RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 Q8TAT8 98 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 ZNF596Q8TC21 504 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 VN1R17PQ8TDU5 208 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 BCL2L2Q92843 193 aaPredicted RBP4.4□□□□□ -1.7
CD47-201ENST00000355354 NPCDR1Q9BY65 106 aa4.4□□□□□ -1.7
CD47-201ENST00000355354 VDAC1P21796 283 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 RAB4BP61018 213 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 RAB14P61106 215 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 RBX1P62877 108 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 Q6ZSV7 163 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 CENPVQ7Z7K6 275 aaPredicted RBP4.4□□□□□ -1.71
CD47-201ENST00000355354 MKXQ8IYA7 352 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 Q8N1Y9 231 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 BORCS8Q96FH0 119 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 POLE3Q9NRF9 147 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 COPS7AQ9UBW8 275 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 SYNGR2O43760 224 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 FCGR3BO75015 233 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 DFFBO76075 338 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 CRYABP02511 175 aaKnown RBP4.4□□□□□ -1.71
CD47-201ENST00000355354 CAMLGP49069 296 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 MEF2BQ02080 365 aaPredicted RBP4.4□□□□□ -1.71
CD47-201ENST00000355354 PAX5Q02548 391 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 TNXAQ16473 311 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 SFTA2Q6UW10 78 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 PHYHIPLQ96FC7 376 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 CMTM3Q96MX0 182 aa4.4□□□□□ -1.71
CD47-201ENST00000355354 LOC102725191A0A1B0GVB3 256 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 ZNF705FA8MVS1 300 aaPredicted RBP4.39□□□□□ -1.71
CD47-201ENST00000355354 RND2P52198 227 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 FLI1Q01543 452 aaPredicted RBP4.39□□□□□ -1.71
CD47-201ENST00000355354 PTX4Q96A99 478 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 JMJD8Q96S16 334 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 HINT2Q9BX68 163 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 TOLLIPQ9H0E2 274 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 ELOVL5Q9NYP7 299 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 NDRG3Q9UGV2 375 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 SAA2-SAA4A0A096LPE2 208 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 SAA2P0DJI9 122 aaPredicted RBP4.39□□□□□ -1.71
CD47-201ENST00000355354 GATA3P23771 443 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 GUCA1AP43080 201 aaPredicted RBP4.39□□□□□ -1.71
CD47-201ENST00000355354 PSMD4P55036 377 aaKnown RBP4.39□□□□□ -1.71
CD47-201ENST00000355354 MUC15Q8N387 334 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 OR6C3Q9NZP0 311 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 V9GYV3 84 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 IGHV3-66A0A0C4DH42 116 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 H7BYZ3 331 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 SPRY3O43610 288 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 IGLV2-11P01706 119 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 DOK3Q7L591 496 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 TRAV8-6A0A0B4J262 113 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 NAP1L6A6NFF2 107 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 TRBV12-3P01733 135 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 SUMO1P63165 101 aaKnown RBP4.39□□□□□ -1.71
CD47-201ENST00000355354 CEACAM21Q3KPI0 293 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 OR8I2Q8N0Y5 310 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 SMR3AQ99954 134 aa4.39□□□□□ -1.71
CD47-201ENST00000355354 APOC1P02654 83 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 SEC11BP0C7V7 166 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 CT45A6P0DMU7 189 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 CT45A5P0DMU8 189 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 CT45A7P0DMV0 189 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 MDH2P40926 338 aaKnown RBP4.38□□□□□ -1.71
CD47-201ENST00000355354 ARL11Q969Q4 196 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 JPT2Q9H910 190 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 IGLV3-9A0A075B6K5 115 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 AVPP01185 164 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 BCL2P10415 239 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 MEOX1P50221 254 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 AJUBAQ96IF1 538 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 GCM1Q9NP62 436 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 OR2W1Q9Y3N9 320 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 MAP1LC3B2A6NCE7 125 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 FSHBP01225 129 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 GYPAP02724 150 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 ZNF41P51814 821 aaPredicted RBP4.38□□□□□ -1.71
CD47-201ENST00000355354 ZNF137PP52743 207 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 UBE2KP61086 200 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 LRRC75BQ2VPJ9 315 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 WFDC11Q8NEX6 87 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 LINC00477Q96M19 166 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 MAP1LC3BQ9GZQ8 125 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 MANBALQ9NQG1 85 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 HSPB7Q9UBY9 170 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 IGKV3-15P01624 115 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 FOLR2P14207 255 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 JOSD1Q15040 202 aaPredicted RBP4.38□□□□□ -1.71
CD47-201ENST00000355354 ANKRD39Q53RE8 183 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 FAM58AQ8N1B3 248 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 PFDN5Q99471 154 aa4.38□□□□□ -1.71
CD47-201ENST00000355354 BEX4Q9NWD9 120 aaPredicted RBP4.38□□□□□ -1.71
CD47-201ENST00000355354 TAAR5O14804 337 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 C3orf79P0CE67 100 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 SRSF9Q13242 221 aaKnown RBP eCLIP4.37□□□□□ -1.71
CD47-201ENST00000355354 MORN2Q502X0 79 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 PRR9Q5T870 116 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 COMMD1Q8N668 190 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 OR13D1Q8NGV5 346 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 PITPNC1Q9UKF7 332 aa4.37□□□□□ -1.71
CD47-201ENST00000355354 LRRC30A6NM36 301 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms