 A0A1B0GUL6 1792 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 ZNF646O15015 1829 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-203ENST00000357395 FAM182BQ5T319 152 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 FOXI2Q6ZQN5 318 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 LINC00643Q86TS7 51 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 HS3ST6Q96QI5 342 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 C21orf140B9A014 251 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 ZNF488Q96MN9 340 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 FOXA2Q9Y261 457 aaPredicted RBP3.95□□□□□ -1.78
SYNE2-203ENST00000357395 M0QXV9 152 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 CEACAM5P06731 702 aa3.95□□□□□ -1.78
SYNE2-203ENST00000357395 ADAMTSL5Q6ZMM2 481 aa3.94□□□□□ -1.78
SYNE2-203ENST00000357395 C2orf27AQ580R0 203 aa3.94□□□□□ -1.78
SYNE2-203ENST00000357395 C20orf78Q9BR46 151 aa3.94□□□□□ -1.78
SYNE2-203ENST00000357395 PRO1854Q9UHT4 67 aa3.94□□□□□ -1.78
SYNE2-203ENST00000357395 UPK3AO75631 287 aa3.94□□□□□ -1.78
SYNE2-203ENST00000357395 GRIFINA4D1Z8 144 aa3.94□□□□□ -1.78
SYNE2-203ENST00000357395 MLF2Q15773 248 aaPredicted RBP3.94□□□□□ -1.78
SYNE2-203ENST00000357395 TRGV9Q99603 122 aa3.94□□□□□ -1.78
SYNE2-203ENST00000357395 MYOFQ9NZM1 2061 aa3.94□□□□□ -1.78
SYNE2-203ENST00000357395 FABP5P3A8MUU1 101 aa3.94□□□□□ -1.78
SYNE2-203ENST00000357395 NDUFB8O95169 186 aa3.94□□□□□ -1.78
SYNE2-203ENST00000357395 NMSQ5H8A3 153 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms