RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 IGHV2OR16-5A0A0B4J2B6 119 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 CGB7P0DN87 165 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 MEF2BQ02080 365 aaPredicted RBP8.41□□□□□ -1.06
COL11A1-201ENST00000353414 ACTL10Q5JWF8 245 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 Q6ZT83 130 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 MIR17HGQ75NE6 70 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 Q9H3A6 140 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 EDA2RQ9HAV5 297 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 NBEAP1P0C6P0 100 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 OR11H4Q8NGC9 324 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 FAM57AQ8TBR7 257 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 JPT1Q9UK76 154 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 CLPSP04118 112 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 SLC25A28Q96A46 364 aa8.41□□□□□ -1.06
COL11A1-201ENST00000353414 C7orf66A4D0T2 115 aa8.4□□□□□ -1.06
COL11A1-201ENST00000353414 TMEM50AO95807 157 aa8.4□□□□□ -1.06
COL11A1-201ENST00000353414 GATA4P43694 442 aa8.4□□□□□ -1.06
COL11A1-201ENST00000353414 TNFSF18Q9UNG2 199 aa8.4□□□□□ -1.06
COL11A1-201ENST00000353414 ANK1P16157 1881 aa8.4□□□□□ -1.06
COL11A1-201ENST00000353414 LCNL1Q6ZST4 164 aa8.4□□□□□ -1.06
COL11A1-201ENST00000353414 NEU4Q8WWR8 484 aaPredicted RBP8.4□□□□□ -1.06
COL11A1-201ENST00000353414 DOPEY2Q9Y3R5 2298 aa8.4□□□□□ -1.06
COL11A1-201ENST00000353414 TRAV14DV4A0A0A6YYC5 116 aa8.4□□□□□ -1.06
COL11A1-201ENST00000353414 TRAV8-4A0A0B4J246 113 aa8.4□□□□□ -1.06
COL11A1-201ENST00000353414 RPL15P61313 204 aaKnown RBP8.4□□□□□ -1.06
COL11A1-201ENST00000353414 ZNF474Q6S9Z5 364 aaPredicted RBP8.4□□□□□ -1.06
COL11A1-201ENST00000353414 RHOGP84095 191 aa8.4□□□□□ -1.07
COL11A1-201ENST00000353414 COX19Q49B96 90 aa8.4□□□□□ -1.07
COL11A1-201ENST00000353414 IL17RELQ6ZVW7 336 aa8.4□□□□□ -1.07
COL11A1-201ENST00000353414 VCX2Q9H322 139 aa8.4□□□□□ -1.07
COL11A1-201ENST00000353414 PTPRFP10586 1907 aa8.4□□□□□ -1.07
COL11A1-201ENST00000353414 NACAE9PAV3 2078 aa8.4□□□□□ -1.07
COL11A1-201ENST00000353414 H7C1H1 209 aa8.4□□□□□ -1.07
COL11A1-201ENST00000353414 CD28P10747 220 aa8.4□□□□□ -1.07
COL11A1-201ENST00000353414 TIMM23BQ5SRD1 257 aa8.4□□□□□ -1.07
COL11A1-201ENST00000353414 UNQ6494/PRO21346Q6UXR6 183 aa8.4□□□□□ -1.07
COL11A1-201ENST00000353414 MTURNQ8N3F0 131 aa8.4□□□□□ -1.07
COL11A1-201ENST00000353414 PSME4Q14997 1843 aa8.4□□□□□ -1.07
COL11A1-201ENST00000353414 PLA2G10O15496 165 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 PTGDSP41222 190 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 FUT5Q11128 374 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 C5orf66Q9H5L9 145 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 PILRAQ9UKJ1 303 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 EGR4Q05215 589 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 VMO1Q7Z5L0 202 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 LINC00477Q96M19 166 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 C19orf24Q9BVV8 132 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 RNASE7Q9H1E1 156 aaKnown RBP8.39□□□□□ -1.07
COL11A1-201ENST00000353414 KMT2EQ8IZD2 1858 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 COL4A5P29400 1685 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 THBDP07204 575 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 IGFL4Q6B9Z1 124 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 ZIC4Q8N9L1 334 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 VKORC1Q9BQB6 163 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 GPR132Q9UNW8 380 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 ARFGEF3Q5TH69 2177 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 CD55P08174 381 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 ATP5G3P48201 142 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 SERF2P84101 59 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 C8orf82Q6P1X6 216 aaPredicted RBP8.39□□□□□ -1.07
COL11A1-201ENST00000353414 GGACTQ9BVM4 153 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 AICDAQ9GZX7 198 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 LOC285556D6RIA3 1793 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 HBDP02042 147 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 KLHL30-AS1Q8NEE0 82 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 TRGV1A0A0A0MS02 117 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 IGKV1D-43A0A0B4J1Z2 117 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 ANXA2RQ3ZCQ2 193 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 TCF23Q7RTU1 214 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 CFHR5Q9BXR6 569 aa8.39□□□□□ -1.07
COL11A1-201ENST00000353414 PEF1Q9UBV8 284 aaKnown RBP8.39□□□□□ -1.07
COL11A1-201ENST00000353414 IGKV2-40A0A087WW87 121 aaPredicted RBP8.38□□□□□ -1.07
COL11A1-201ENST00000353414 IGKV2D-40P01614 121 aaPredicted RBP8.38□□□□□ -1.07
COL11A1-201ENST00000353414 RND3P61587 244 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 FER1L6-AS1Q8NA97 138 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 FOXD3Q9UJU5 478 aaPredicted RBP8.38□□□□□ -1.07
COL11A1-201ENST00000353414 MAJINQ3KP22 176 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 MPTX1A8MV57 137 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 OR11H12B2RN74 326 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 H3BUT2 72 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 PRB1P04280 392 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 NIT1Q86X76 327 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 OR11H1Q8NG94 326 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 OR11H2Q8NH07 326 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 TMEM54Q969K7 222 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 SIPA1L3O60292 1781 aaPredicted RBP8.38□□□□□ -1.07
COL11A1-201ENST00000353414 ZDBF2Q9HCK1 2354 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.38□□□□□ -1.07
COL11A1-201ENST00000353414 TMEM250H0YL14 139 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 RAMP3O60896 148 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 SPRR3Q9UBC9 169 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 TET1Q8NFU7 2136 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 SDK2Q58EX2 2172 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 A0A087WX48 190 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 DEFB130BP0DP73 79 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 DEFB130AP0DP74 79 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 OR10W1Q8NGF6 305 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 OR52E5Q8NH55 327 aa8.38□□□□□ -1.07
COL11A1-201ENST00000353414 IGLV1-36A0A0B4J1U3 117 aa8.37□□□□□ -1.07
COL11A1-201ENST00000353414 FOXF2Q12947 444 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms