RNA–Protein interactions for RNA: ENST00000355480.9

COL18A1-202, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL18A1, Length 5,924 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-202ENST00000355480 C15orf61A6NNL5 157 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 TIMM23O14925 209 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 PVRIGQ6DKI7 326 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 ZNF525Q8N782 197 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 FAM131CQ96AQ9 280 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 RNF125Q96EQ8 232 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 FLVCR1-AS1Q8TAF5 88 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 SLC50A1Q9BRV3 221 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 IGKV1D-13A0A0B4J2D9 117 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 TBX6O95947 436 aaPredicted RBP15.04■□□□□ -0
COL18A1-202ENST00000355480 IGKV1-13P0DP09 117 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 FOXF2Q12947 444 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 LEMD1Q68G75 181 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 Q6AWC8 147 aa15.04■□□□□ -0
COL18A1-202ENST00000355480 RTTNQ86VV8 2226 aa15.03■□□□□ -0
COL18A1-202ENST00000355480 DPRXA6NFQ7 191 aa15.03■□□□□ -0
COL18A1-202ENST00000355480 IMMP2LQ96T52 175 aa15.03■□□□□ -0
COL18A1-202ENST00000355480 IGHV1-46P01743 117 aa15.03■□□□□ -0
COL18A1-202ENST00000355480 CFHR1Q03591 330 aa15.03■□□□□ -0
COL18A1-202ENST00000355480 MESP1Q9BRJ9 268 aa15.03■□□□□ -0
COL18A1-202ENST00000355480 WNT2P09544 360 aa15.03■□□□□ -0
COL18A1-202ENST00000355480 SMIM13P0DJ93 91 aa15.03■□□□□ -0
COL18A1-202ENST00000355480 LINC00271P0C7V0 271 aa15.02■□□□□ -0
COL18A1-202ENST00000355480 MALP21145 153 aa15.02■□□□□ -0
COL18A1-202ENST00000355480 GNG5P63218 68 aa15.02■□□□□ -0
COL18A1-202ENST00000355480 TMEM183AQ8IXX5 376 aa15.02■□□□□ -0
COL18A1-202ENST00000355480 RBBP6Q7Z6E9 1792 aaKnown RBP15.02■□□□□ -0
COL18A1-202ENST00000355480 ZNF600Q6ZNG1 722 aa15.02■□□□□ -0
COL18A1-202ENST00000355480 OR5AN1Q8NGI8 311 aa15.02■□□□□ -0
COL18A1-202ENST00000355480 SOX21Q9Y651 276 aaPredicted RBP15.02■□□□□ -0
COL18A1-202ENST00000355480 A0A1B0GW15 77 aa15.02■□□□□ -0
COL18A1-202ENST00000355480 CNTFRP26992 372 aa15.02■□□□□ -0
COL18A1-202ENST00000355480 OR10J3Q5JRS4 329 aa15.02■□□□□ -0
COL18A1-202ENST00000355480 FABP5P3A8MUU1 101 aa15.02□□□□□ -0.01
COL18A1-202ENST00000355480 DUSP14O95147 198 aaKnown RBP15.02□□□□□ -0.01
COL18A1-202ENST00000355480 MRPL16Q9NX20 251 aaKnown RBP15.02□□□□□ -0.01
COL18A1-202ENST00000355480 RAMP3O60896 148 aa15.02□□□□□ -0.01
COL18A1-202ENST00000355480 DDTP30046 118 aa15.02□□□□□ -0.01
COL18A1-202ENST00000355480 ORMDL3Q8N138 153 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 TMEM50AO95807 157 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 GTSCR1Q86UQ5 136 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 LINC00527Q9UJ94 153 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 GVINP1Q7Z2Y8 2422 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 BRWD3Q6RI45 1802 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 EFNB1P98172 346 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 C3orf36Q3SXR2 165 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 ASCL2Q99929 193 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 PARD6GQ9BYG4 376 aaPredicted RBP15.01□□□□□ -0.01
COL18A1-202ENST00000355480 OR9G9P0C7N8 305 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 TTC9CQ8N5M4 171 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 PTPRFP10586 1907 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 IGKV1-9A0A0C4DH69 117 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 TMEM42Q69YG0 159 aa15.01□□□□□ -0.01
COL18A1-202ENST00000355480 SRP19P09132 144 aaKnown RBP15□□□□□ -0.01
COL18A1-202ENST00000355480 FBLN7Q53RD9 439 aa15□□□□□ -0.01
COL18A1-202ENST00000355480 JKAMPQ9P055 326 aa15□□□□□ -0.01
COL18A1-202ENST00000355480 IGKV3D-20A0A0C4DH25 116 aa15□□□□□ -0.01
COL18A1-202ENST00000355480 ZNF672Q499Z4 452 aaPredicted RBP15□□□□□ -0.01
COL18A1-202ENST00000355480 DSCR9P59020 149 aa15□□□□□ -0.01
COL18A1-202ENST00000355480 MTCL1Q9Y4B5 1905 aaKnown RBP15□□□□□ -0.01
COL18A1-202ENST00000355480 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15□□□□□ -0.01
COL18A1-202ENST00000355480 TIMP3P35625 211 aa15□□□□□ -0.01
COL18A1-202ENST00000355480 FGFBP3Q8TAT2 258 aa15□□□□□ -0.01
COL18A1-202ENST00000355480 C18orf12Q96KH6 178 aa15□□□□□ -0.01
COL18A1-202ENST00000355480 CACNA1EQ15878 2313 aa15□□□□□ -0.01
COL18A1-202ENST00000355480 SDHCQ99643 169 aaPredicted RBP14.99□□□□□ -0.01
COL18A1-202ENST00000355480 HIGD1CA8MV81 97 aa14.99□□□□□ -0.01
COL18A1-202ENST00000355480 C1QTNF9BB2RNN3 333 aa14.99□□□□□ -0.01
COL18A1-202ENST00000355480 NDUFA3O95167 84 aa14.99□□□□□ -0.01
COL18A1-202ENST00000355480 ZNF585BQ52M93 769 aa14.99□□□□□ -0.01
COL18A1-202ENST00000355480 TCF23Q7RTU1 214 aa14.99□□□□□ -0.01
COL18A1-202ENST00000355480 TBL2Q9Y4P3 447 aaKnown RBP14.99□□□□□ -0.01
COL18A1-202ENST00000355480 TRGV4A0A0C4DH28 118 aa14.99□□□□□ -0.01
COL18A1-202ENST00000355480 TRBV7-9A0A0J9YWB2 115 aa14.99□□□□□ -0.01
COL18A1-202ENST00000355480 SNAI2O43623 268 aa14.99□□□□□ -0.01
COL18A1-202ENST00000355480 IZUMO1RA6ND01 250 aa14.99□□□□□ -0.01
COL18A1-202ENST00000355480 CCL1P22362 96 aa14.99□□□□□ -0.01
COL18A1-202ENST00000355480 NUDT11Q96G61 164 aa14.99□□□□□ -0.01
COL18A1-202ENST00000355480 OTOFQ9HC10 1997 aa14.99□□□□□ -0.01
COL18A1-202ENST00000355480 ST20Q9HBF5 79 aa14.98□□□□□ -0.01
COL18A1-202ENST00000355480 SRD5A1P18405 259 aa14.98□□□□□ -0.01
COL18A1-202ENST00000355480 IFITM2Q01629 132 aa14.98□□□□□ -0.01
COL18A1-202ENST00000355480 TTC32Q5I0X7 151 aa14.98□□□□□ -0.01
COL18A1-202ENST00000355480 HEATR5BQ9P2D3 2071 aa14.98□□□□□ -0.01
COL18A1-202ENST00000355480 PAX8Q06710 450 aa14.98□□□□□ -0.01
COL18A1-202ENST00000355480 C21orf62-AS1Q17RA5 79 aa14.98□□□□□ -0.01
COL18A1-202ENST00000355480 TRAV21A0A0B4J279 112 aa14.98□□□□□ -0.01
COL18A1-202ENST00000355480 FAM209BQ5JX69 171 aa14.98□□□□□ -0.01
COL18A1-202ENST00000355480 GNLYP22749 145 aa14.98□□□□□ -0.01
COL18A1-202ENST00000355480 EFNA4P52798 201 aa14.98□□□□□ -0.01
COL18A1-202ENST00000355480 PLXNA1Q9UIW2 1896 aa14.97□□□□□ -0.01
COL18A1-202ENST00000355480 ESPL1Q14674 2120 aa14.97□□□□□ -0.01
COL18A1-202ENST00000355480 TSPAN13O95857 204 aa14.97□□□□□ -0.01
COL18A1-202ENST00000355480 NEUROG1Q92886 237 aa14.97□□□□□ -0.01
COL18A1-202ENST00000355480 PYYP10082 97 aa14.97□□□□□ -0.01
COL18A1-202ENST00000355480 CD55P08174 381 aa14.97□□□□□ -0.01
COL18A1-202ENST00000355480 WFDC12Q8WWY7 111 aa14.97□□□□□ -0.01
COL18A1-202ENST00000355480 ZNF319Q9P2F9 582 aa14.97□□□□□ -0.01
COL18A1-202ENST00000355480 TRAV41A0A0B4J266 112 aa14.97□□□□□ -0.01
COL18A1-202ENST00000355480 CD33P20138 364 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms