RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 JOSD1Q15040 202 aaPredicted RBP17.92■□□□□ 0.46
UPF3A-201ENST00000351487 MLANAQ16655 118 aa17.92■□□□□ 0.46
UPF3A-201ENST00000351487 HLA-DRB5Q30154 266 aa17.92■□□□□ 0.46
UPF3A-201ENST00000351487 TMEM155Q4W5P6 130 aa17.92■□□□□ 0.46
UPF3A-201ENST00000351487 WASHC3Q9Y3C0 194 aa17.92■□□□□ 0.46
UPF3A-201ENST00000351487 IGLV2-23P01705 113 aa17.92■□□□□ 0.46
UPF3A-201ENST00000351487 GATA2P23769 480 aaPredicted RBP17.92■□□□□ 0.46
UPF3A-201ENST00000351487 SPACA3Q8IXA5 215 aa17.92■□□□□ 0.46
UPF3A-201ENST00000351487 MRPL32Q9BYC8 188 aaKnown RBP17.92■□□□□ 0.46
UPF3A-201ENST00000351487 DYNLRB1Q9NP97 96 aa17.92■□□□□ 0.46
UPF3A-201ENST00000351487 TRAPPC1Q9Y5R8 145 aa17.92■□□□□ 0.46
UPF3A-201ENST00000351487 BSNQ9UPA5 3926 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 ARFGEF3Q5TH69 2177 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 PSMB11A5LHX3 300 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 E7EQL1 145 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 E7EUB6 86 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 DIAPH2-AS1Q14236 149 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 TBR1Q16650 682 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 TRBV23-1A0A0A0MS06 115 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 CGB1A6NKQ9 187 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 RD3LP0DJH9 198 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 HNF1AP20823 631 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 PRSS8Q16651 343 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 PRR30Q53SZ7 412 aaPredicted RBP17.91■□□□□ 0.46
UPF3A-201ENST00000351487 IL36BQ9NZH7 164 aa17.91■□□□□ 0.46
UPF3A-201ENST00000351487 PKDREJQ9NTG1 2253 aa17.9■□□□□ 0.46
UPF3A-201ENST00000351487 YPEL3P61236 119 aaPredicted RBP17.9■□□□□ 0.46
UPF3A-201ENST00000351487 FAM209BQ5JX69 171 aa17.9■□□□□ 0.46
UPF3A-201ENST00000351487 MUC6Q6W4X9 2439 aa17.9■□□□□ 0.46
UPF3A-201ENST00000351487 WT1-ASQ06250 92 aa17.9■□□□□ 0.46
UPF3A-201ENST00000351487 RNF2Q99496 336 aa17.9■□□□□ 0.46
UPF3A-201ENST00000351487 SLC25A33Q9BSK2 321 aa17.9■□□□□ 0.46
UPF3A-201ENST00000351487 OR7C2O60412 319 aa17.89■□□□□ 0.45
UPF3A-201ENST00000351487 C8orf88P0DMB2 117 aa17.89■□□□□ 0.45
UPF3A-201ENST00000351487 C9orf152Q5JTZ5 239 aa17.88■□□□□ 0.45
UPF3A-201ENST00000351487 TGIF2LXQ8IUE1 241 aa17.88■□□□□ 0.45
UPF3A-201ENST00000351487 ZNF430Q9H8G1 570 aaPredicted RBP17.88■□□□□ 0.45
UPF3A-201ENST00000351487 A0A1W2PRE2 83 aa17.88■□□□□ 0.45
UPF3A-201ENST00000351487 GGTLC3B5MD39 225 aa17.88■□□□□ 0.45
UPF3A-201ENST00000351487 IGHV1-8P0DP01 117 aa17.88■□□□□ 0.45
UPF3A-201ENST00000351487 GZMBP10144 247 aa17.88■□□□□ 0.45
UPF3A-201ENST00000351487 MC5RP33032 325 aa17.88■□□□□ 0.45
UPF3A-201ENST00000351487 HELTA6NFD8 242 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 CRYBB3P26998 211 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 RBPJQ06330 500 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 SSX2Q16385 188 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 CENPWQ5EE01 88 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 C10orf55Q5SWW7 151 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 C11orf42Q8N5U0 333 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 OR2T6Q8NHC8 308 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 TMEM18Q96B42 140 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 IGHV1-69-2A0A0G2JMI3 117 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 OR10J4P0C629 311 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 GNG4P50150 75 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 SUB1P53999 127 aaKnown RBP eCLIP17.87■□□□□ 0.45
UPF3A-201ENST00000351487 VMA21Q3ZAQ7 101 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 FAM167A-AS1Q96KT0 104 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 FNDC4Q9H6D8 234 aaPredicted RBP17.87■□□□□ 0.45
UPF3A-201ENST00000351487 ATMQ13315 3056 aa17.87■□□□□ 0.45
UPF3A-201ENST00000351487 NAV3Q8IVL0 2385 aa17.86■□□□□ 0.45
UPF3A-201ENST00000351487 K7ENP7 123 aa17.86■□□□□ 0.45
UPF3A-201ENST00000351487 APOBEC3AP31941 199 aaPredicted RBP17.86■□□□□ 0.45
UPF3A-201ENST00000351487 PKIAP61925 76 aa17.86■□□□□ 0.45
UPF3A-201ENST00000351487 ZNF90Q03938 601 aa17.86■□□□□ 0.45
UPF3A-201ENST00000351487 GBGT1Q8N5D6 347 aa17.86■□□□□ 0.45
UPF3A-201ENST00000351487 VKORC1Q9BQB6 163 aa17.86■□□□□ 0.45
UPF3A-201ENST00000351487 GCGP01275 180 aa17.86■□□□□ 0.45
UPF3A-201ENST00000351487 SLC25A2Q9BXI2 301 aa17.86■□□□□ 0.45
UPF3A-201ENST00000351487 V9GYV3 84 aa17.86■□□□□ 0.45
UPF3A-201ENST00000351487 B9A039 149 aa17.85■□□□□ 0.45
UPF3A-201ENST00000351487 SLC17A3O00476 420 aa17.85■□□□□ 0.45
UPF3A-201ENST00000351487 LGALS7P47929 136 aa17.85■□□□□ 0.45
UPF3A-201ENST00000351487 MRGPRG-AS1Q2M3A8 158 aa17.85■□□□□ 0.45
UPF3A-201ENST00000351487 THAP8Q8NA92 274 aa17.85■□□□□ 0.45
UPF3A-201ENST00000351487 TMEM133Q9H2Q1 129 aa17.85■□□□□ 0.45
UPF3A-201ENST00000351487 DNAJC4Q9NNZ3 241 aa17.85■□□□□ 0.45
UPF3A-201ENST00000351487 GATCO43716 136 aaKnown RBP17.84■□□□□ 0.45
UPF3A-201ENST00000351487 LGALS4P56470 323 aa17.84■□□□□ 0.45
UPF3A-201ENST00000351487 TNFRSF14Q92956 283 aa17.84■□□□□ 0.45
UPF3A-201ENST00000351487 POLEQ07864 2286 aa17.84■□□□□ 0.45
UPF3A-201ENST00000351487 SLC25A17O43808 307 aa17.84■□□□□ 0.45
UPF3A-201ENST00000351487 A0A1W2PPI3 338 aa17.83■□□□□ 0.45
UPF3A-201ENST00000351487 TCRBV4S1A1TA0A5B7 111 aa17.83■□□□□ 0.45
UPF3A-201ENST00000351487 ADMP35318 185 aa17.83■□□□□ 0.45
UPF3A-201ENST00000351487 ERVFC1-1P60608 527 aa17.83■□□□□ 0.45
UPF3A-201ENST00000351487 SELENOTP62341 195 aa17.83■□□□□ 0.45
UPF3A-201ENST00000351487 SSBP2P81877 361 aaPredicted RBP17.83■□□□□ 0.45
UPF3A-201ENST00000351487 RPEL1Q2QD12 228 aa17.83■□□□□ 0.45
UPF3A-201ENST00000351487 MORN5Q5VZ52 161 aa17.83■□□□□ 0.45
UPF3A-201ENST00000351487 LURAP1LQ8IV03 231 aa17.83■□□□□ 0.45
UPF3A-201ENST00000351487 TPSG1Q9NRR2 321 aa17.83■□□□□ 0.45
UPF3A-201ENST00000351487 IGKV1D-37A0A075B6S9 117 aa17.83■□□□□ 0.44
UPF3A-201ENST00000351487 TSTD3H0UI37 97 aa17.83■□□□□ 0.44
UPF3A-201ENST00000351487 FOXC1Q12948 553 aa17.83■□□□□ 0.44
UPF3A-201ENST00000351487 OR5I1Q13606 314 aa17.83■□□□□ 0.44
UPF3A-201ENST00000351487 MMD2Q8IY49 270 aa17.83■□□□□ 0.44
UPF3A-201ENST00000351487 OR1L4Q8NGR5 311 aa17.83■□□□□ 0.44
UPF3A-201ENST00000351487 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.82■□□□□ 0.44
UPF3A-201ENST00000351487 CD3EP07766 207 aa17.82■□□□□ 0.44
UPF3A-201ENST00000351487 PAX1P15863 534 aa17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms